RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 ADAMTS7Q9UKP4 1686 aa19.29■□□□□ 0.68
LINC00642-202ENST00000442515 TJP1Q07157 1748 aa19.28■□□□□ 0.68
LINC00642-202ENST00000442515 SOS1Q07889 1333 aaPredicted RBP19.28■□□□□ 0.68
LINC00642-202ENST00000442515 TNNT2P45379 298 aaPredicted RBP19.28■□□□□ 0.68
LINC00642-202ENST00000442515 TIAM2Q8IVF5 1701 aa19.28■□□□□ 0.68
LINC00642-202ENST00000442515 FOXN1O15353 648 aa19.27■□□□□ 0.68
LINC00642-202ENST00000442515 C1orf141Q5JVX7 400 aa19.26■□□□□ 0.67
LINC00642-202ENST00000442515 DPY19L2Q6NUT2 758 aa19.26■□□□□ 0.67
LINC00642-202ENST00000442515 C2CD5Q86YS7 1000 aa19.26■□□□□ 0.67
LINC00642-202ENST00000442515 DNAJC10Q8IXB1 793 aa19.26■□□□□ 0.67
LINC00642-202ENST00000442515 CARMIL3Q8ND23 1372 aa19.26■□□□□ 0.67
LINC00642-202ENST00000442515 AEBP1Q8IUX7 1158 aa19.25■□□□□ 0.67
LINC00642-202ENST00000442515 PRDM10Q9NQV6 1147 aa19.25■□□□□ 0.67
LINC00642-202ENST00000442515 NARFQ9UHQ1 456 aa19.25■□□□□ 0.67
LINC00642-202ENST00000442515 COL15A1P39059 1388 aa19.24■□□□□ 0.67
LINC00642-202ENST00000442515 CNTNAP1P78357 1384 aa19.24■□□□□ 0.67
LINC00642-202ENST00000442515 SERPINB2P05120 415 aa19.24■□□□□ 0.67
LINC00642-202ENST00000442515 CHADLQ6NUI6 762 aa19.24■□□□□ 0.67
LINC00642-202ENST00000442515 POTEIP0CG38 1075 aa19.23■□□□□ 0.67
LINC00642-202ENST00000442515 POTEJP0CG39 1038 aa19.23■□□□□ 0.67
LINC00642-202ENST00000442515 BCL2L12Q9HB09 334 aa19.23■□□□□ 0.67
LINC00642-202ENST00000442515 NRXN2Q9P2S2 1712 aa19.22■□□□□ 0.67
LINC00642-202ENST00000442515 H0YIN7 160 aa19.22■□□□□ 0.67
LINC00642-202ENST00000442515 ERFEQ4G0M1 354 aa19.22■□□□□ 0.67
LINC00642-202ENST00000442515 ZBTB1Q9Y2K1 713 aa19.22■□□□□ 0.67
LINC00642-202ENST00000442515 DLEC1Q9Y238 1755 aa19.21■□□□□ 0.67
LINC00642-202ENST00000442515 CYP19A1P11511 503 aaPredicted RBP19.21■□□□□ 0.67
LINC00642-202ENST00000442515 CTCFP49711 727 aaPredicted RBP19.2■□□□□ 0.66
LINC00642-202ENST00000442515 AIDAQ96BJ3 306 aa19.2■□□□□ 0.66
LINC00642-202ENST00000442515 AFDNP55196 1824 aaKnown RBP19.19■□□□□ 0.66
LINC00642-202ENST00000442515 C21orf2O43822 256 aa19.18■□□□□ 0.66
LINC00642-202ENST00000442515 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
LINC00642-202ENST00000442515 PASKQ96RG2 1323 aa19.18■□□□□ 0.66
LINC00642-202ENST00000442515 DDNO94850 711 aaPredicted RBP19.17■□□□□ 0.66
LINC00642-202ENST00000442515 ZNF622Q969S3 477 aaKnown RBP eCLIP19.17■□□□□ 0.66
LINC00642-202ENST00000442515 SLC52A2Q9HAB3 445 aa19.17■□□□□ 0.66
LINC00642-202ENST00000442515 VEGFBP49765 207 aa19.16■□□□□ 0.66
LINC00642-202ENST00000442515 SLC39A6Q13433 755 aa19.16■□□□□ 0.66
LINC00642-202ENST00000442515 SULT6B1Q6IMI4 303 aa19.16■□□□□ 0.66
LINC00642-202ENST00000442515 BICDL1Q6ZP65 573 aa19.16■□□□□ 0.66
LINC00642-202ENST00000442515 TAOK3Q9H2K8 898 aa19.16■□□□□ 0.66
LINC00642-202ENST00000442515 FAM161AQ3B820 660 aa19.15■□□□□ 0.66
LINC00642-202ENST00000442515 LDHDQ86WU2 507 aa19.15■□□□□ 0.66
LINC00642-202ENST00000442515 LTBP3Q9NS15 1303 aa19.15■□□□□ 0.66
LINC00642-202ENST00000442515 MRC1P22897 1456 aa19.15■□□□□ 0.66
LINC00642-202ENST00000442515 LBX1P52954 281 aa19.14■□□□□ 0.65
LINC00642-202ENST00000442515 AKAP4Q5JQC9 854 aa19.14■□□□□ 0.65
LINC00642-202ENST00000442515 IQCA1LA6NCM1 817 aa19.13■□□□□ 0.65
LINC00642-202ENST00000442515 BRIP1Q9BX63 1249 aa19.13■□□□□ 0.65
LINC00642-202ENST00000442515 LGR6Q9HBX8 967 aa19.13■□□□□ 0.65
LINC00642-202ENST00000442515 WBP1LQ9NX94 342 aa19.13■□□□□ 0.65
LINC00642-202ENST00000442515 PDZRN3Q9UPQ7 1066 aa19.13■□□□□ 0.65
LINC00642-202ENST00000442515 TMEM88BA6NKF7 163 aa19.12■□□□□ 0.65
LINC00642-202ENST00000442515 CANXP27824 592 aaKnown RBP19.12■□□□□ 0.65
LINC00642-202ENST00000442515 PDE6BP35913 854 aa19.12■□□□□ 0.65
LINC00642-202ENST00000442515 TBC1D9BQ66K14 1250 aa19.12■□□□□ 0.65
LINC00642-202ENST00000442515 CCDC24Q8N4L8 307 aa19.12■□□□□ 0.65
LINC00642-202ENST00000442515 ABHD8Q96I13 439 aa19.12■□□□□ 0.65
LINC00642-202ENST00000442515 POLR3GLQ9BT43 218 aa19.12■□□□□ 0.65
LINC00642-202ENST00000442515 TAF1DQ9H5J8 278 aaPredicted RBP19.12■□□□□ 0.65
LINC00642-202ENST00000442515 PRR5LQ6MZQ0 368 aa19.11■□□□□ 0.65
LINC00642-202ENST00000442515 VSIG10Q8N0Z9 540 aa19.11■□□□□ 0.65
LINC00642-202ENST00000442515 L3MBTL3Q96JM7 780 aaPredicted RBP19.11■□□□□ 0.65
LINC00642-202ENST00000442515 CCDC88AQ3V6T2 1871 aa19.1■□□□□ 0.65
LINC00642-202ENST00000442515 HSPA8P11142 646 aaKnown RBP19.1■□□□□ 0.65
LINC00642-202ENST00000442515 EIF5P55010 431 aaKnown RBP19.1■□□□□ 0.65
LINC00642-202ENST00000442515 SCN11AQ9UI33 1791 aa19.1■□□□□ 0.65
LINC00642-202ENST00000442515 COL11A2P13942 1736 aaPredicted RBP19.1■□□□□ 0.65
LINC00642-202ENST00000442515 RNMTO43148 476 aaKnown RBP19.09■□□□□ 0.65
LINC00642-202ENST00000442515 ITGBL1O95965 494 aaPredicted RBP19.09■□□□□ 0.65
LINC00642-202ENST00000442515 FER1L6Q2WGJ9 1857 aa19.09■□□□□ 0.65
LINC00642-202ENST00000442515 IL13P35225 146 aa19.08■□□□□ 0.64
LINC00642-202ENST00000442515 PRPF40BQ6NWY9 871 aaKnown RBP19.08■□□□□ 0.64
LINC00642-202ENST00000442515 ANKRD31Q8N7Z5 1873 aa19.07■□□□□ 0.64
LINC00642-202ENST00000442515 A0A087WZG4 1122 aa19.07■□□□□ 0.64
LINC00642-202ENST00000442515 EAPPQ56P03 285 aaPredicted RBP19.07■□□□□ 0.64
LINC00642-202ENST00000442515 CNKSR1Q969H4 720 aa19.07■□□□□ 0.64
LINC00642-202ENST00000442515 DICER1Q9UPY3 1922 aaKnown RBP19.06■□□□□ 0.64
LINC00642-202ENST00000442515 RASSF10A6NK89 507 aa19.06■□□□□ 0.64
LINC00642-202ENST00000442515 SOGA3Q5TF21 947 aa19.06■□□□□ 0.64
LINC00642-202ENST00000442515 ZNF541Q9H0D2 1346 aa19.05■□□□□ 0.64
LINC00642-202ENST00000442515 STARD3NLO95772 234 aa19.05■□□□□ 0.64
LINC00642-202ENST00000442515 STYK1Q6J9G0 422 aa19.05■□□□□ 0.64
LINC00642-202ENST00000442515 CNBD1Q8NA66 436 aa19.05■□□□□ 0.64
LINC00642-202ENST00000442515 SCN7AQ01118 1682 aa19.05■□□□□ 0.64
LINC00642-202ENST00000442515 SRGNP10124 158 aa19.04■□□□□ 0.64
LINC00642-202ENST00000442515 MORC1Q86VD1 984 aa19.04■□□□□ 0.64
LINC00642-202ENST00000442515 PANK3Q9H999 370 aa19.04■□□□□ 0.64
LINC00642-202ENST00000442515 TBC1D2BQ9UPU7 963 aa19.04■□□□□ 0.64
LINC00642-202ENST00000442515 ZNF330Q9Y3S2 320 aaPredicted RBP19.04■□□□□ 0.64
LINC00642-202ENST00000442515 NPHP1O15259 732 aa19.03■□□□□ 0.64
LINC00642-202ENST00000442515 MAP2K1Q02750 393 aaPredicted RBP19.03■□□□□ 0.64
LINC00642-202ENST00000442515 DEFB115Q30KQ5 88 aa19.03■□□□□ 0.64
LINC00642-202ENST00000442515 MASTLQ96GX5 879 aa19.03■□□□□ 0.64
LINC00642-202ENST00000442515 HACL1Q9UJ83 578 aa19.03■□□□□ 0.64
LINC00642-202ENST00000442515 CLEC11AQ9Y240 323 aa19.03■□□□□ 0.64
LINC00642-202ENST00000442515 WDR33Q9C0J8 1336 aaKnown RBP19.02■□□□□ 0.64
LINC00642-202ENST00000442515 ST5P78524 1137 aa19.02■□□□□ 0.64
LINC00642-202ENST00000442515 TTC5Q8N0Z6 440 aa19.02■□□□□ 0.64
LINC00642-202ENST00000442515 EPHX2P34913 555 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms