RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 MKRN1Q9UHC7 482 aaKnown RBP13.4□□□□□ -0.26
SHANK2-211ENST00000449833 FSD2A1L4K1 749 aa13.4□□□□□ -0.26
SHANK2-211ENST00000449833 SATB2Q9UPW6 733 aa13.4□□□□□ -0.26
SHANK2-211ENST00000449833 ANAPC4Q9UJX5 808 aa13.4□□□□□ -0.26
SHANK2-211ENST00000449833 PDZRN3Q9UPQ7 1066 aa13.4□□□□□ -0.26
SHANK2-211ENST00000449833 RLBP1P12271 317 aa13.39□□□□□ -0.27
SHANK2-211ENST00000449833 CKAP4Q07065 602 aaKnown RBP13.39□□□□□ -0.27
SHANK2-211ENST00000449833 ZSCAN25Q6NSZ9 544 aa13.39□□□□□ -0.27
SHANK2-211ENST00000449833 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
SHANK2-211ENST00000449833 CTCFLQ8NI51 663 aaPredicted RBP13.39□□□□□ -0.27
SHANK2-211ENST00000449833 CTAGE5O15320 804 aa13.39□□□□□ -0.27
SHANK2-211ENST00000449833 CACNA2D4Q7Z3S7 1137 aa13.39□□□□□ -0.27
SHANK2-211ENST00000449833 CASQ2O14958 399 aaPredicted RBP13.39□□□□□ -0.27
SHANK2-211ENST00000449833 BLOC1S2Q6QNY1 142 aa13.39□□□□□ -0.27
SHANK2-211ENST00000449833 CCDC114Q96M63 670 aa13.39□□□□□ -0.27
SHANK2-211ENST00000449833 TSG101Q99816 390 aa13.39□□□□□ -0.27
SHANK2-211ENST00000449833 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
SHANK2-211ENST00000449833 HLTFQ14527 1009 aaKnown RBP eCLIP13.38□□□□□ -0.271e-6■■■□□ 17.8
SHANK2-211ENST00000449833 C16orf45Q96MC5 204 aaPredicted RBP13.38□□□□□ -0.27
SHANK2-211ENST00000449833 NBPF11Q86T75 865 aa13.38□□□□□ -0.27
SHANK2-211ENST00000449833 CCDC65Q8IXS2 484 aa13.38□□□□□ -0.27
SHANK2-211ENST00000449833 NUP88Q99567 741 aaPredicted RBP13.38□□□□□ -0.27
SHANK2-211ENST00000449833 MAP3K9P80192 1104 aa13.38□□□□□ -0.27
SHANK2-211ENST00000449833 NLRP5P59047 1200 aa13.38□□□□□ -0.27
SHANK2-211ENST00000449833 PHLDB2Q86SQ0 1253 aa13.38□□□□□ -0.27
SHANK2-211ENST00000449833 PDRG1Q9NUG6 133 aa13.38□□□□□ -0.27
SHANK2-211ENST00000449833 MINK1Q8N4C8 1332 aaPredicted RBP13.38□□□□□ -0.27
SHANK2-211ENST00000449833 SMG6Q86US8 1419 aaKnown RBP13.38□□□□□ -0.27
SHANK2-211ENST00000449833 SCAPERQ9BY12 1400 aa13.38□□□□□ -0.27
SHANK2-211ENST00000449833 HMOX1P09601 288 aa13.38□□□□□ -0.27
SHANK2-211ENST00000449833 CEP135Q66GS9 1140 aa13.38□□□□□ -0.27
SHANK2-211ENST00000449833 BUB1BO60566 1050 aaPredicted RBP13.38□□□□□ -0.27
SHANK2-211ENST00000449833 TERF1P54274 439 aa13.38□□□□□ -0.27
SHANK2-211ENST00000449833 KIF4AO95239 1232 aa13.37□□□□□ -0.27
SHANK2-211ENST00000449833 ATP2B2Q01814 1243 aa13.37□□□□□ -0.27
SHANK2-211ENST00000449833 LIMCH1Q9UPQ0 1083 aa13.37□□□□□ -0.27
SHANK2-211ENST00000449833 CCDC150Q8NCX0 1101 aa13.37□□□□□ -0.27
SHANK2-211ENST00000449833 CCDC7Q96M83 1385 aa13.37□□□□□ -0.27
SHANK2-211ENST00000449833 RFC1P35251 1148 aaPredicted RBP13.37□□□□□ -0.27
SHANK2-211ENST00000449833 GCKP35557 465 aa13.37□□□□□ -0.27
SHANK2-211ENST00000449833 MIER3Q7Z3K6 550 aa13.37□□□□□ -0.27
SHANK2-211ENST00000449833 CCT4P50991 539 aaKnown RBP13.37□□□□□ -0.27
SHANK2-211ENST00000449833 NBPF8Q3BBV2 869 aa13.37□□□□□ -0.27
SHANK2-211ENST00000449833 CCDC155Q8N6L0 562 aa13.37□□□□□ -0.27
SHANK2-211ENST00000449833 HOMER2Q9NSB8 354 aa13.37□□□□□ -0.27
SHANK2-211ENST00000449833 CTNNBL1Q8WYA6 563 aaPredicted RBP13.36□□□□□ -0.27
SHANK2-211ENST00000449833 STMN2Q93045 179 aa13.36□□□□□ -0.27
SHANK2-211ENST00000449833 SMARCA2P51531 1590 aa13.36□□□□□ -0.27
SHANK2-211ENST00000449833 CAMK4Q16566 473 aa13.36□□□□□ -0.27
SHANK2-211ENST00000449833 CTAGE6Q86UF2 777 aa13.36□□□□□ -0.27
SHANK2-211ENST00000449833 RAPGEF4Q8WZA2 1011 aa13.36□□□□□ -0.27
SHANK2-211ENST00000449833 CCDC40Q4G0X9 1142 aa13.36□□□□□ -0.27
SHANK2-211ENST00000449833 DDX27Q96GQ7 796 aaKnown RBP13.36□□□□□ -0.27
SHANK2-211ENST00000449833 SNW1Q13573 536 aaKnown RBP13.36□□□□□ -0.27
SHANK2-211ENST00000449833 MVPQ14764 893 aaKnown RBP13.36□□□□□ -0.27
SHANK2-211ENST00000449833 CTNNA3Q9UI47 895 aa13.36□□□□□ -0.27
SHANK2-211ENST00000449833 SSBP05455 408 aaKnown RBP eCLIP13.36□□□□□ -0.27
SHANK2-211ENST00000449833 PCK1P35558 622 aa13.36□□□□□ -0.27
SHANK2-211ENST00000449833 MAATS1Q7Z4T9 603 aa13.36□□□□□ -0.27
SHANK2-211ENST00000449833 RPUSD2Q8IZ73 545 aaKnown RBP13.35□□□□□ -0.27
SHANK2-211ENST00000449833 PIP4K2BP78356 416 aa13.35□□□□□ -0.27
SHANK2-211ENST00000449833 UVSSAQ2YD98 709 aa13.35□□□□□ -0.27
SHANK2-211ENST00000449833 CNNM1Q9NRU3 951 aa13.35□□□□□ -0.27
SHANK2-211ENST00000449833 IKBKGQ9Y6K9 419 aa13.35□□□□□ -0.27
SHANK2-211ENST00000449833 YEATS4O95619 227 aa13.35□□□□□ -0.27
SHANK2-211ENST00000449833 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.35□□□□□ -0.274e-6■□□□□ 8.1
SHANK2-211ENST00000449833 CHMP2AO43633 222 aa13.35□□□□□ -0.27
SHANK2-211ENST00000449833 KIF1CO43896 1103 aaKnown RBP13.35□□□□□ -0.27
SHANK2-211ENST00000449833 PPFIA3O75145 1194 aa13.35□□□□□ -0.27
SHANK2-211ENST00000449833 TSNARE1Q96NA8 513 aa13.35□□□□□ -0.27
SHANK2-211ENST00000449833 SCAND2PQ9GZW5 306 aaPredicted RBP13.35□□□□□ -0.27
SHANK2-211ENST00000449833 MYO10Q9HD67 2058 aa13.35□□□□□ -0.27
SHANK2-211ENST00000449833 CTNNA2P26232 953 aa13.34□□□□□ -0.27
SHANK2-211ENST00000449833 AKNAQ7Z591 1439 aa13.34□□□□□ -0.27
SHANK2-211ENST00000449833 MAP4K4O95819 1239 aaPredicted RBP13.34□□□□□ -0.27
SHANK2-211ENST00000449833 CASTP20810 708 aaKnown RBP13.34□□□□□ -0.27
SHANK2-211ENST00000449833 ARFGAP2Q8N6H7 521 aa13.34□□□□□ -0.27
SHANK2-211ENST00000449833 UBAC1Q9BSL1 405 aa13.34□□□□□ -0.27
SHANK2-211ENST00000449833 THEGQ9P2T0 379 aa13.34□□□□□ -0.27
SHANK2-211ENST00000449833 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
SHANK2-211ENST00000449833 SPATS2Q86XZ4 545 aaKnown RBP13.34□□□□□ -0.27
SHANK2-211ENST00000449833 CHD1LQ86WJ1 897 aa13.34□□□□□ -0.27
SHANK2-211ENST00000449833 RAB3IL1Q8TBN0 382 aa13.34□□□□□ -0.27
SHANK2-211ENST00000449833 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
SHANK2-211ENST00000449833 TRIM7Q9C029 511 aa13.34□□□□□ -0.27
SHANK2-211ENST00000449833 PHAXQ9H814 394 aaKnown RBP13.34□□□□□ -0.27
SHANK2-211ENST00000449833 WIZO95785 1651 aa13.34□□□□□ -0.27
SHANK2-211ENST00000449833 A0A1W2PRG0 241 aa13.33□□□□□ -0.27
SHANK2-211ENST00000449833 MACROD2A1Z1Q3 448 aa13.33□□□□□ -0.27
SHANK2-211ENST00000449833 DNAJC8O75937 253 aaPredicted RBP13.33□□□□□ -0.27
SHANK2-211ENST00000449833 PPP1R14CQ8TAE6 165 aa13.33□□□□□ -0.27
SHANK2-211ENST00000449833 MTUS1Q9ULD2 1270 aa13.33□□□□□ -0.27
SHANK2-211ENST00000449833 NOB1Q9ULX3 412 aaKnown RBP13.33□□□□□ -0.27
SHANK2-211ENST00000449833 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.27
SHANK2-211ENST00000449833 CCDC172P0C7W6 258 aa13.33□□□□□ -0.27
SHANK2-211ENST00000449833 ZNF76P36508 570 aa13.33□□□□□ -0.28
SHANK2-211ENST00000449833 FERMT1Q9BQL6 677 aa13.33□□□□□ -0.28
SHANK2-211ENST00000449833 SEPT10Q9P0V9 454 aa13.33□□□□□ -0.28
SHANK2-211ENST00000449833 SLC8A1P32418 973 aa13.33□□□□□ -0.28
SHANK2-211ENST00000449833 JAKMIP1Q96N16 626 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms