RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 BRMS1Q9HCU9 246 aa17.08■□□□□ 0.32
PCNX1-202ENST00000439984 MTMR7Q9Y216 660 aa17.08■□□□□ 0.32
PCNX1-202ENST00000439984 PLEKHH1Q9ULM0 1364 aa17.08■□□□□ 0.32
PCNX1-202ENST00000439984 KLHL10Q6JEL2 608 aa17.08■□□□□ 0.32
PCNX1-202ENST00000439984 CCDC91Q7Z6B0 441 aa17.08■□□□□ 0.32
PCNX1-202ENST00000439984 SMC5Q8IY18 1101 aa17.08■□□□□ 0.32
PCNX1-202ENST00000439984 CCDC113Q9H0I3 377 aa17.08■□□□□ 0.32
PCNX1-202ENST00000439984 A0A1B0GUL7 405 aa17.08■□□□□ 0.32
PCNX1-202ENST00000439984 PIP4K2AP48426 406 aaPredicted RBP17.08■□□□□ 0.32
PCNX1-202ENST00000439984 STX1AQ16623 288 aa17.08■□□□□ 0.32
PCNX1-202ENST00000439984 DDX58O95786 925 aaKnown RBP17.07■□□□□ 0.32
PCNX1-202ENST00000439984 TERF1P54274 439 aa17.07■□□□□ 0.32
PCNX1-202ENST00000439984 MAP2K1Q02750 393 aaPredicted RBP17.07■□□□□ 0.32
PCNX1-202ENST00000439984 ZGPATQ8N5A5 531 aaKnown RBP17.07■□□□□ 0.32
PCNX1-202ENST00000439984 RAD21O60216 631 aa17.07■□□□□ 0.32
PCNX1-202ENST00000439984 SRCIN1Q9C0H9 1055 aa17.07■□□□□ 0.32
PCNX1-202ENST00000439984 GABPB1Q06547 395 aaPredicted RBP17.07■□□□□ 0.32
PCNX1-202ENST00000439984 FAM69CQ0P6D2 419 aa17.07■□□□□ 0.32
PCNX1-202ENST00000439984 BCL2L12Q9HB09 334 aa17.07■□□□□ 0.32
PCNX1-202ENST00000439984 LIMCH1Q9UPQ0 1083 aa17.07■□□□□ 0.32
PCNX1-202ENST00000439984 TCOF1Q13428 1488 aaKnown RBP17.06■□□□□ 0.32
PCNX1-202ENST00000439984 POTEB2H3BUK9 544 aa17.06■□□□□ 0.32
PCNX1-202ENST00000439984 RIC3Q7Z5B4 369 aa17.06■□□□□ 0.32
PCNX1-202ENST00000439984 XBP1P17861 261 aa17.06■□□□□ 0.32
PCNX1-202ENST00000439984 CCDC30Q5VVM6 783 aa17.06■□□□□ 0.32
PCNX1-202ENST00000439984 FSIP1Q8NA03 581 aa17.06■□□□□ 0.32
PCNX1-202ENST00000439984 THUMPD2Q9BTF0 503 aaKnown RBP17.06■□□□□ 0.32
PCNX1-202ENST00000439984 EID1Q9Y6B2 187 aa17.06■□□□□ 0.32
PCNX1-202ENST00000439984 TSHZ3Q63HK5 1081 aa17.05■□□□□ 0.32
PCNX1-202ENST00000439984 RPAP2Q8IXW5 612 aaPredicted RBP17.05■□□□□ 0.32
PCNX1-202ENST00000439984 FAM200AQ8TCP9 573 aa17.05■□□□□ 0.32
PCNX1-202ENST00000439984 DNAJC25Q9H1X3 360 aa17.05■□□□□ 0.32
PCNX1-202ENST00000439984 ANKRD62A6NC57 917 aa17.05■□□□□ 0.32
PCNX1-202ENST00000439984 FYB1O15117 783 aa17.05■□□□□ 0.32
PCNX1-202ENST00000439984 MCM3P25205 808 aa17.05■□□□□ 0.32
PCNX1-202ENST00000439984 SYT10Q6XYQ8 523 aa17.05■□□□□ 0.32
PCNX1-202ENST00000439984 TANGO6Q9C0B7 1094 aa17.05■□□□□ 0.32
PCNX1-202ENST00000439984 CCT4P50991 539 aaKnown RBP17.05■□□□□ 0.32
PCNX1-202ENST00000439984 RAPGEF3O95398 923 aa17.04■□□□□ 0.32
PCNX1-202ENST00000439984 EIF5P55010 431 aaKnown RBP17.04■□□□□ 0.32
PCNX1-202ENST00000439984 ATP10BO94823 1461 aa17.04■□□□□ 0.32
PCNX1-202ENST00000439984 WDR62O43379 1518 aa17.03■□□□□ 0.32
PCNX1-202ENST00000439984 TMPOP42166 694 aaKnown RBP17.03■□□□□ 0.32
PCNX1-202ENST00000439984 GBP6Q6ZN66 633 aa17.03■□□□□ 0.32
PCNX1-202ENST00000439984 CCDC150Q8NCX0 1101 aa17.03■□□□□ 0.32
PCNX1-202ENST00000439984 ZSCAN22P10073 491 aaPredicted RBP17.03■□□□□ 0.32
PCNX1-202ENST00000439984 PIBF1Q8WXW3 757 aa17.03■□□□□ 0.32
PCNX1-202ENST00000439984 AACSQ86V21 672 aa17.03■□□□□ 0.32
PCNX1-202ENST00000439984 TNNQ9UQP3 1299 aa17.03■□□□□ 0.32
PCNX1-202ENST00000439984 ELF2Q15723 593 aa17.03■□□□□ 0.32
PCNX1-202ENST00000439984 CCAR1Q8IX12 1150 aaKnown RBP17.03■□□□□ 0.32
PCNX1-202ENST00000439984 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
PCNX1-202ENST00000439984 CTAGE5O15320 804 aa17.03■□□□□ 0.32
PCNX1-202ENST00000439984 SEPT7Q16181 437 aaKnown RBP17.03■□□□□ 0.32
PCNX1-202ENST00000439984 ADAMTS12P58397 1594 aa17.02■□□□□ 0.32
PCNX1-202ENST00000439984 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.32
PCNX1-202ENST00000439984 SRGAP3O43295 1099 aa17.02■□□□□ 0.32
PCNX1-202ENST00000439984 PPFIA3O75145 1194 aa17.02■□□□□ 0.32
PCNX1-202ENST00000439984 MATR3P43243 847 aaKnown RBP eCLIP17.02■□□□□ 0.324e-8■■■□□ 16
PCNX1-202ENST00000439984 SLC26A8Q96RN1 970 aa17.02■□□□□ 0.31
PCNX1-202ENST00000439984 RAB11FIP3O75154 756 aa17.02■□□□□ 0.31
PCNX1-202ENST00000439984 TXLNAP40222 546 aa17.02■□□□□ 0.31
PCNX1-202ENST00000439984 HSP90AA4PQ58FG1 418 aa17.01■□□□□ 0.31
PCNX1-202ENST00000439984 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
PCNX1-202ENST00000439984 NUCB1Q02818 461 aa17.01■□□□□ 0.31
PCNX1-202ENST00000439984 PRAM1Q96QH2 718 aa17.01■□□□□ 0.31
PCNX1-202ENST00000439984 LUZP1Q86V48 1076 aa17.01■□□□□ 0.31
PCNX1-202ENST00000439984 SH2B1Q9NRF2 756 aaPredicted RBP17.01■□□□□ 0.31
PCNX1-202ENST00000439984 CCDC69A6NI79 296 aa17.01■□□□□ 0.31
PCNX1-202ENST00000439984 SCLT1Q96NL6 688 aa17.01■□□□□ 0.31
PCNX1-202ENST00000439984 KIAA0556O60303 1618 aa17■□□□□ 0.31
PCNX1-202ENST00000439984 DNM1Q05193 864 aaKnown RBP17■□□□□ 0.31
PCNX1-202ENST00000439984 NUP88Q99567 741 aaPredicted RBP17■□□□□ 0.31
PCNX1-202ENST00000439984 DACT1Q9NYF0 836 aa17■□□□□ 0.31
PCNX1-202ENST00000439984 TTC22Q5TAA0 569 aa17■□□□□ 0.31
PCNX1-202ENST00000439984 DISP3Q9P2K9 1392 aa17■□□□□ 0.31
PCNX1-202ENST00000439984 MAATS1Q7Z4T9 603 aa17■□□□□ 0.31
PCNX1-202ENST00000439984 IFFO1Q0D2I5 559 aa16.99■□□□□ 0.31
PCNX1-202ENST00000439984 DNAJC21Q5F1R6 531 aaKnown RBP16.99■□□□□ 0.31
PCNX1-202ENST00000439984 LUC7LQ9NQ29 371 aaKnown RBP16.99■□□□□ 0.31
PCNX1-202ENST00000439984 ERC1Q8IUD2 1116 aa16.99■□□□□ 0.31
PCNX1-202ENST00000439984 EBAG9O00559 213 aa16.99■□□□□ 0.31
PCNX1-202ENST00000439984 TYRO3Q06418 890 aa16.99■□□□□ 0.31
PCNX1-202ENST00000439984 STIM1Q13586 685 aa16.99■□□□□ 0.31
PCNX1-202ENST00000439984 NBPF11Q86T75 865 aa16.99■□□□□ 0.31
PCNX1-202ENST00000439984 TAF4BQ92750 862 aa16.99■□□□□ 0.31
PCNX1-202ENST00000439984 SLC3A2P08195 630 aaKnown RBP16.99■□□□□ 0.31
PCNX1-202ENST00000439984 HSPA4P34932 840 aa16.98■□□□□ 0.31
PCNX1-202ENST00000439984 AOPEPQ8N6M6 819 aa16.98■□□□□ 0.31
PCNX1-202ENST00000439984 PUF60Q9UHX1 559 aaKnown RBP16.98■□□□□ 0.31
PCNX1-202ENST00000439984 TTC5Q8N0Z6 440 aa16.98■□□□□ 0.31
PCNX1-202ENST00000439984 NAA25Q14CX7 972 aa16.98■□□□□ 0.31
PCNX1-202ENST00000439984 NECAB1Q8N987 351 aa16.98■□□□□ 0.31
PCNX1-202ENST00000439984 CCDC175P0C221 793 aa16.98■□□□□ 0.31
PCNX1-202ENST00000439984 ATRIPQ8WXE1 791 aa16.98■□□□□ 0.31
PCNX1-202ENST00000439984 GOPCQ9HD26 462 aa16.98■□□□□ 0.31
PCNX1-202ENST00000439984 GAS2L3Q86XJ1 694 aa16.98■□□□□ 0.31
PCNX1-202ENST00000439984 OTUD6BQ8N6M0 293 aa16.98■□□□□ 0.31
PCNX1-202ENST00000439984 SPA17Q15506 151 aa16.97■□□□□ 0.31
PCNX1-202ENST00000439984 GOLGA6L9A6NEM1 432 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms