RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 TIMELESSQ9UNS1 1208 aa14.24□□□□□ -0.13
HOXD3-203ENST00000432796 COL5A3P25940 1745 aaPredicted RBP14.24□□□□□ -0.13
HOXD3-203ENST00000432796 ST20-MTHFSA0A0A6YYL1 179 aa14.23□□□□□ -0.13
HOXD3-203ENST00000432796 IQCA1LA6NCM1 817 aa14.23□□□□□ -0.13
HOXD3-203ENST00000432796 FYB1O15117 783 aa14.23□□□□□ -0.13
HOXD3-203ENST00000432796 ITGBL1O95965 494 aaPredicted RBP14.23□□□□□ -0.13
HOXD3-203ENST00000432796 CRKLP46109 303 aaKnown RBP14.23□□□□□ -0.13
HOXD3-203ENST00000432796 DEFB115Q30KQ5 88 aa14.23□□□□□ -0.13
HOXD3-203ENST00000432796 GGNBP2Q9H3C7 697 aa14.23□□□□□ -0.13
HOXD3-203ENST00000432796 WDR33Q9C0J8 1336 aaKnown RBP14.22□□□□□ -0.13
HOXD3-203ENST00000432796 TNRC18O15417 2968 aaPredicted RBP14.22□□□□□ -0.13
HOXD3-203ENST00000432796 DDNO94850 711 aaPredicted RBP14.22□□□□□ -0.13
HOXD3-203ENST00000432796 CFAP44Q96MT7 982 aa14.22□□□□□ -0.13
HOXD3-203ENST00000432796 VIRMAQ69YN4 1812 aaKnown RBP14.22□□□□□ -0.13
HOXD3-203ENST00000432796 ERVV-2B6SEH9 535 aa14.21□□□□□ -0.13
HOXD3-203ENST00000432796 C2CD5Q86YS7 1000 aa14.2□□□□□ -0.14
HOXD3-203ENST00000432796 BEGAINQ9BUH8 593 aa14.2□□□□□ -0.14
HOXD3-203ENST00000432796 TAF1DQ9H5J8 278 aaPredicted RBP14.2□□□□□ -0.14
HOXD3-203ENST00000432796 LTBP3Q9NS15 1303 aa14.19□□□□□ -0.14
HOXD3-203ENST00000432796 H0YIN7 160 aa14.19□□□□□ -0.14
HOXD3-203ENST00000432796 ZPR1O75312 459 aa14.19□□□□□ -0.14
HOXD3-203ENST00000432796 L3MBTL3Q96JM7 780 aaPredicted RBP14.19□□□□□ -0.14
HOXD3-203ENST00000432796 NFIXQ14938 502 aa14.18□□□□□ -0.14
HOXD3-203ENST00000432796 USPL1Q5W0Q7 1092 aa14.18□□□□□ -0.14
HOXD3-203ENST00000432796 PDE4DIPQ5VU43 2346 aa14.17□□□□□ -0.14
HOXD3-203ENST00000432796 MYH14Q7Z406 1995 aaKnown RBP14.17□□□□□ -0.14
HOXD3-203ENST00000432796 PTCD1O75127 700 aaKnown RBP14.17□□□□□ -0.14
HOXD3-203ENST00000432796 EYA1Q99502 592 aa14.17□□□□□ -0.14
HOXD3-203ENST00000432796 MCOLN1Q9GZU1 580 aa14.17□□□□□ -0.14
HOXD3-203ENST00000432796 TAOK3Q9H2K8 898 aa14.17□□□□□ -0.14
HOXD3-203ENST00000432796 EMILIN1Q9Y6C2 1016 aa14.17□□□□□ -0.14
HOXD3-203ENST00000432796 DLEC1Q9Y238 1755 aa14.17□□□□□ -0.14
HOXD3-203ENST00000432796 C21orf2O43822 256 aa14.16□□□□□ -0.14
HOXD3-203ENST00000432796 SERPINB2P05120 415 aa14.16□□□□□ -0.14
HOXD3-203ENST00000432796 HSP90AB1P08238 724 aaKnown RBP14.16□□□□□ -0.14
HOXD3-203ENST00000432796 EAPPQ56P03 285 aaPredicted RBP14.16□□□□□ -0.14
HOXD3-203ENST00000432796 INTS5Q6P9B9 1019 aaKnown RBP14.16□□□□□ -0.14
HOXD3-203ENST00000432796 CCER1Q8TC90 406 aaPredicted RBP14.16□□□□□ -0.14
HOXD3-203ENST00000432796 TESK2Q96S53 571 aa14.16□□□□□ -0.14
HOXD3-203ENST00000432796 ABT1Q9ULW3 272 aaKnown RBP14.16□□□□□ -0.14
HOXD3-203ENST00000432796 CARMIL3Q8ND23 1372 aa14.16□□□□□ -0.14
HOXD3-203ENST00000432796 THSD7BQ9C0I4 1608 aa14.15□□□□□ -0.14
HOXD3-203ENST00000432796 CABP4P57796 275 aa14.15□□□□□ -0.14
HOXD3-203ENST00000432796 NRXN2Q9P2S2 1712 aa14.15□□□□□ -0.14
HOXD3-203ENST00000432796 ADAMTS7Q9UKP4 1686 aa14.14□□□□□ -0.15
HOXD3-203ENST00000432796 ECE1P42892 770 aa14.14□□□□□ -0.15
HOXD3-203ENST00000432796 PRPF38BQ5VTL8 546 aaKnown RBP14.14□□□□□ -0.15
HOXD3-203ENST00000432796 CNTROBQ8N137 903 aa14.14□□□□□ -0.15
HOXD3-203ENST00000432796 CAPNS2Q96L46 248 aa14.14□□□□□ -0.15
HOXD3-203ENST00000432796 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
HOXD3-203ENST00000432796 CLEC11AQ9Y240 323 aa14.14□□□□□ -0.15
HOXD3-203ENST00000432796 SOS1Q07889 1333 aaPredicted RBP14.14□□□□□ -0.15
HOXD3-203ENST00000432796 PNMA8AQ86V59 439 aaPredicted RBP14.13□□□□□ -0.15
HOXD3-203ENST00000432796 ZNF622Q969S3 477 aaKnown RBP eCLIP14.13□□□□□ -0.15
HOXD3-203ENST00000432796 GPR101Q96P66 508 aaPredicted RBP14.13□□□□□ -0.15
HOXD3-203ENST00000432796 NARFQ9UHQ1 456 aa14.13□□□□□ -0.15
HOXD3-203ENST00000432796 HACL1Q9UJ83 578 aa14.13□□□□□ -0.15
HOXD3-203ENST00000432796 PDZRN3Q9UPQ7 1066 aa14.13□□□□□ -0.15
HOXD3-203ENST00000432796 WASHC2AQ641Q2 1341 aa14.13□□□□□ -0.15
HOXD3-203ENST00000432796 PPM1GO15355 546 aaPredicted RBP14.12□□□□□ -0.15
HOXD3-203ENST00000432796 EPHX2P34913 555 aa14.12□□□□□ -0.15
HOXD3-203ENST00000432796 MAP1SQ66K74 1059 aaPredicted RBP14.12□□□□□ -0.15
HOXD3-203ENST00000432796 TSKSQ9UJT2 592 aa14.12□□□□□ -0.15
HOXD3-203ENST00000432796 CA12O43570 354 aa14.11□□□□□ -0.15
HOXD3-203ENST00000432796 CCDC88AQ3V6T2 1871 aa14.11□□□□□ -0.15
HOXD3-203ENST00000432796 PAXIP1Q6ZW49 1069 aaPredicted RBP14.11□□□□□ -0.15
HOXD3-203ENST00000432796 BCL2L12Q9HB09 334 aa14.11□□□□□ -0.15
HOXD3-203ENST00000432796 DDX21Q9NR30 783 aaKnown RBP eCLIP14.11□□□□□ -0.15
HOXD3-203ENST00000432796 ADAMTSL1Q8N6G6 1762 aa14.11□□□□□ -0.15
HOXD3-203ENST00000432796 SCN4AP35499 1836 aa14.11□□□□□ -0.15
HOXD3-203ENST00000432796 PDE6BP35913 854 aa14.1□□□□□ -0.15
HOXD3-203ENST00000432796 SOGA3Q5TF21 947 aa14.1□□□□□ -0.15
HOXD3-203ENST00000432796 CYP4F22Q6NT55 531 aa14.1□□□□□ -0.15
HOXD3-203ENST00000432796 POLR3GLQ9BT43 218 aa14.1□□□□□ -0.15
HOXD3-203ENST00000432796 COL15A1P39059 1388 aa14.09□□□□□ -0.15
HOXD3-203ENST00000432796 DICER1Q9UPY3 1922 aaKnown RBP14.09□□□□□ -0.15
HOXD3-203ENST00000432796 AFDNP55196 1824 aaKnown RBP14.09□□□□□ -0.15
HOXD3-203ENST00000432796 MAP2K2P36507 400 aa14.09□□□□□ -0.15
HOXD3-203ENST00000432796 GRM1Q13255 1194 aa14.09□□□□□ -0.15
HOXD3-203ENST00000432796 DGKZQ13574 1117 aa14.09□□□□□ -0.15
HOXD3-203ENST00000432796 BRIP1Q9BX63 1249 aa14.09□□□□□ -0.15
HOXD3-203ENST00000432796 FER1L6Q2WGJ9 1857 aa14.09□□□□□ -0.15
HOXD3-203ENST00000432796 TJP1Q07157 1748 aa14.09□□□□□ -0.15
HOXD3-203ENST00000432796 LTBP1Q14766 1721 aa14.09□□□□□ -0.15
HOXD3-203ENST00000432796 KIF20BQ96Q89 1820 aa14.08□□□□□ -0.15
HOXD3-203ENST00000432796 EIF4G2P78344 907 aaKnown RBP eCLIP14.08□□□□□ -0.16
HOXD3-203ENST00000432796 ZNF541Q9H0D2 1346 aa14.08□□□□□ -0.16
HOXD3-203ENST00000432796 DNAJC10Q8IXB1 793 aa14.07□□□□□ -0.16
HOXD3-203ENST00000432796 NFATC2IPQ8NCF5 419 aa14.07□□□□□ -0.16
HOXD3-203ENST00000432796 RNF123Q5XPI4 1314 aa14.07□□□□□ -0.16
HOXD3-203ENST00000432796 CYP19A1P11511 503 aaPredicted RBP14.06□□□□□ -0.16
HOXD3-203ENST00000432796 MTHFSP49914 203 aa14.06□□□□□ -0.16
HOXD3-203ENST00000432796 PLEKHO1Q53GL0 409 aaPredicted RBP14.06□□□□□ -0.16
HOXD3-203ENST00000432796 PRPF40BQ6NWY9 871 aaKnown RBP14.06□□□□□ -0.16
HOXD3-203ENST00000432796 ZNF530Q6P9A1 599 aaPredicted RBP14.06□□□□□ -0.16
HOXD3-203ENST00000432796 CNKSR1Q969H4 720 aa14.06□□□□□ -0.16
HOXD3-203ENST00000432796 ZBTB1Q9Y2K1 713 aa14.06□□□□□ -0.16
HOXD3-203ENST00000432796 ANKRD26Q9UPS8 1709 aa14.06□□□□□ -0.16
HOXD3-203ENST00000432796 EIF4A2Q14240 407 aaKnown RBP14.05□□□□□ -0.16
HOXD3-203ENST00000432796 AMOTQ4VCS5 1084 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms