RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 GOLGA6L1Q8N7Z2 621 aa6.36□□□□□ -1.39
HMGB3P22-202ENST00000451823 MKL2Q9ULH7 1088 aa6.36□□□□□ -1.39
HMGB3P22-202ENST00000451823 PCDHGC4Q9Y5F7 938 aa6.36□□□□□ -1.39
HMGB3P22-202ENST00000451823 A0A1W2PNR3 127 aa6.35□□□□□ -1.39
HMGB3P22-202ENST00000451823 KRBA1A5PL33 1030 aa6.35□□□□□ -1.39
HMGB3P22-202ENST00000451823 CDK2AP1O14519 115 aa6.35□□□□□ -1.39
HMGB3P22-202ENST00000451823 PRKCSHP14314 528 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P22-202ENST00000451823 A6NJY4 79 aa6.34□□□□□ -1.39
HMGB3P22-202ENST00000451823 TMEM229AB2RXF0 380 aa6.34□□□□□ -1.39
HMGB3P22-202ENST00000451823 ATXN7O15265 892 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P22-202ENST00000451823 FIGNL1Q6PIW4 674 aa6.34□□□□□ -1.39
HMGB3P22-202ENST00000451823 SLC4A9Q96Q91 983 aa6.34□□□□□ -1.39
HMGB3P22-202ENST00000451823 SUV39H2Q9H5I1 410 aa6.34□□□□□ -1.39
HMGB3P22-202ENST00000451823 DNAAF2Q9NVR5 837 aaKnown RBP6.34□□□□□ -1.39
HMGB3P22-202ENST00000451823 CABP1Q9NZU7 370 aa6.34□□□□□ -1.39
HMGB3P22-202ENST00000451823 PCDHGA11Q9Y5H2 935 aa6.34□□□□□ -1.39
HMGB3P22-202ENST00000451823 PARP3Q9Y6F1 533 aa6.34□□□□□ -1.39
HMGB3P22-202ENST00000451823 NEURL1BA8MQ27 555 aa6.33□□□□□ -1.4
HMGB3P22-202ENST00000451823 PIK3CDO00329 1044 aa6.33□□□□□ -1.4
HMGB3P22-202ENST00000451823 COL8A1P27658 744 aa6.33□□□□□ -1.4
HMGB3P22-202ENST00000451823 NEUROD1Q13562 356 aa6.33□□□□□ -1.4
HMGB3P22-202ENST00000451823 NLRP8Q86W28 1048 aa6.33□□□□□ -1.4
HMGB3P22-202ENST00000451823 C1orf216Q8TAB5 229 aa6.33□□□□□ -1.4
HMGB3P22-202ENST00000451823 ZIC5Q96T25 663 aa6.33□□□□□ -1.4
HMGB3P22-202ENST00000451823 RSF1Q96T23 1441 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P22-202ENST00000451823 KHNYNO15037 678 aaKnown RBP6.32□□□□□ -1.4
HMGB3P22-202ENST00000451823 ADAM23O75077 832 aa6.32□□□□□ -1.4
HMGB3P22-202ENST00000451823 PROCP04070 461 aa6.32□□□□□ -1.4
HMGB3P22-202ENST00000451823 MAPTP10636 758 aaKnown RBP6.32□□□□□ -1.4
HMGB3P22-202ENST00000451823 SKIP12755 728 aa6.32□□□□□ -1.4
HMGB3P22-202ENST00000451823 HOXB4P17483 251 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P22-202ENST00000451823 ATP4AP20648 1035 aa6.32□□□□□ -1.4
HMGB3P22-202ENST00000451823 TNP2Q05952 138 aa6.32□□□□□ -1.4
HMGB3P22-202ENST00000451823 KLF15Q9UIH9 416 aa6.32□□□□□ -1.4
HMGB3P22-202ENST00000451823 HCN2Q9UL51 889 aa6.32□□□□□ -1.4
HMGB3P22-202ENST00000451823 USP3Q9Y6I4 520 aa6.32□□□□□ -1.4
HMGB3P22-202ENST00000451823 EPXP11678 715 aa6.31□□□□□ -1.4
HMGB3P22-202ENST00000451823 SOX11P35716 441 aa6.31□□□□□ -1.4
HMGB3P22-202ENST00000451823 GRIN2CQ14957 1233 aa6.31□□□□□ -1.4
HMGB3P22-202ENST00000451823 MTFR1Q15390 333 aa6.31□□□□□ -1.4
HMGB3P22-202ENST00000451823 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB3P22-202ENST00000451823 ALG2Q9H553 416 aa6.31□□□□□ -1.4
HMGB3P22-202ENST00000451823 IQSEC3Q9UPP2 1182 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P22-202ENST00000451823 GJA3Q9Y6H8 435 aa6.31□□□□□ -1.4
HMGB3P22-202ENST00000451823 RB1CC1Q8TDY2 1594 aa6.31□□□□□ -1.4
HMGB3P22-202ENST00000451823 DCDC2BA2VCK2 349 aa6.3□□□□□ -1.4
HMGB3P22-202ENST00000451823 ARAFP10398 606 aa6.3□□□□□ -1.4
HMGB3P22-202ENST00000451823 TATP17735 454 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P22-202ENST00000451823 CD33P20138 364 aa6.3□□□□□ -1.4
HMGB3P22-202ENST00000451823 NBPF1Q3BBV0 1214 aa6.3□□□□□ -1.4
HMGB3P22-202ENST00000451823 BICDL1Q6ZP65 573 aa6.3□□□□□ -1.4
HMGB3P22-202ENST00000451823 SLCO4C1Q6ZQN7 724 aa6.3□□□□□ -1.4
HMGB3P22-202ENST00000451823 ZNF295-AS1Q8N0V1 137 aa6.3□□□□□ -1.4
HMGB3P22-202ENST00000451823 COG6Q9Y2V7 657 aa6.3□□□□□ -1.4
HMGB3P22-202ENST00000451823 BACH1O14867 736 aa6.29□□□□□ -1.4
HMGB3P22-202ENST00000451823 FURINP09958 794 aa6.29□□□□□ -1.4
HMGB3P22-202ENST00000451823 BAG6P46379 1132 aa6.29□□□□□ -1.4
HMGB3P22-202ENST00000451823 PCBP4P57723 403 aaKnown RBP6.29□□□□□ -1.4
HMGB3P22-202ENST00000451823 EML3Q32P44 896 aa6.29□□□□□ -1.4
HMGB3P22-202ENST00000451823 PRR12Q9ULL5 1215 aa6.29□□□□□ -1.4
HMGB3P22-202ENST00000451823 NOD1Q9Y239 953 aa6.29□□□□□ -1.4
HMGB3P22-202ENST00000451823 C1QTNF9BB2RNN3 333 aa6.28□□□□□ -1.4
HMGB3P22-202ENST00000451823 NOS2P35228 1153 aa6.28□□□□□ -1.4
HMGB3P22-202ENST00000451823 PSME1Q06323 249 aa6.28□□□□□ -1.4
HMGB3P22-202ENST00000451823 MCM6Q14566 821 aa6.28□□□□□ -1.4
HMGB3P22-202ENST00000451823 DEPDC4Q8N2C3 294 aa6.28□□□□□ -1.4
HMGB3P22-202ENST00000451823 L3MBTL2Q969R5 705 aa6.28□□□□□ -1.4
HMGB3P22-202ENST00000451823 STRN4Q9NRL3 753 aa6.28□□□□□ -1.4
HMGB3P22-202ENST00000451823 GNB5O14775 395 aa6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 LZTS3O60299 673 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 TXLNAP40222 546 aa6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 GTF2IP78347 998 aa6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 NCOA4Q13772 614 aa6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 TBCELQ5QJ74 424 aa6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 FAM182BQ5T319 152 aa6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 CHSY3Q70JA7 882 aa6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 ALYREFQ86V81 257 aaKnown RBP6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 FCHSD1Q86WN1 690 aa6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 TNS4Q8IZW8 715 aa6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 NEUROD4Q9HD90 331 aa6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 ZDHHC3Q9NYG2 299 aa6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 MARK1Q9P0L2 795 aa6.27□□□□□ -1.41
HMGB3P22-202ENST00000451823 K7ELQ4 463 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P22-202ENST00000451823 PIK3R2O00459 728 aa6.26□□□□□ -1.41
HMGB3P22-202ENST00000451823 ZBTB7BO15156 539 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P22-202ENST00000451823 ADH6P28332 368 aa6.26□□□□□ -1.41
HMGB3P22-202ENST00000451823 LRRC69Q6ZNQ3 347 aa6.26□□□□□ -1.41
HMGB3P22-202ENST00000451823 ZDHHC1Q8WTX9 485 aa6.26□□□□□ -1.41
HMGB3P22-202ENST00000451823 POM121Q96HA1 1249 aa6.26□□□□□ -1.41
HMGB3P22-202ENST00000451823 ZNF358Q9NW07 568 aa6.26□□□□□ -1.41
HMGB3P22-202ENST00000451823 SCHIP1Q9P0W5 487 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P22-202ENST00000451823 GTF3C3Q9Y5Q9 886 aa6.26□□□□□ -1.41
HMGB3P22-202ENST00000451823 CENPBP07199 599 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P22-202ENST00000451823 DGKGP49619 791 aa6.25□□□□□ -1.41
HMGB3P22-202ENST00000451823 TEAD4Q15561 434 aa6.25□□□□□ -1.41
HMGB3P22-202ENST00000451823 CD163Q86VB7 1156 aa6.25□□□□□ -1.41
HMGB3P22-202ENST00000451823 WWC1Q8IX03 1113 aa6.25□□□□□ -1.41
HMGB3P22-202ENST00000451823 ZNF232Q9UNY5 417 aa6.25□□□□□ -1.41
HMGB3P22-202ENST00000451823 WRNQ14191 1432 aaPredicted RBP eCLIP6.25□□□□□ -1.41
HMGB3P22-202ENST00000451823 ALAS2P22557 587 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms