RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 NLRP8Q86W28 1048 aa9.3□□□□□ -0.92
UPP2-IT1-201ENST00000439185 MKL2Q9ULH7 1088 aa9.3□□□□□ -0.92
UPP2-IT1-201ENST00000439185 USP3Q9Y6I4 520 aa9.3□□□□□ -0.92
UPP2-IT1-201ENST00000439185 A0A1W2PNR3 127 aa9.29□□□□□ -0.92
UPP2-IT1-201ENST00000439185 ATXN7O15265 892 aaPredicted RBP9.29□□□□□ -0.92
UPP2-IT1-201ENST00000439185 ITGB2P05107 769 aa9.29□□□□□ -0.92
UPP2-IT1-201ENST00000439185 MTFR1Q15390 333 aa9.29□□□□□ -0.92
UPP2-IT1-201ENST00000439185 NBPF1Q3BBV0 1214 aa9.29□□□□□ -0.92
UPP2-IT1-201ENST00000439185 ZNF295-AS1Q8N0V1 137 aa9.29□□□□□ -0.92
UPP2-IT1-201ENST00000439185 ALG2Q9H553 416 aa9.29□□□□□ -0.92
UPP2-IT1-201ENST00000439185 CABP1Q9NZU7 370 aa9.29□□□□□ -0.92
UPP2-IT1-201ENST00000439185 IQSEC3Q9UPP2 1182 aaPredicted RBP9.29□□□□□ -0.92
UPP2-IT1-201ENST00000439185 AMPD1P23109 780 aa9.28□□□□□ -0.92
UPP2-IT1-201ENST00000439185 NOD1Q9Y239 953 aa9.28□□□□□ -0.92
UPP2-IT1-201ENST00000439185 TATP17735 454 aaPredicted RBP9.27□□□□□ -0.93
UPP2-IT1-201ENST00000439185 GTF2IP78347 998 aa9.27□□□□□ -0.93
UPP2-IT1-201ENST00000439185 SLCO4C1Q6ZQN7 724 aa9.27□□□□□ -0.93
UPP2-IT1-201ENST00000439185 WWC1Q8IX03 1113 aa9.27□□□□□ -0.93
UPP2-IT1-201ENST00000439185 POM121Q96HA1 1249 aa9.27□□□□□ -0.93
UPP2-IT1-201ENST00000439185 SPOCK3Q9BQ16 436 aa9.27□□□□□ -0.93
UPP2-IT1-201ENST00000439185 PARP3Q9Y6F1 533 aa9.27□□□□□ -0.93
UPP2-IT1-201ENST00000439185 DCDC2BA2VCK2 349 aa9.26□□□□□ -0.93
UPP2-IT1-201ENST00000439185 LZTS3O60299 673 aaPredicted RBP9.26□□□□□ -0.93
UPP2-IT1-201ENST00000439185 ARAFP10398 606 aa9.26□□□□□ -0.93
UPP2-IT1-201ENST00000439185 MAPTP10636 758 aaKnown RBP9.26□□□□□ -0.93
UPP2-IT1-201ENST00000439185 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.26□□□□□ -0.93
UPP2-IT1-201ENST00000439185 BTBD6Q96KE9 485 aa9.26□□□□□ -0.93
UPP2-IT1-201ENST00000439185 ZIC5Q96T25 663 aa9.26□□□□□ -0.93
UPP2-IT1-201ENST00000439185 ZDHHC3Q9NYG2 299 aa9.26□□□□□ -0.93
UPP2-IT1-201ENST00000439185 NEURL1BA8MQ27 555 aa9.25□□□□□ -0.93
UPP2-IT1-201ENST00000439185 BACH1O14867 736 aa9.25□□□□□ -0.93
UPP2-IT1-201ENST00000439185 KHNYNO15037 678 aaKnown RBP9.25□□□□□ -0.93
UPP2-IT1-201ENST00000439185 EPXP11678 715 aa9.25□□□□□ -0.93
UPP2-IT1-201ENST00000439185 TNP2Q05952 138 aa9.25□□□□□ -0.93
UPP2-IT1-201ENST00000439185 PSME1Q06323 249 aa9.25□□□□□ -0.93
UPP2-IT1-201ENST00000439185 NCOA4Q13772 614 aa9.25□□□□□ -0.93
UPP2-IT1-201ENST00000439185 DEPDC4Q8N2C3 294 aa9.25□□□□□ -0.93
UPP2-IT1-201ENST00000439185 NFATC2IPQ8NCF5 419 aa9.25□□□□□ -0.93
UPP2-IT1-201ENST00000439185 HCN2Q9UL51 889 aa9.25□□□□□ -0.93
UPP2-IT1-201ENST00000439185 KRBA1A5PL33 1030 aa9.24□□□□□ -0.93
UPP2-IT1-201ENST00000439185 HOXB4P17483 251 aaPredicted RBP9.24□□□□□ -0.93
UPP2-IT1-201ENST00000439185 CD33P20138 364 aa9.24□□□□□ -0.93
UPP2-IT1-201ENST00000439185 COL8A1P27658 744 aa9.24□□□□□ -0.93
UPP2-IT1-201ENST00000439185 LINC00114Q6XXX2 140 aa9.24□□□□□ -0.93
UPP2-IT1-201ENST00000439185 ZNF358Q9NW07 568 aa9.24□□□□□ -0.93
UPP2-IT1-201ENST00000439185 GJA3Q9Y6H8 435 aa9.24□□□□□ -0.93
UPP2-IT1-201ENST00000439185 RAD21O60216 631 aa9.23□□□□□ -0.93
UPP2-IT1-201ENST00000439185 SCHIP1Q9P0W5 487 aaPredicted RBP9.23□□□□□ -0.93
UPP2-IT1-201ENST00000439185 PROCP04070 461 aa9.22□□□□□ -0.93
UPP2-IT1-201ENST00000439185 TXLNAP40222 546 aa9.22□□□□□ -0.93
UPP2-IT1-201ENST00000439185 FAM182BQ5T319 152 aa9.22□□□□□ -0.93
UPP2-IT1-201ENST00000439185 BICDL1Q6ZP65 573 aa9.22□□□□□ -0.93
UPP2-IT1-201ENST00000439185 SUV39H2Q9H5I1 410 aa9.22□□□□□ -0.93
UPP2-IT1-201ENST00000439185 KLF15Q9UIH9 416 aa9.22□□□□□ -0.93
UPP2-IT1-201ENST00000439185 USP17L5A8MUK1 530 aa9.21□□□□□ -0.94
UPP2-IT1-201ENST00000439185 ADH6P28332 368 aa9.21□□□□□ -0.94
UPP2-IT1-201ENST00000439185 GRIN2CQ14957 1233 aa9.21□□□□□ -0.94
UPP2-IT1-201ENST00000439185 ZDHHC1Q8WTX9 485 aa9.21□□□□□ -0.94
UPP2-IT1-201ENST00000439185 POM121CA8CG34 1229 aa9.2□□□□□ -0.94
UPP2-IT1-201ENST00000439185 FAM157BP0CG42 384 aa9.2□□□□□ -0.94
UPP2-IT1-201ENST00000439185 ALYREFQ86V81 257 aaKnown RBP9.2□□□□□ -0.94
UPP2-IT1-201ENST00000439185 TNS4Q8IZW8 715 aa9.2□□□□□ -0.94
UPP2-IT1-201ENST00000439185 L3MBTL2Q969R5 705 aa9.2□□□□□ -0.94
UPP2-IT1-201ENST00000439185 GNB5O14775 395 aa9.19□□□□□ -0.94
UPP2-IT1-201ENST00000439185 NOS2P35228 1153 aa9.19□□□□□ -0.94
UPP2-IT1-201ENST00000439185 TEAD4Q15561 434 aa9.19□□□□□ -0.94
UPP2-IT1-201ENST00000439185 TBCELQ5QJ74 424 aa9.19□□□□□ -0.94
UPP2-IT1-201ENST00000439185 STRN4Q9NRL3 753 aa9.19□□□□□ -0.94
UPP2-IT1-201ENST00000439185 PRR12Q9ULL5 1215 aa9.19□□□□□ -0.94
UPP2-IT1-201ENST00000439185 PIK3R2O00459 728 aa9.18□□□□□ -0.94
UPP2-IT1-201ENST00000439185 UBTFP17480 764 aaKnown RBP9.18□□□□□ -0.94
UPP2-IT1-201ENST00000439185 EPHA4P54764 986 aa9.18□□□□□ -0.94
UPP2-IT1-201ENST00000439185 PCBP4P57723 403 aaKnown RBP9.18□□□□□ -0.94
UPP2-IT1-201ENST00000439185 SAMD5Q5TGI4 173 aa9.18□□□□□ -0.94
UPP2-IT1-201ENST00000439185 CHSY3Q70JA7 882 aa9.18□□□□□ -0.94
UPP2-IT1-201ENST00000439185 FCHSD1Q86WN1 690 aa9.18□□□□□ -0.94
UPP2-IT1-201ENST00000439185 SLC9A9Q8IVB4 645 aa9.18□□□□□ -0.94
UPP2-IT1-201ENST00000439185 ADAMTS19Q8TE59 1207 aa9.18□□□□□ -0.94
UPP2-IT1-201ENST00000439185 AVENQ9NQS1 362 aaPredicted RBP9.18□□□□□ -0.94
UPP2-IT1-201ENST00000439185 MARK1Q9P0L2 795 aa9.18□□□□□ -0.94
UPP2-IT1-201ENST00000439185 ZNF232Q9UNY5 417 aa9.18□□□□□ -0.94
UPP2-IT1-201ENST00000439185 ZBTB7BO15156 539 aaPredicted RBP9.17□□□□□ -0.94
UPP2-IT1-201ENST00000439185 ADAM23O75077 832 aa9.17□□□□□ -0.94
UPP2-IT1-201ENST00000439185 DGKGP49619 791 aa9.17□□□□□ -0.94
UPP2-IT1-201ENST00000439185 FLIIQ13045 1269 aa9.17□□□□□ -0.94
UPP2-IT1-201ENST00000439185 HDGFL1Q5TGJ6 251 aa9.17□□□□□ -0.94
UPP2-IT1-201ENST00000439185 LRRC69Q6ZNQ3 347 aa9.17□□□□□ -0.94
UPP2-IT1-201ENST00000439185 TRIM50Q86XT4 487 aa9.17□□□□□ -0.94
UPP2-IT1-201ENST00000439185 EFSO43281 561 aa9.16□□□□□ -0.94
UPP2-IT1-201ENST00000439185 ZNF468Q5VIY5 522 aaPredicted RBP9.16□□□□□ -0.94
UPP2-IT1-201ENST00000439185 TPCN2Q8NHX9 752 aa9.16□□□□□ -0.94
UPP2-IT1-201ENST00000439185 NEUROD4Q9HD90 331 aa9.16□□□□□ -0.94
UPP2-IT1-201ENST00000439185 EML1O00423 815 aa9.15□□□□□ -0.94
UPP2-IT1-201ENST00000439185 LAMC2Q13753 1193 aa9.15□□□□□ -0.94
UPP2-IT1-201ENST00000439185 CCDC102BQ68D86 513 aa9.15□□□□□ -0.94
UPP2-IT1-201ENST00000439185 KIAA1024Q9UPX6 916 aa9.15□□□□□ -0.94
UPP2-IT1-201ENST00000439185 SERTM1A2A2V5 107 aa9.14□□□□□ -0.95
UPP2-IT1-201ENST00000439185 USP17L3A6NCW0 530 aa9.14□□□□□ -0.95
UPP2-IT1-201ENST00000439185 USP17L4A6NCW7 530 aa9.14□□□□□ -0.95
UPP2-IT1-201ENST00000439185 BAG6P46379 1132 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms