RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
ABCA8-202ENST00000428549 PNPLA6Q8IY17 1366 aa11.12□□□□□ -0.63
ABCA8-202ENST00000428549 OVOS2A0A0J9YW53 1432 aa11.11□□□□□ -0.63
ABCA8-202ENST00000428549 OVOS2Q6IE36 1432 aa11.11□□□□□ -0.63
ABCA8-202ENST00000428549 GOLGA6CA6NDK9 693 aa11.11□□□□□ -0.63
ABCA8-202ENST00000428549 GOLGA6BA6NDN3 693 aa11.11□□□□□ -0.63
ABCA8-202ENST00000428549 GOLGA6DP0CG33 693 aa11.11□□□□□ -0.63
ABCA8-202ENST00000428549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.11□□□□□ -0.63
ABCA8-202ENST00000428549 HELBQ8NG08 1087 aaPredicted RBP11.11□□□□□ -0.63
ABCA8-202ENST00000428549 DDRGK1Q96HY6 314 aa11.11□□□□□ -0.63
ABCA8-202ENST00000428549 GOLGA6AQ9NYA3 693 aa11.11□□□□□ -0.63
ABCA8-202ENST00000428549 FRMD4BQ9Y2L6 1034 aa11.11□□□□□ -0.63
ABCA8-202ENST00000428549 FAN1Q9Y2M0 1017 aa11.11□□□□□ -0.63
ABCA8-202ENST00000428549 INSRP06213 1382 aa11.11□□□□□ -0.63
ABCA8-202ENST00000428549 AATKQ6ZMQ8 1374 aa11.1□□□□□ -0.63
ABCA8-202ENST00000428549 USP31Q70CQ4 1352 aa11.1□□□□□ -0.63
ABCA8-202ENST00000428549 NUTM2BA6NNL0 878 aaPredicted RBP11.1□□□□□ -0.63
ABCA8-202ENST00000428549 NUTM2EB1AL46 878 aaPredicted RBP11.1□□□□□ -0.63
ABCA8-202ENST00000428549 ZNF500O60304 480 aaPredicted RBP11.1□□□□□ -0.63
ABCA8-202ENST00000428549 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
ABCA8-202ENST00000428549 PSEN1P49768 467 aa11.1□□□□□ -0.63
ABCA8-202ENST00000428549 ZKSCAN2Q63HK3 967 aa11.1□□□□□ -0.63
ABCA8-202ENST00000428549 NUTM2AQ8IVF1 878 aaPredicted RBP11.1□□□□□ -0.63
ABCA8-202ENST00000428549 MSL3Q8N5Y2 521 aaKnown RBP11.1□□□□□ -0.63
ABCA8-202ENST00000428549 PNISRQ8TF01 805 aaKnown RBP11.1□□□□□ -0.63
ABCA8-202ENST00000428549 RBM42Q9BTD8 480 aaKnown RBP11.1□□□□□ -0.63
ABCA8-202ENST00000428549 ARHGEF10LQ9HCE6 1279 aa11.1□□□□□ -0.63
ABCA8-202ENST00000428549 SHPRHQ149N8 1683 aa11.1□□□□□ -0.63
ABCA8-202ENST00000428549 ARHGEF10O15013 1369 aa11.1□□□□□ -0.63
ABCA8-202ENST00000428549 DHX16O60231 1041 aaKnown RBP11.09□□□□□ -0.63
ABCA8-202ENST00000428549 C4orf46Q504U0 113 aa11.09□□□□□ -0.63
ABCA8-202ENST00000428549 NME9Q86XW9 330 aa11.09□□□□□ -0.63
ABCA8-202ENST00000428549 AMOTL1Q8IY63 956 aa11.09□□□□□ -0.63
ABCA8-202ENST00000428549 COG3Q96JB2 828 aa11.09□□□□□ -0.63
ABCA8-202ENST00000428549 GNL3LQ9NVN8 582 aaKnown RBP11.09□□□□□ -0.63
ABCA8-202ENST00000428549 PIK3C2AO00443 1686 aa11.09□□□□□ -0.63
ABCA8-202ENST00000428549 IGBP1P78318 339 aa11.09□□□□□ -0.63
ABCA8-202ENST00000428549 NAALADL2Q58DX5 795 aa11.09□□□□□ -0.63
ABCA8-202ENST00000428549 GET4Q7L5D6 327 aaPredicted RBP11.09□□□□□ -0.63
ABCA8-202ENST00000428549 LARGE2Q8N3Y3 721 aa11.09□□□□□ -0.63
ABCA8-202ENST00000428549 CARD10Q9BWT7 1032 aa11.09□□□□□ -0.63
ABCA8-202ENST00000428549 USTQ9Y2C2 406 aa11.09□□□□□ -0.63
ABCA8-202ENST00000428549 TNS3Q68CZ2 1445 aa11.09□□□□□ -0.63
ABCA8-202ENST00000428549 SMG6Q86US8 1419 aaKnown RBP11.09□□□□□ -0.63
ABCA8-202ENST00000428549 WDHD1O75717 1129 aaPredicted RBP11.08□□□□□ -0.64
ABCA8-202ENST00000428549 BDNFP23560 247 aa11.08□□□□□ -0.64
ABCA8-202ENST00000428549 COPB2P35606 906 aa11.08□□□□□ -0.64
ABCA8-202ENST00000428549 HSP90AB2PQ58FF8 381 aa11.08□□□□□ -0.64
ABCA8-202ENST00000428549 MEX3CQ5U5Q3 659 aaKnown RBP11.08□□□□□ -0.64
ABCA8-202ENST00000428549 RNF25Q96BH1 459 aaPredicted RBP11.08□□□□□ -0.64
ABCA8-202ENST00000428549 TRPM3Q9HCF6 1732 aaPredicted RBP11.08□□□□□ -0.64
ABCA8-202ENST00000428549 GYS2P54840 703 aa11.07□□□□□ -0.64
ABCA8-202ENST00000428549 DDX46Q7L014 1031 aaKnown RBP11.07□□□□□ -0.64
ABCA8-202ENST00000428549 CFAP53Q96M91 514 aa11.07□□□□□ -0.64
ABCA8-202ENST00000428549 MED1Q15648 1581 aaPredicted RBP11.06□□□□□ -0.64
ABCA8-202ENST00000428549 hCG_2014768A0A024R1R8 64 aa11.06□□□□□ -0.64
ABCA8-202ENST00000428549 SEMA3FQ13275 785 aa11.06□□□□□ -0.64
ABCA8-202ENST00000428549 ABTB2Q8N961 1025 aa11.06□□□□□ -0.64
ABCA8-202ENST00000428549 ADAMTS2O95450 1211 aa11.06□□□□□ -0.64
ABCA8-202ENST00000428549 ZNF16P17020 682 aaPredicted RBP11.06□□□□□ -0.64
ABCA8-202ENST00000428549 SCP2P22307 547 aa11.06□□□□□ -0.64
ABCA8-202ENST00000428549 TNNT2P45379 298 aaPredicted RBP11.06□□□□□ -0.64
ABCA8-202ENST00000428549 MTHFSP49914 203 aa11.06□□□□□ -0.64
ABCA8-202ENST00000428549 PPP4CP60510 307 aa11.06□□□□□ -0.64
ABCA8-202ENST00000428549 CALD1Q05682 793 aaKnown RBP11.06□□□□□ -0.64
ABCA8-202ENST00000428549 NOP9Q86U38 636 aaKnown RBP11.06□□□□□ -0.64
ABCA8-202ENST00000428549 SENP7Q9BQF6 1050 aa11.06□□□□□ -0.64
ABCA8-202ENST00000428549 CHPF2Q9P2E5 772 aa11.06□□□□□ -0.64
ABCA8-202ENST00000428549 CDK12Q9NYV4 1490 aaPredicted RBP11.06□□□□□ -0.64
ABCA8-202ENST00000428549 MARF1Q9Y4F3 1742 aaKnown RBP11.05□□□□□ -0.64
ABCA8-202ENST00000428549 COL22A1Q8NFW1 1626 aaPredicted RBP11.05□□□□□ -0.64
ABCA8-202ENST00000428549 COL3A1P02461 1466 aaPredicted RBP11.05□□□□□ -0.64
ABCA8-202ENST00000428549 STK10O94804 968 aaKnown RBP11.05□□□□□ -0.64
ABCA8-202ENST00000428549 C11orf96Q7Z7L8 435 aa11.05□□□□□ -0.64
ABCA8-202ENST00000428549 BLMP54132 1417 aaPredicted RBP11.04□□□□□ -0.64
ABCA8-202ENST00000428549 WDR43Q15061 677 aaKnown RBP eCLIP11.04□□□□□ -0.64
ABCA8-202ENST00000428549 CREBRFQ8IUR6 639 aa11.04□□□□□ -0.64
ABCA8-202ENST00000428549 CABLES1Q8TDN4 633 aa11.04□□□□□ -0.64
ABCA8-202ENST00000428549 ZNF830Q96NB3 372 aaPredicted RBP11.04□□□□□ -0.64
ABCA8-202ENST00000428549 GOPCQ9HD26 462 aa11.04□□□□□ -0.64
ABCA8-202ENST00000428549 ZRANB1Q9UGI0 708 aa11.04□□□□□ -0.64
ABCA8-202ENST00000428549 FBXO9Q9UK97 447 aaPredicted RBP11.04□□□□□ -0.64
ABCA8-202ENST00000428549 PRDM4Q9UKN5 801 aa11.04□□□□□ -0.64
ABCA8-202ENST00000428549 TMA7Q9Y2S6 64 aaKnown RBP11.04□□□□□ -0.64
ABCA8-202ENST00000428549 LRP6O75581 1613 aa11.04□□□□□ -0.64
ABCA8-202ENST00000428549 ALS2Q96Q42 1657 aa11.04□□□□□ -0.64
ABCA8-202ENST00000428549 MAP2P11137 1827 aaKnown RBP11.03□□□□□ -0.64
ABCA8-202ENST00000428549 TCERG1O14776 1098 aaKnown RBP11.03□□□□□ -0.64
ABCA8-202ENST00000428549 PTPROQ16827 1216 aa11.03□□□□□ -0.64
ABCA8-202ENST00000428549 NGLY1Q96IV0 654 aa11.03□□□□□ -0.64
ABCA8-202ENST00000428549 GABBR1Q9UBS5 961 aa11.03□□□□□ -0.64
ABCA8-202ENST00000428549 POLKQ9UBT6 870 aa11.03□□□□□ -0.64
ABCA8-202ENST00000428549 NLRP6P59044 892 aa11.02□□□□□ -0.64
ABCA8-202ENST00000428549 HSP90AA2PQ14568 343 aaPredicted RBP11.02□□□□□ -0.64
ABCA8-202ENST00000428549 HSP90AB3PQ58FF7 597 aa11.02□□□□□ -0.64
ABCA8-202ENST00000428549 NUTM2GQ5VZR2 741 aa11.02□□□□□ -0.64
ABCA8-202ENST00000428549 SMYD5Q6GMV2 418 aa11.02□□□□□ -0.64
ABCA8-202ENST00000428549 CEP126Q9P2H0 1117 aa11.02□□□□□ -0.64
ABCA8-202ENST00000428549 WWC3Q9ULE0 1092 aa11.02□□□□□ -0.64
ABCA8-202ENST00000428549 ERBB3P21860 1342 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms