RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 GNL2Q13823 731 aaKnown RBP7.72□□□□□ -1.17
TM9SF3-202ENST00000443638 COX20Q5RI15 118 aa7.72□□□□□ -1.17
TM9SF3-202ENST00000443638 SDE2Q6IQ49 451 aa7.72□□□□□ -1.17
TM9SF3-202ENST00000443638 GJD3Q8N144 294 aa7.72□□□□□ -1.17
TM9SF3-202ENST00000443638 STAG2Q8N3U4 1231 aa7.72□□□□□ -1.17
TM9SF3-202ENST00000443638 ZNF511Q8NB15 262 aa7.72□□□□□ -1.17
TM9SF3-202ENST00000443638 TSPAN10Q9H1Z9 355 aaPredicted RBP7.72□□□□□ -1.17
TM9SF3-202ENST00000443638 DDX41Q9UJV9 622 aaKnown RBP7.72□□□□□ -1.17
TM9SF3-202ENST00000443638 CTSHP09668 335 aa7.71□□□□□ -1.18
TM9SF3-202ENST00000443638 ALG1LQ6GMV1 187 aa7.71□□□□□ -1.18
TM9SF3-202ENST00000443638 NLGN1Q8N2Q7 840 aa7.71□□□□□ -1.18
TM9SF3-202ENST00000443638 SLC4A9Q96Q91 983 aa7.71□□□□□ -1.18
TM9SF3-202ENST00000443638 SBNO2Q9Y2G9 1366 aa7.71□□□□□ -1.18
TM9SF3-202ENST00000443638 BACH1O14867 736 aa7.7□□□□□ -1.18
TM9SF3-202ENST00000443638 ERVK-9P63128 1117 aa7.7□□□□□ -1.18
TM9SF3-202ENST00000443638 FAM26DQ5JW98 314 aa7.7□□□□□ -1.18
TM9SF3-202ENST00000443638 POTEAQ6S8J7 498 aa7.7□□□□□ -1.18
TM9SF3-202ENST00000443638 ANKK1Q8NFD2 765 aa7.7□□□□□ -1.18
TM9SF3-202ENST00000443638 CRELD1Q96HD1 420 aa7.7□□□□□ -1.18
TM9SF3-202ENST00000443638 C2orf49Q9BVC5 232 aaPredicted RBP7.7□□□□□ -1.18
TM9SF3-202ENST00000443638 QTRT2Q9H974 415 aaKnown RBP7.7□□□□□ -1.18
TM9SF3-202ENST00000443638 PNMA6FA0A0J9YX94 578 aa7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 ZBTB39O15060 712 aa7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 DNAJA1P31689 397 aaKnown RBP7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 BCAMP50895 628 aa7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 GDF10P55107 478 aa7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 RACK1P63244 317 aaKnown RBP7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 ARID5AQ03989 594 aa7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 PTPN12Q05209 780 aaKnown RBP7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 PPP1R18Q6NYC8 613 aa7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 CCDC24Q8N4L8 307 aa7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 FBF1Q8TES7 1133 aa7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 VTI1AQ96AJ9 217 aa7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 MYO19Q96H55 970 aa7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 IRX2Q9BZI1 471 aaPredicted RBP7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 NIF3L1Q9GZT8 377 aa7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 OSBPL3Q9H4L5 887 aa7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 SRA1Q9HD15 236 aaKnown RBP7.69□□□□□ -1.18
TM9SF3-202ENST00000443638 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.69□□□□□ -1.182e-8■■■■■ 104.6
TM9SF3-202ENST00000443638 STAU1O95793 577 aaKnown RBP7.68□□□□□ -1.18
TM9SF3-202ENST00000443638 ADH1BP00325 375 aa7.68□□□□□ -1.18
TM9SF3-202ENST00000443638 INHAP05111 366 aa7.68□□□□□ -1.18
TM9SF3-202ENST00000443638 AGERQ15109 404 aa7.68□□□□□ -1.18
TM9SF3-202ENST00000443638 LINC01559Q495D7 138 aa7.68□□□□□ -1.18
TM9SF3-202ENST00000443638 ZNF746Q6NUN9 644 aaPredicted RBP7.68□□□□□ -1.18
TM9SF3-202ENST00000443638 LRFN2Q9ULH4 789 aa7.68□□□□□ -1.18
TM9SF3-202ENST00000443638 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.68□□□□□ -1.18
TM9SF3-202ENST00000443638 AK5Q9Y6K8 562 aa7.68□□□□□ -1.18
TM9SF3-202ENST00000443638 ERVH48-1M5A8F1 160 aa7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 FGRP09769 529 aa7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 ZNF394Q53GI3 561 aa7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 INTS6LQ5JSJ4 861 aaKnown RBP7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 SOGA3Q5TF21 947 aa7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 MCF2L2Q86YR7 1114 aa7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 ZNF654Q8IZM8 581 aa7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 ABTB2Q8N961 1025 aa7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 GPATCH3Q96I76 525 aa7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 FRMD6Q96NE9 622 aa7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 KCTD15Q96SI1 283 aaPredicted RBP7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 CYLDQ9NQC7 956 aa7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 SCHIP1Q9P0W5 487 aaPredicted RBP7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 INPP5FQ9Y2H2 1132 aa7.67□□□□□ -1.18
TM9SF3-202ENST00000443638 TLL1O43897 1013 aa7.66□□□□□ -1.18
TM9SF3-202ENST00000443638 PPP1R12BO60237 982 aaPredicted RBP7.66□□□□□ -1.18
TM9SF3-202ENST00000443638 ITGBL1O95965 494 aaPredicted RBP7.66□□□□□ -1.18
TM9SF3-202ENST00000443638 ATCAYQ86WG3 371 aa7.66□□□□□ -1.18
TM9SF3-202ENST00000443638 SPACA7Q96KW9 195 aa7.66□□□□□ -1.18
TM9SF3-202ENST00000443638 OSBPL2Q9H1P3 480 aa7.66□□□□□ -1.18
TM9SF3-202ENST00000443638 ZSWIM4Q9H7M6 989 aa7.66□□□□□ -1.18
TM9SF3-202ENST00000443638 ETNK1Q9HBU6 452 aa7.66□□□□□ -1.18
TM9SF3-202ENST00000443638 POLIQ9UNA4 740 aa7.66□□□□□ -1.18
TM9SF3-202ENST00000443638 MZF1P28698 734 aaPredicted RBP7.65□□□□□ -1.18
TM9SF3-202ENST00000443638 MYT1Q01538 1121 aa7.65□□□□□ -1.18
TM9SF3-202ENST00000443638 AAMPQ13685 434 aa7.65□□□□□ -1.18
TM9SF3-202ENST00000443638 MTFR1Q15390 333 aa7.65□□□□□ -1.18
TM9SF3-202ENST00000443638 CC2D2BQ6DHV5 1058 aa7.65□□□□□ -1.18
TM9SF3-202ENST00000443638 NYAP1Q6ZVC0 841 aa7.65□□□□□ -1.18
TM9SF3-202ENST00000443638 JAZF1Q86VZ6 243 aa7.65□□□□□ -1.18
TM9SF3-202ENST00000443638 SLC9A9Q8IVB4 645 aa7.65□□□□□ -1.18
TM9SF3-202ENST00000443638 CHMP7Q8WUX9 453 aaPredicted RBP7.65□□□□□ -1.18
TM9SF3-202ENST00000443638 MAP4K5Q9Y4K4 846 aa7.65□□□□□ -1.18
TM9SF3-202ENST00000443638 PCDHGB7Q9Y5F8 929 aa7.65□□□□□ -1.18
TM9SF3-202ENST00000443638 USP5P45974 858 aa7.64□□□□□ -1.19
TM9SF3-202ENST00000443638 GJA8P48165 433 aa7.64□□□□□ -1.19
TM9SF3-202ENST00000443638 COPS2P61201 443 aa7.64□□□□□ -1.19
TM9SF3-202ENST00000443638 SH3BP2P78314 561 aa7.64□□□□□ -1.19
TM9SF3-202ENST00000443638 TCEAL1Q15170 157 aa7.64□□□□□ -1.19
TM9SF3-202ENST00000443638 PMFBP1Q8TBY8 1022 aa7.64□□□□□ -1.19
TM9SF3-202ENST00000443638 CSRNP1Q96S65 589 aa7.64□□□□□ -1.19
TM9SF3-202ENST00000443638 SERTAD1Q9UHV2 236 aa7.64□□□□□ -1.19
TM9SF3-202ENST00000443638 ZBTB24O43167 697 aaPredicted RBP7.63□□□□□ -1.19
TM9SF3-202ENST00000443638 ZPR1O75312 459 aa7.63□□□□□ -1.19
TM9SF3-202ENST00000443638 PDGFAP04085 211 aa7.63□□□□□ -1.19
TM9SF3-202ENST00000443638 RAB15P59190 212 aa7.63□□□□□ -1.19
TM9SF3-202ENST00000443638 USP48Q86UV5 1035 aa7.63□□□□□ -1.19
TM9SF3-202ENST00000443638 PSMA6P60900 246 aaKnown RBP7.62□□□□□ -1.19
TM9SF3-202ENST00000443638 TBCELQ5QJ74 424 aa7.62□□□□□ -1.19
TM9SF3-202ENST00000443638 ETFBKMTQ8IXQ9 262 aa7.62□□□□□ -1.19
TM9SF3-202ENST00000443638 WBP1LQ9NX94 342 aa7.62□□□□□ -1.19
TM9SF3-202ENST00000443638 A6NJY4 79 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms