RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 KCPQ6ZWJ8 1503 aa23.55■■□□□ 1.36
POLR1E-203ENST00000442009 DNAAF4Q8WXU2 420 aa23.55■■□□□ 1.36
POLR1E-203ENST00000442009 USP44Q9H0E7 712 aa23.55■■□□□ 1.36
POLR1E-203ENST00000442009 BEND3Q5T5X7 828 aa23.54■■□□□ 1.36
POLR1E-203ENST00000442009 LRP10Q7Z4F1 713 aa23.54■■□□□ 1.36
POLR1E-203ENST00000442009 DCTPP1Q9H773 170 aa23.54■■□□□ 1.36
POLR1E-203ENST00000442009 THRAP3Q9Y2W1 955 aaKnown RBP23.54■■□□□ 1.36
POLR1E-203ENST00000442009 USP16Q9Y5T5 823 aa23.54■■□□□ 1.36
POLR1E-203ENST00000442009 GNAI3P08754 354 aa23.54■■□□□ 1.36
POLR1E-203ENST00000442009 C8orf34Q49A92 452 aa23.54■■□□□ 1.36
POLR1E-203ENST00000442009 NUTM2BA6NNL0 878 aaPredicted RBP23.53■■□□□ 1.36
POLR1E-203ENST00000442009 NUTM2EB1AL46 878 aaPredicted RBP23.53■■□□□ 1.36
POLR1E-203ENST00000442009 FAM161AQ3B820 660 aa23.53■■□□□ 1.36
POLR1E-203ENST00000442009 NUTM2AQ8IVF1 878 aaPredicted RBP23.53■■□□□ 1.36
POLR1E-203ENST00000442009 CDCA7Q9BWT1 371 aaPredicted RBP23.53■■□□□ 1.36
POLR1E-203ENST00000442009 JCADQ9P266 1359 aa23.53■■□□□ 1.36
POLR1E-203ENST00000442009 LRP6O75581 1613 aa23.53■■□□□ 1.36
POLR1E-203ENST00000442009 ITGB4P16144 1822 aa23.53■■□□□ 1.36
POLR1E-203ENST00000442009 KSR2Q6VAB6 950 aa23.52■■□□□ 1.36
POLR1E-203ENST00000442009 CERKQ8TCT0 537 aa23.52■■□□□ 1.36
POLR1E-203ENST00000442009 GNAI2P04899 355 aa23.52■■□□□ 1.36
POLR1E-203ENST00000442009 SRCIN1Q9C0H9 1055 aa23.52■■□□□ 1.36
POLR1E-203ENST00000442009 SPATA31A5Q5VU36 1347 aa23.51■■□□□ 1.35
POLR1E-203ENST00000442009 SPATA31A7Q8IWB4 1347 aa23.51■■□□□ 1.35
POLR1E-203ENST00000442009 CHD1LQ86WJ1 897 aa23.51■■□□□ 1.35
POLR1E-203ENST00000442009 EXOC5O00471 708 aa23.5■■□□□ 1.35
POLR1E-203ENST00000442009 AEBP2Q6ZN18 517 aaPredicted RBP23.49■■□□□ 1.35
POLR1E-203ENST00000442009 MAP3K2Q9Y2U5 619 aa23.48■■□□□ 1.35
POLR1E-203ENST00000442009 IBTKQ9P2D0 1353 aaPredicted RBP23.48■■□□□ 1.35
POLR1E-203ENST00000442009 ERBB4Q15303 1308 aa23.48■■□□□ 1.35
POLR1E-203ENST00000442009 PIGBQ92521 554 aa23.47■■□□□ 1.35
POLR1E-203ENST00000442009 TMOD3Q9NYL9 352 aa23.47■■□□□ 1.35
POLR1E-203ENST00000442009 ALDH1L1O75891 902 aa23.47■■□□□ 1.35
POLR1E-203ENST00000442009 BARGINQ6ZT62 677 aa23.47■■□□□ 1.35
POLR1E-203ENST00000442009 DDX58O95786 925 aaKnown RBP23.46■■□□□ 1.35
POLR1E-203ENST00000442009 ANKRD45Q5TZF3 282 aa23.46■■□□□ 1.35
POLR1E-203ENST00000442009 ATP8B2P98198 1209 aa23.45■■□□□ 1.34
POLR1E-203ENST00000442009 LNPKQ9C0E8 428 aa23.45■■□□□ 1.34
POLR1E-203ENST00000442009 BCL9O00512 1426 aa23.45■■□□□ 1.34
POLR1E-203ENST00000442009 BCL9LQ86UU0 1499 aa23.44■■□□□ 1.34
POLR1E-203ENST00000442009 HMMRO75330 724 aa23.44■■□□□ 1.34
POLR1E-203ENST00000442009 UBTFL1P0CB47 393 aaPredicted RBP23.44■■□□□ 1.34
POLR1E-203ENST00000442009 COPS6Q7L5N1 327 aa23.44■■□□□ 1.34
POLR1E-203ENST00000442009 UNC5CLQ8IV45 518 aa23.44■■□□□ 1.34
POLR1E-203ENST00000442009 XAGE3Q8WTP9 111 aa23.44■■□□□ 1.34
POLR1E-203ENST00000442009 NBPF26B4DH59 902 aa23.43■■□□□ 1.34
POLR1E-203ENST00000442009 MYL6BP14649 208 aa23.43■■□□□ 1.34
POLR1E-203ENST00000442009 NBPF14Q5TI25 921 aa23.43■■□□□ 1.34
POLR1E-203ENST00000442009 NBPF10Q6P3W6 841 aaKnown RBP23.43■■□□□ 1.34
POLR1E-203ENST00000442009 NBPF15Q8N660 670 aa23.43■■□□□ 1.34
POLR1E-203ENST00000442009 LINS1Q8NG48 757 aa23.43■■□□□ 1.34
POLR1E-203ENST00000442009 LRRFIP2Q9Y608 721 aaKnown RBP23.43■■□□□ 1.34
POLR1E-203ENST00000442009 SPATA31A6Q5VVP1 1343 aa23.43■■□□□ 1.34
POLR1E-203ENST00000442009 NBPF7P0C2Y1 421 aaPredicted RBP23.43■■□□□ 1.34
POLR1E-203ENST00000442009 FNBP4Q8N3X1 1017 aaPredicted RBP23.43■■□□□ 1.34
POLR1E-203ENST00000442009 ATG3Q9NT62 314 aa23.43■■□□□ 1.34
POLR1E-203ENST00000442009 AIMP1Q12904 312 aaKnown RBP23.42■■□□□ 1.34
POLR1E-203ENST00000442009 ASAP1Q9ULH1 1129 aa23.42■■□□□ 1.34
POLR1E-203ENST00000442009 PTCD1O75127 700 aaKnown RBP23.41■■□□□ 1.34
POLR1E-203ENST00000442009 VSIG10Q8N0Z9 540 aa23.41■■□□□ 1.34
POLR1E-203ENST00000442009 UTYO14607 1347 aa23.41■■□□□ 1.34
POLR1E-203ENST00000442009 PNMA6EA0A0J9YXQ4 647 aa23.4■■□□□ 1.34
POLR1E-203ENST00000442009 DDB1Q16531 1140 aa23.4■■□□□ 1.34
POLR1E-203ENST00000442009 ANKRD13DQ6ZTN6 518 aa23.4■■□□□ 1.34
POLR1E-203ENST00000442009 KAT6BQ8WYB5 2073 aa23.4■■□□□ 1.34
POLR1E-203ENST00000442009 IGKV5-2P06315 115 aa23.39■■□□□ 1.33
POLR1E-203ENST00000442009 VPS72Q15906 364 aa23.39■■□□□ 1.33
POLR1E-203ENST00000442009 SSH3Q8TE77 659 aa23.39■■□□□ 1.33
POLR1E-203ENST00000442009 METTL22Q9BUU2 404 aaPredicted RBP23.39■■□□□ 1.33
POLR1E-203ENST00000442009 DOT1LQ8TEK3 1739 aa23.39■■□□□ 1.33
POLR1E-203ENST00000442009 PIP4K2AP48426 406 aaPredicted RBP23.38■■□□□ 1.33
POLR1E-203ENST00000442009 CWF19L2Q2TBE0 894 aaKnown RBP23.38■■□□□ 1.33
POLR1E-203ENST00000442009 RIC3Q7Z5B4 369 aa23.38■■□□□ 1.33
POLR1E-203ENST00000442009 NGLY1Q96IV0 654 aa23.38■■□□□ 1.33
POLR1E-203ENST00000442009 MARCH10Q8NA82 808 aaPredicted RBP23.38■■□□□ 1.33
POLR1E-203ENST00000442009 ARFGEF2Q9Y6D5 1785 aa23.38■■□□□ 1.33
POLR1E-203ENST00000442009 POLA2Q14181 598 aa23.37■■□□□ 1.33
POLR1E-203ENST00000442009 C8orf37Q96NL8 207 aa23.37■■□□□ 1.33
POLR1E-203ENST00000442009 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.37■■□□□ 1.33
POLR1E-203ENST00000442009 A1BGP04217 495 aa23.36■■□□□ 1.33
POLR1E-203ENST00000442009 MTX1Q13505 466 aa23.36■■□□□ 1.33
POLR1E-203ENST00000442009 TEX13AQ9BXU3 409 aaPredicted RBP23.36■■□□□ 1.33
POLR1E-203ENST00000442009 PLBD2Q8NHP8 589 aa23.36■■□□□ 1.33
POLR1E-203ENST00000442009 PRIM1P49642 420 aaKnown RBP23.35■■□□□ 1.33
POLR1E-203ENST00000442009 NEURL1BA8MQ27 555 aa23.34■■□□□ 1.33
POLR1E-203ENST00000442009 GRM8O00222 908 aa23.34■■□□□ 1.33
POLR1E-203ENST00000442009 PPP1R42Q7Z4L9 355 aa23.34■■□□□ 1.33
POLR1E-203ENST00000442009 NUP188Q5SRE5 1749 aa23.34■■□□□ 1.33
POLR1E-203ENST00000442009 BMP2KLQ5H9B9 411 aa23.33■■□□□ 1.33
POLR1E-203ENST00000442009 PLEKHM2Q8IWE5 1019 aa23.33■■□□□ 1.33
POLR1E-203ENST00000442009 SLC4A9Q96Q91 983 aa23.33■■□□□ 1.33
POLR1E-203ENST00000442009 C9orf78Q9NZ63 289 aaPredicted RBP23.33■■□□□ 1.33
POLR1E-203ENST00000442009 CCDC9Q9Y3X0 531 aaKnown RBP23.33■■□□□ 1.33
POLR1E-203ENST00000442009 NEXNQ0ZGT2 675 aa23.33■■□□□ 1.32
POLR1E-203ENST00000442009 HDAC5Q9UQL6 1122 aa23.33■■□□□ 1.32
POLR1E-203ENST00000442009 HSPA1LP34931 641 aa23.32■■□□□ 1.32
POLR1E-203ENST00000442009 GCKRQ14397 625 aa23.32■■□□□ 1.32
POLR1E-203ENST00000442009 DNAJC10Q8IXB1 793 aa23.32■■□□□ 1.32
POLR1E-203ENST00000442009 KAZALD1Q96I82 304 aa23.32■■□□□ 1.32
POLR1E-203ENST00000442009 SEC24BO95487 1268 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms