RNA–Protein interactions for RNA: ENST00000452413.1

KCTD3-203, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 3

Gene KCTD3, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-203ENST00000452413 MSL1Q68DK7 614 aa12.86□□□□□ -0.35
KCTD3-203ENST00000452413 PDGFDQ9GZP0 370 aaPredicted RBP12.86□□□□□ -0.35
KCTD3-203ENST00000452413 BABAM1Q9NWV8 329 aa12.86□□□□□ -0.35
KCTD3-203ENST00000452413 MRC1P22897 1456 aa12.85□□□□□ -0.35
KCTD3-203ENST00000452413 CYP19A1P11511 503 aaPredicted RBP12.85□□□□□ -0.35
KCTD3-203ENST00000452413 EIF2S2P20042 333 aaKnown RBP12.85□□□□□ -0.35
KCTD3-203ENST00000452413 MIER1Q8N108 512 aa12.85□□□□□ -0.35
KCTD3-203ENST00000452413 NGEFQ8N5V2 710 aa12.85□□□□□ -0.35
KCTD3-203ENST00000452413 SLC4A9Q96Q91 983 aa12.85□□□□□ -0.35
KCTD3-203ENST00000452413 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
KCTD3-203ENST00000452413 LY75O60449 1722 aa12.85□□□□□ -0.35
KCTD3-203ENST00000452413 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
KCTD3-203ENST00000452413 NLGN1Q8N2Q7 840 aa12.84□□□□□ -0.35
KCTD3-203ENST00000452413 ARHGEF1Q92888 912 aaKnown RBP12.84□□□□□ -0.35
KCTD3-203ENST00000452413 C5P01031 1676 aa12.83□□□□□ -0.35
KCTD3-203ENST00000452413 CFAP44Q96MT7 982 aa12.83□□□□□ -0.36
KCTD3-203ENST00000452413 CHMP4AQ9BY43 222 aa12.83□□□□□ -0.36
KCTD3-203ENST00000452413 USP16Q9Y5T5 823 aa12.83□□□□□ -0.36
KCTD3-203ENST00000452413 C4BP0C0L5 1744 aa12.82□□□□□ -0.36
KCTD3-203ENST00000452413 A1BGP04217 495 aa12.82□□□□□ -0.36
KCTD3-203ENST00000452413 MYL6BP14649 208 aa12.82□□□□□ -0.36
KCTD3-203ENST00000452413 EIF4A1P60842 406 aaKnown RBP12.82□□□□□ -0.36
KCTD3-203ENST00000452413 INTS5Q6P9B9 1019 aaKnown RBP12.82□□□□□ -0.36
KCTD3-203ENST00000452413 NECTIN2Q92692 538 aa12.82□□□□□ -0.36
KCTD3-203ENST00000452413 IFT57Q9NWB7 429 aa12.82□□□□□ -0.36
KCTD3-203ENST00000452413 ZBTB1Q9Y2K1 713 aa12.82□□□□□ -0.36
KCTD3-203ENST00000452413 PARP3Q9Y6F1 533 aa12.82□□□□□ -0.36
KCTD3-203ENST00000452413 KIF6Q6ZMV9 814 aa12.81□□□□□ -0.36
KCTD3-203ENST00000452413 WWC1Q8IX03 1113 aa12.81□□□□□ -0.36
KCTD3-203ENST00000452413 PRAMEF22A3QJZ6 481 aa12.8□□□□□ -0.36
KCTD3-203ENST00000452413 ELL2O00472 640 aaPredicted RBP12.8□□□□□ -0.36
KCTD3-203ENST00000452413 CHL1O00533 1208 aa12.8□□□□□ -0.36
KCTD3-203ENST00000452413 GIGYF1O75420 1035 aaPredicted RBP12.8□□□□□ -0.36
KCTD3-203ENST00000452413 IL6STP40189 918 aaPredicted RBP12.8□□□□□ -0.36
KCTD3-203ENST00000452413 PIP4K2AP48426 406 aaPredicted RBP12.8□□□□□ -0.36
KCTD3-203ENST00000452413 CCDC27Q2M243 656 aa12.8□□□□□ -0.36
KCTD3-203ENST00000452413 USPL1Q5W0Q7 1092 aa12.8□□□□□ -0.36
KCTD3-203ENST00000452413 DZIP3Q86Y13 1208 aaKnown RBP12.8□□□□□ -0.36
KCTD3-203ENST00000452413 MYH16Q9H6N6 1097 aa12.8□□□□□ -0.36
KCTD3-203ENST00000452413 TBC1D2BQ9UPU7 963 aa12.8□□□□□ -0.36
KCTD3-203ENST00000452413 ZNF652Q9Y2D9 606 aa12.8□□□□□ -0.36
KCTD3-203ENST00000452413 KCPQ6ZWJ8 1503 aa12.79□□□□□ -0.36
KCTD3-203ENST00000452413 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
KCTD3-203ENST00000452413 HDGFL1Q5TGJ6 251 aa12.79□□□□□ -0.36
KCTD3-203ENST00000452413 BICDL1Q6ZP65 573 aa12.79□□□□□ -0.36
KCTD3-203ENST00000452413 PELP1Q8IZL8 1130 aaKnown RBP12.79□□□□□ -0.36
KCTD3-203ENST00000452413 MBIPQ9NS73 344 aa12.79□□□□□ -0.36
KCTD3-203ENST00000452413 SRP68Q9UHB9 627 aaKnown RBP12.79□□□□□ -0.36
KCTD3-203ENST00000452413 PAPPAQ13219 1627 aa12.79□□□□□ -0.36
KCTD3-203ENST00000452413 ADAMTS7Q9UKP4 1686 aa12.79□□□□□ -0.36
KCTD3-203ENST00000452413 COL15A1P39059 1388 aa12.79□□□□□ -0.36
KCTD3-203ENST00000452413 MMP10P09238 476 aa12.78□□□□□ -0.36
KCTD3-203ENST00000452413 WDR63Q8IWG1 891 aa12.78□□□□□ -0.36
KCTD3-203ENST00000452413 NARFQ9UHQ1 456 aa12.78□□□□□ -0.36
KCTD3-203ENST00000452413 SOS1Q07889 1333 aaPredicted RBP12.78□□□□□ -0.36
KCTD3-203ENST00000452413 VIRMAQ69YN4 1812 aaKnown RBP12.77□□□□□ -0.37
KCTD3-203ENST00000452413 GTF2E1P29083 439 aaPredicted RBP12.77□□□□□ -0.37
KCTD3-203ENST00000452413 AIMP1Q12904 312 aaKnown RBP12.77□□□□□ -0.37
KCTD3-203ENST00000452413 DUSP27Q5VZP5 1158 aa12.77□□□□□ -0.37
KCTD3-203ENST00000452413 TSR2Q969E8 191 aaKnown RBP12.77□□□□□ -0.37
KCTD3-203ENST00000452413 STK31Q9BXU1 1019 aa12.77□□□□□ -0.37
KCTD3-203ENST00000452413 DLG5Q8TDM6 1919 aa12.77□□□□□ -0.37
KCTD3-203ENST00000452413 USP42Q9H9J4 1324 aaKnown RBP12.77□□□□□ -0.37
KCTD3-203ENST00000452413 GYS1P13807 737 aa12.76□□□□□ -0.37
KCTD3-203ENST00000452413 EIF5P55010 431 aaKnown RBP12.76□□□□□ -0.37
KCTD3-203ENST00000452413 AMIGO3Q86WK7 504 aa12.76□□□□□ -0.37
KCTD3-203ENST00000452413 SETDB2Q96T68 719 aa12.76□□□□□ -0.37
KCTD3-203ENST00000452413 FHDC1Q9C0D6 1143 aaPredicted RBP12.76□□□□□ -0.37
KCTD3-203ENST00000452413 PTGER2P43116 358 aa12.75□□□□□ -0.37
KCTD3-203ENST00000452413 IL16Q14005 1332 aa12.75□□□□□ -0.37
KCTD3-203ENST00000452413 ZNF831Q5JPB2 1677 aa12.75□□□□□ -0.37
KCTD3-203ENST00000452413 CCDC30Q5VVM6 783 aa12.75□□□□□ -0.37
KCTD3-203ENST00000452413 TAF1LQ8IZX4 1826 aa12.75□□□□□ -0.37
KCTD3-203ENST00000452413 DBF4Q9UBU7 674 aaPredicted RBP12.75□□□□□ -0.37
KCTD3-203ENST00000452413 ERBB4Q15303 1308 aa12.74□□□□□ -0.37
KCTD3-203ENST00000452413 HOXB7P09629 217 aa12.74□□□□□ -0.37
KCTD3-203ENST00000452413 HNRNPUQ00839 825 aaKnown RBP eCLIP12.74□□□□□ -0.37
KCTD3-203ENST00000452413 FKBP8Q14318 412 aa12.74□□□□□ -0.37
KCTD3-203ENST00000452413 KRT24Q2M2I5 525 aa12.74□□□□□ -0.37
KCTD3-203ENST00000452413 FAM177BA6PVY3 158 aa12.73□□□□□ -0.37
KCTD3-203ENST00000452413 GPR162Q16538 588 aa12.73□□□□□ -0.37
KCTD3-203ENST00000452413 TWISTNBQ3B726 338 aaPredicted RBP12.73□□□□□ -0.37
KCTD3-203ENST00000452413 ZBTB3Q9H5J0 574 aa12.73□□□□□ -0.37
KCTD3-203ENST00000452413 SIPA1L3O60292 1781 aaPredicted RBP12.73□□□□□ -0.37
KCTD3-203ENST00000452413 TJP1Q07157 1748 aa12.73□□□□□ -0.37
KCTD3-203ENST00000452413 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
KCTD3-203ENST00000452413 DDX58O95786 925 aaKnown RBP12.72□□□□□ -0.37
KCTD3-203ENST00000452413 ZNF853P0CG23 659 aa12.72□□□□□ -0.37
KCTD3-203ENST00000452413 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
KCTD3-203ENST00000452413 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
KCTD3-203ENST00000452413 SYT17Q9BSW7 474 aa12.72□□□□□ -0.37
KCTD3-203ENST00000452413 DDX21Q9NR30 783 aaKnown RBP eCLIP12.72□□□□□ -0.37
KCTD3-203ENST00000452413 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
KCTD3-203ENST00000452413 CHPF2Q9P2E5 772 aa12.72□□□□□ -0.37
KCTD3-203ENST00000452413 NIP7Q9Y221 180 aaKnown RBP eCLIP12.72□□□□□ -0.37
KCTD3-203ENST00000452413 CASZ1Q86V15 1759 aa12.71□□□□□ -0.37
KCTD3-203ENST00000452413 UBR2Q8IWV8 1755 aa12.71□□□□□ -0.37
KCTD3-203ENST00000452413 COL5A3P25940 1745 aaPredicted RBP12.71□□□□□ -0.37
KCTD3-203ENST00000452413 E9PSI1 815 aa12.71□□□□□ -0.37
KCTD3-203ENST00000452413 ANXA1P04083 346 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms