RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
RFC4-211ENST00000460408 PCDHGC4Q9Y5F7 938 aa6.83□□□□□ -1.32
RFC4-211ENST00000460408 STAU1O95793 577 aaKnown RBP6.82□□□□□ -1.32
RFC4-211ENST00000460408 TBC1D9Q6ZT07 1266 aa6.82□□□□□ -1.32
RFC4-211ENST00000460408 NLRP8Q86W28 1048 aa6.82□□□□□ -1.32
RFC4-211ENST00000460408 C1orf216Q8TAB5 229 aa6.82□□□□□ -1.32
RFC4-211ENST00000460408 ZCCHC2Q9C0B9 1178 aaKnown RBP6.82□□□□□ -1.32
RFC4-211ENST00000460408 NOP53Q9NZM5 478 aaKnown RBP6.82□□□□□ -1.32
RFC4-211ENST00000460408 CHIC2Q9UKJ5 165 aa6.82□□□□□ -1.32
RFC4-211ENST00000460408 DOLKQ9UPQ8 538 aa6.82□□□□□ -1.32
RFC4-211ENST00000460408 NEURL1BA8MQ27 555 aa6.81□□□□□ -1.32
RFC4-211ENST00000460408 ATP4AP20648 1035 aa6.81□□□□□ -1.32
RFC4-211ENST00000460408 CHRNA4P43681 627 aa6.8□□□□□ -1.32
RFC4-211ENST00000460408 PLA2G4AP47712 749 aa6.8□□□□□ -1.32
RFC4-211ENST00000460408 FAM182BQ5T319 152 aa6.8□□□□□ -1.32
RFC4-211ENST00000460408 PROSER2Q86WR7 435 aaPredicted RBP6.8□□□□□ -1.32
RFC4-211ENST00000460408 C1orf115Q9H7X2 142 aa6.8□□□□□ -1.32
RFC4-211ENST00000460408 AVENQ9NQS1 362 aaPredicted RBP6.8□□□□□ -1.32
RFC4-211ENST00000460408 ATXN7O15265 892 aaPredicted RBP6.79□□□□□ -1.32
RFC4-211ENST00000460408 ITGB7P26010 798 aa6.79□□□□□ -1.32
RFC4-211ENST00000460408 SCNN1DP51172 638 aa6.79□□□□□ -1.32
RFC4-211ENST00000460408 EIF4G2P78344 907 aaKnown RBP eCLIP6.79□□□□□ -1.32
RFC4-211ENST00000460408 CHSY3Q70JA7 882 aa6.79□□□□□ -1.32
RFC4-211ENST00000460408 SIRT1Q96EB6 747 aa6.79□□□□□ -1.32
RFC4-211ENST00000460408 GDPD2Q9HCC8 539 aa6.79□□□□□ -1.32
RFC4-211ENST00000460408 KLF15Q9UIH9 416 aa6.79□□□□□ -1.32
RFC4-211ENST00000460408 HCN2Q9UL51 889 aa6.79□□□□□ -1.32
RFC4-211ENST00000460408 RAD21O60216 631 aa6.78□□□□□ -1.32
RFC4-211ENST00000460408 INHAP05111 366 aa6.78□□□□□ -1.32
RFC4-211ENST00000460408 ADH6P28332 368 aa6.78□□□□□ -1.32
RFC4-211ENST00000460408 TNP2Q05952 138 aa6.78□□□□□ -1.32
RFC4-211ENST00000460408 SLFNL1Q499Z3 407 aa6.78□□□□□ -1.32
RFC4-211ENST00000460408 NIFKQ9BYG3 293 aaKnown RBP6.78□□□□□ -1.32
RFC4-211ENST00000460408 TBC1D2BQ9UPU7 963 aa6.78□□□□□ -1.32
RFC4-211ENST00000460408 MAPTP10636 758 aaKnown RBP6.77□□□□□ -1.33
RFC4-211ENST00000460408 OXLD1Q5BKU9 147 aa6.77□□□□□ -1.33
RFC4-211ENST00000460408 FCHSD1Q86WN1 690 aa6.77□□□□□ -1.33
RFC4-211ENST00000460408 ZNF295-AS1Q8N0V1 137 aa6.77□□□□□ -1.33
RFC4-211ENST00000460408 A0A1W2PNR3 127 aa6.76□□□□□ -1.33
RFC4-211ENST00000460408 SMTNP53814 917 aa6.76□□□□□ -1.33
RFC4-211ENST00000460408 GDF10P55107 478 aa6.76□□□□□ -1.33
RFC4-211ENST00000460408 IRF5Q13568 498 aa6.76□□□□□ -1.33
RFC4-211ENST00000460408 AIDAQ96BJ3 306 aa6.76□□□□□ -1.33
RFC4-211ENST00000460408 DCDC2BA2VCK2 349 aa6.75□□□□□ -1.33
RFC4-211ENST00000460408 ARID3CA6NKF2 412 aa6.75□□□□□ -1.33
RFC4-211ENST00000460408 CD33P20138 364 aa6.75□□□□□ -1.33
RFC4-211ENST00000460408 TRIM11Q96F44 468 aa6.75□□□□□ -1.33
RFC4-211ENST00000460408 PSMG3-AS1Q96PY0 264 aa6.75□□□□□ -1.33
RFC4-211ENST00000460408 KHNYNO15037 678 aaKnown RBP6.74□□□□□ -1.33
RFC4-211ENST00000460408 FAM157BP0CG42 384 aa6.74□□□□□ -1.33
RFC4-211ENST00000460408 DOC2BQ14184 412 aa6.74□□□□□ -1.33
RFC4-211ENST00000460408 MTFR1Q15390 333 aa6.74□□□□□ -1.33
RFC4-211ENST00000460408 NBPF1Q3BBV0 1214 aa6.74□□□□□ -1.33
RFC4-211ENST00000460408 ZNF468Q5VIY5 522 aaPredicted RBP6.74□□□□□ -1.33
RFC4-211ENST00000460408 SLC4A9Q96Q91 983 aa6.74□□□□□ -1.33
RFC4-211ENST00000460408 SEMA6BQ9H3T3 888 aa6.74□□□□□ -1.33
RFC4-211ENST00000460408 ZDHHC3Q9NYG2 299 aa6.74□□□□□ -1.33
RFC4-211ENST00000460408 IQSEC3Q9UPP2 1182 aaPredicted RBP6.74□□□□□ -1.33
RFC4-211ENST00000460408 CDK2AP1O14519 115 aa6.73□□□□□ -1.33
RFC4-211ENST00000460408 SPATA31C1P0DKV0 1188 aa6.73□□□□□ -1.33
RFC4-211ENST00000460408 ABL2P42684 1182 aa6.73□□□□□ -1.33
RFC4-211ENST00000460408 MAP7D1Q3KQU3 841 aa6.73□□□□□ -1.33
RFC4-211ENST00000460408 ARSJQ5FYB0 599 aaPredicted RBP6.73□□□□□ -1.33
RFC4-211ENST00000460408 SAMD5Q5TGI4 173 aa6.73□□□□□ -1.33
RFC4-211ENST00000460408 ZIC5Q96T25 663 aa6.73□□□□□ -1.33
RFC4-211ENST00000460408 PLVAPQ9BX97 442 aa6.73□□□□□ -1.33
RFC4-211ENST00000460408 PRM3Q9NNZ6 103 aa6.73□□□□□ -1.33
RFC4-211ENST00000460408 TMEM229AB2RXF0 380 aa6.72□□□□□ -1.33
RFC4-211ENST00000460408 TATP17735 454 aaPredicted RBP6.72□□□□□ -1.33
RFC4-211ENST00000460408 GATA4P43694 442 aa6.72□□□□□ -1.33
RFC4-211ENST00000460408 LAMC2Q13753 1193 aa6.72□□□□□ -1.33
RFC4-211ENST00000460408 A6NJY4 79 aa6.71□□□□□ -1.34
RFC4-211ENST00000460408 EFSO43281 561 aa6.71□□□□□ -1.34
RFC4-211ENST00000460408 PCBP4P57723 403 aaKnown RBP6.71□□□□□ -1.34
RFC4-211ENST00000460408 PLPP7Q8NBV4 271 aa6.71□□□□□ -1.34
RFC4-211ENST00000460408 MDFIQ99750 246 aa6.71□□□□□ -1.34
RFC4-211ENST00000460408 MARK1Q9P0L2 795 aa6.71□□□□□ -1.34
RFC4-211ENST00000460408 SERTAD1Q9UHV2 236 aa6.71□□□□□ -1.34
RFC4-211ENST00000460408 ZNF777Q9ULD5 760 aaPredicted RBP6.71□□□□□ -1.34
RFC4-211ENST00000460408 PRR12Q9ULL5 1215 aa6.71□□□□□ -1.34
RFC4-211ENST00000460408 ELOA3CA0A087WX78 387 aaPredicted RBP6.7□□□□□ -1.34
RFC4-211ENST00000460408 ELOA3DA6NLF2 546 aaPredicted RBP6.7□□□□□ -1.34
RFC4-211ENST00000460408 POM121CA8CG34 1229 aa6.7□□□□□ -1.34
RFC4-211ENST00000460408 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.7□□□□□ -1.34
RFC4-211ENST00000460408 ELOA3BQ3SY89 546 aa6.7□□□□□ -1.34
RFC4-211ENST00000460408 ZMYM1Q5SVZ6 1142 aa6.7□□□□□ -1.34
RFC4-211ENST00000460408 ELOA3Q8NG57 546 aa6.7□□□□□ -1.34
RFC4-211ENST00000460408 KRTAP9-2Q9BYQ4 174 aa6.7□□□□□ -1.34
RFC4-211ENST00000460408 STRN4Q9NRL3 753 aa6.7□□□□□ -1.34
RFC4-211ENST00000460408 USP3Q9Y6I4 520 aa6.7□□□□□ -1.34
RFC4-211ENST00000460408 VAC14Q08AM6 782 aa6.69□□□□□ -1.34
RFC4-211ENST00000460408 RSPO4Q2I0M5 234 aaPredicted RBP6.69□□□□□ -1.34
RFC4-211ENST00000460408 CABP1Q9NZU7 370 aa6.69□□□□□ -1.34
RFC4-211ENST00000460408 GJA3Q9Y6H8 435 aa6.69□□□□□ -1.34
RFC4-211ENST00000460408 SPDYE3A6NKU9 549 aa6.68□□□□□ -1.34
RFC4-211ENST00000460408 NKAPLQ5M9Q1 402 aa6.68□□□□□ -1.34
RFC4-211ENST00000460408 WWC1Q8IX03 1113 aa6.68□□□□□ -1.34
RFC4-211ENST00000460408 CCDC82Q8N4S0 544 aa6.68□□□□□ -1.34
RFC4-211ENST00000460408 PCDHGA11Q9Y5H2 935 aa6.68□□□□□ -1.34
RFC4-211ENST00000460408 ALAS2P22557 587 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms