RNA–Protein interactions for RNA: ENST00000440652.5

UBE2D4-203, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 1,299 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-203ENST00000440652 SSH2Q76I76 1423 aa9.77□□□□□ -0.85
UBE2D4-203ENST00000440652 ACTN4O43707 911 aaKnown RBP9.77□□□□□ -0.85
UBE2D4-203ENST00000440652 ZC3H6P61129 1189 aaKnown RBP9.77□□□□□ -0.85
UBE2D4-203ENST00000440652 C14orf93Q9H972 538 aaKnown RBP9.77□□□□□ -0.85
UBE2D4-203ENST00000440652 TRAK1Q9UPV9 953 aa9.77□□□□□ -0.85
UBE2D4-203ENST00000440652 PCDHB3Q9Y5E6 796 aa9.77□□□□□ -0.85
UBE2D4-203ENST00000440652 ATP7BP35670 1465 aa9.77□□□□□ -0.85
UBE2D4-203ENST00000440652 NINLQ9Y2I6 1382 aa9.76□□□□□ -0.85
UBE2D4-203ENST00000440652 ITSN1Q15811 1721 aa9.76□□□□□ -0.85
UBE2D4-203ENST00000440652 LRRC37A3O60309 1634 aa9.76□□□□□ -0.85
UBE2D4-203ENST00000440652 ZPR1O75312 459 aa9.76□□□□□ -0.85
UBE2D4-203ENST00000440652 CFHP08603 1231 aa9.76□□□□□ -0.85
UBE2D4-203ENST00000440652 NGDNQ8NEJ9 315 aaKnown RBP9.76□□□□□ -0.85
UBE2D4-203ENST00000440652 MPHOSPH9Q99550 1183 aa9.76□□□□□ -0.85
UBE2D4-203ENST00000440652 PDGFDQ9GZP0 370 aaPredicted RBP9.76□□□□□ -0.85
UBE2D4-203ENST00000440652 SPON1Q9HCB6 807 aa9.76□□□□□ -0.85
UBE2D4-203ENST00000440652 LMO7Q8WWI1 1683 aa9.75□□□□□ -0.85
UBE2D4-203ENST00000440652 KCNQ2O43526 872 aa9.75□□□□□ -0.85
UBE2D4-203ENST00000440652 PDE3BQ13370 1112 aa9.75□□□□□ -0.85
UBE2D4-203ENST00000440652 NBPF8Q3BBV2 869 aa9.75□□□□□ -0.85
UBE2D4-203ENST00000440652 KMT5BQ4FZB7 885 aa9.75□□□□□ -0.85
UBE2D4-203ENST00000440652 NBPF14Q5TI25 921 aa9.75□□□□□ -0.85
UBE2D4-203ENST00000440652 PPP1R18Q6NYC8 613 aa9.75□□□□□ -0.85
UBE2D4-203ENST00000440652 LARP1Q6PKG0 1096 aaKnown RBP9.75□□□□□ -0.85
UBE2D4-203ENST00000440652 BLOC1S3Q6QNY0 202 aa9.75□□□□□ -0.85
UBE2D4-203ENST00000440652 DAXXQ9UER7 740 aaPredicted RBP9.75□□□□□ -0.85
UBE2D4-203ENST00000440652 TOPAZ1Q8N9V7 1692 aa9.74□□□□□ -0.85
UBE2D4-203ENST00000440652 UTRNP46939 3433 aa9.74□□□□□ -0.85
UBE2D4-203ENST00000440652 ARHGEF28Q8N1W1 1705 aaKnown RBP9.74□□□□□ -0.85
UBE2D4-203ENST00000440652 PEAK1Q9H792 1746 aa9.74□□□□□ -0.85
UBE2D4-203ENST00000440652 PARP4Q9UKK3 1724 aaKnown RBP9.74□□□□□ -0.85
UBE2D4-203ENST00000440652 SENP3-EIF4A1A0A087X0R7 540 aa9.74□□□□□ -0.85
UBE2D4-203ENST00000440652 SIRT1Q96EB6 747 aa9.74□□□□□ -0.85
UBE2D4-203ENST00000440652 ZBTB7AO95365 584 aa9.73□□□□□ -0.85
UBE2D4-203ENST00000440652 DIEXFQ68CQ4 756 aaKnown RBP9.73□□□□□ -0.85
UBE2D4-203ENST00000440652 PTF1AQ7RTS3 328 aa9.73□□□□□ -0.85
UBE2D4-203ENST00000440652 ZNF784Q8NCA9 323 aaPredicted RBP9.73□□□□□ -0.85
UBE2D4-203ENST00000440652 NLRP7Q8WX94 980 aa9.73□□□□□ -0.85
UBE2D4-203ENST00000440652 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.73□□□□□ -0.85
UBE2D4-203ENST00000440652 EIF3AQ14152 1382 aaKnown RBP9.73□□□□□ -0.85
UBE2D4-203ENST00000440652 RGPD3A6NKT7 1758 aaPredicted RBP9.73□□□□□ -0.85
UBE2D4-203ENST00000440652 RGPD4Q7Z3J3 1758 aa9.73□□□□□ -0.85
UBE2D4-203ENST00000440652 ZBTB7CA1YPR0 619 aa9.72□□□□□ -0.85
UBE2D4-203ENST00000440652 WASLO00401 505 aaPredicted RBP9.72□□□□□ -0.85
UBE2D4-203ENST00000440652 EVA1CP58658 441 aa9.72□□□□□ -0.85
UBE2D4-203ENST00000440652 TONSLQ96HA7 1378 aa9.72□□□□□ -0.85
UBE2D4-203ENST00000440652 OVOS2A0A0G2JMS6 1433 aa9.72□□□□□ -0.85
UBE2D4-203ENST00000440652 OVOS2A0A0J9YW53 1432 aa9.72□□□□□ -0.85
UBE2D4-203ENST00000440652 OVOS2Q6IE36 1432 aa9.72□□□□□ -0.85
UBE2D4-203ENST00000440652 COL5A2P05997 1499 aaPredicted RBP9.72□□□□□ -0.85
UBE2D4-203ENST00000440652 WNK3Q9BYP7 1800 aa9.71□□□□□ -0.85
UBE2D4-203ENST00000440652 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
UBE2D4-203ENST00000440652 MAP2K5Q13163 448 aa9.71□□□□□ -0.86
UBE2D4-203ENST00000440652 BARGINQ6ZT62 677 aa9.71□□□□□ -0.86
UBE2D4-203ENST00000440652 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.71□□□□□ -0.86
UBE2D4-203ENST00000440652 TCP11L2Q8N4U5 519 aa9.71□□□□□ -0.86
UBE2D4-203ENST00000440652 IRX2Q9BZI1 471 aaPredicted RBP9.71□□□□□ -0.86
UBE2D4-203ENST00000440652 SBF2Q86WG5 1849 aa9.7□□□□□ -0.86
UBE2D4-203ENST00000440652 TMUB1Q9BVT8 246 aa9.69□□□□□ -0.86
UBE2D4-203ENST00000440652 IRF6O14896 467 aa9.68□□□□□ -0.86
UBE2D4-203ENST00000440652 TLL1O43897 1013 aa9.68□□□□□ -0.86
UBE2D4-203ENST00000440652 NUDT16Q96DE0 195 aaKnown RBP9.68□□□□□ -0.86
UBE2D4-203ENST00000440652 FHDC1Q9C0D6 1143 aaPredicted RBP9.68□□□□□ -0.86
UBE2D4-203ENST00000440652 AKAP12Q02952 1782 aa9.68□□□□□ -0.86
UBE2D4-203ENST00000440652 CRB1P82279 1406 aa9.67□□□□□ -0.86
UBE2D4-203ENST00000440652 CPDO75976 1380 aa9.67□□□□□ -0.86
UBE2D4-203ENST00000440652 ACEP12821 1306 aa9.67□□□□□ -0.86
UBE2D4-203ENST00000440652 PRKD2Q9BZL6 878 aa9.67□□□□□ -0.86
UBE2D4-203ENST00000440652 POLR3AO14802 1390 aaPredicted RBP9.66□□□□□ -0.86
UBE2D4-203ENST00000440652 USP19O94966 1318 aa9.66□□□□□ -0.86
UBE2D4-203ENST00000440652 DDX11L8A8MPP1 907 aa9.66□□□□□ -0.86
UBE2D4-203ENST00000440652 NR1I2O75469 434 aa9.66□□□□□ -0.86
UBE2D4-203ENST00000440652 ABTB2Q8N961 1025 aa9.66□□□□□ -0.86
UBE2D4-203ENST00000440652 V9GY48 417 aaPredicted RBP9.66□□□□□ -0.86
UBE2D4-203ENST00000440652 GGCXP38435 758 aa9.65□□□□□ -0.86
UBE2D4-203ENST00000440652 C1QTNF8P60827 252 aa9.65□□□□□ -0.86
UBE2D4-203ENST00000440652 GCGRP47871 477 aa9.64□□□□□ -0.87
UBE2D4-203ENST00000440652 DDB1Q16531 1140 aa9.64□□□□□ -0.87
UBE2D4-203ENST00000440652 PUS10Q3MIT2 529 aaKnown RBP9.64□□□□□ -0.87
UBE2D4-203ENST00000440652 SULF1Q8IWU6 871 aa9.64□□□□□ -0.87
UBE2D4-203ENST00000440652 SCUBE3Q8IX30 993 aa9.64□□□□□ -0.87
UBE2D4-203ENST00000440652 RDH13Q8NBN7 331 aa9.64□□□□□ -0.87
UBE2D4-203ENST00000440652 DCAF11Q8TEB1 546 aa9.64□□□□□ -0.87
UBE2D4-203ENST00000440652 SYT17Q9BSW7 474 aa9.64□□□□□ -0.87
UBE2D4-203ENST00000440652 CDK19Q9BWU1 502 aa9.64□□□□□ -0.87
UBE2D4-203ENST00000440652 RNF223E7ERA6 249 aa9.63□□□□□ -0.87
UBE2D4-203ENST00000440652 ADH1BP00325 375 aa9.63□□□□□ -0.87
UBE2D4-203ENST00000440652 MORN1Q5T089 497 aa9.63□□□□□ -0.87
UBE2D4-203ENST00000440652 TOM1L2Q6ZVM7 507 aa9.63□□□□□ -0.87
UBE2D4-203ENST00000440652 THRAP3Q9Y2W1 955 aaKnown RBP9.63□□□□□ -0.87
UBE2D4-203ENST00000440652 PIK3C2AO00443 1686 aa9.63□□□□□ -0.87
UBE2D4-203ENST00000440652 PPIP5K1Q6PFW1 1433 aa9.63□□□□□ -0.87
UBE2D4-203ENST00000440652 PAPPAQ13219 1627 aa9.63□□□□□ -0.87
UBE2D4-203ENST00000440652 CHD4Q14839 1912 aa9.62□□□□□ -0.87
UBE2D4-203ENST00000440652 SLIT3O75094 1523 aa9.62□□□□□ -0.87
UBE2D4-203ENST00000440652 PLSCR1O15162 318 aa9.62□□□□□ -0.87
UBE2D4-203ENST00000440652 GCP02774 474 aa9.62□□□□□ -0.87
UBE2D4-203ENST00000440652 FUT2Q10981 343 aa9.62□□□□□ -0.87
UBE2D4-203ENST00000440652 MARCH10Q8NA82 808 aaPredicted RBP9.62□□□□□ -0.87
UBE2D4-203ENST00000440652 CCDC102AQ96A19 550 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms