RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 RRP12Q5JTH9 1297 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 CEP85LQ5SZL2 805 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 GPR161Q8N6U8 529 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 HOOK2Q96ED9 719 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 ABLIM1O14639 778 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 SEPT2Q15019 361 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 THUMPD2Q9BTF0 503 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 VCXQ9H320 206 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 LARSQ9P2J5 1176 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 ODF2LQ9ULJ1 636 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 GPRASP1Q5JY77 1395 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 C21orf2O43822 256 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 RPS6KA5O75582 802 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 CPP00450 1065 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 LMAN1P49257 510 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 APBA1Q02410 837 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 ADCY2Q08462 1091 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 PPFIA1Q13136 1202 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 KRBA2Q6ZNG9 492 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 SMARCA4P51532 1647 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 KIAA0753Q2KHM9 967 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 LRRC23Q53EV4 343 aaPredicted RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 RABGGTAQ92696 567 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 TRIM5Q9C035 493 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 PPP1R1BQ9UD71 204 aaPredicted RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 EFCAB8A8MWE9 144 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 GCFC2P16383 781 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 LRRFIP1Q32MZ4 808 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 FCHSD1Q86WN1 690 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 GON4LQ3T8J9 2241 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 GCKP35557 465 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 CCDC47Q96A33 483 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 DDX19AQ9NUU7 478 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 NKTRP30414 1462 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 EFCAB5A4FU69 1503 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 PPFIA2O75334 1257 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 CCT6AP40227 531 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 HNRNPH2P55795 449 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 TMF1P82094 1093 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 CROCCP2Q86T23 111 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 LMNTD2Q8IXW0 634 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 FAM71BQ8TC56 605 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 PAIP2BQ9ULR5 123 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 SATB2Q9UPW6 733 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 LOC102724159A0A0B4J2E5 919 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 PIP4K2BP78356 416 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 NUCB1Q02818 461 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 PWP2Q15269 919 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 CCDC92Q53HC0 331 aaPredicted RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 CCDC158Q5M9N0 1113 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 MCTP1Q6DN14 999 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 ACTR5Q9H9F9 607 aaPredicted RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 TOP2AP11388 1531 aaKnown RBP3.38□□□□□ -1.87
CHD9-203ENST00000447540 MX1P20591 662 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 MAP3K11Q16584 847 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 NUP133Q8WUM0 1156 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 KIF1BPQ96EK5 621 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 TOMM22Q9NS69 142 aa3.38□□□□□ -1.87
CHD9-203ENST00000447540 ATXN2Q99700 1313 aaKnown RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 BIRC2Q13490 618 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 NBPF15Q8N660 670 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 PDCD7Q8N8D1 485 aaKnown RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 CCDC114Q96M63 670 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 PSDA5PKW4 1024 aaPredicted RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 RIOK3O14730 519 aaKnown RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 RAB15P59190 212 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 CACNA2D4Q7Z3S7 1137 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 ARHGAP18Q8N392 663 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 SIN3AQ96ST3 1273 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 LRRCC1Q9C099 1032 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 DESP17661 470 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 TAF7Q15545 349 aaPredicted RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 TSPAN18Q96SJ8 248 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 IQSEC3Q9UPP2 1182 aaPredicted RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 OPA1O60313 960 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 KDM4AO75164 1064 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 EIF2S1P05198 315 aaKnown RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 PIP4K2AP48426 406 aaPredicted RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 KLHL23Q8NBE8 558 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 TBC1D31Q96DN5 1066 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 DRC1Q96MC2 740 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 CEP126Q9P2H0 1117 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 ZNF148Q9UQR1 794 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.37□□□□□ -1.873e-6■■□□□ 12.1
CHD9-203ENST00000447540 NEBLO76041 1014 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 ADCY5O95622 1261 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 MAPK8IP2Q13387 824 aaPredicted RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 SLC4A8Q2Y0W8 1093 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 EHBP1Q8NDI1 1231 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 SOGA1O94964 1423 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 E2F6O75461 281 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 U2AF2P26368 475 aaKnown RBP eCLIP3.37□□□□□ -1.873e-6■■■□□ 17
CHD9-203ENST00000447540 PDE6BP35913 854 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 KRT85P78386 507 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 GNL2Q13823 731 aaKnown RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 MIS12Q9H081 205 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 GOPCQ9HD26 462 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 CWC25Q9NXE8 425 aaPredicted RBP3.37□□□□□ -1.87
CHD9-203ENST00000447540 ETAA1Q9NY74 926 aa3.37□□□□□ -1.87
CHD9-203ENST00000447540 DKK3Q9UBP4 350 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms