RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 WASHC2AQ641Q2 1341 aa20.09■□□□□ 0.81
PDE6D-203ENST00000428104 PASKQ96RG2 1323 aa20.09■□□□□ 0.81
PDE6D-203ENST00000428104 CABP4P57796 275 aa20.09■□□□□ 0.81
PDE6D-203ENST00000428104 ERFEQ4G0M1 354 aa20.09■□□□□ 0.81
PDE6D-203ENST00000428104 C2CD5Q86YS7 1000 aa20.09■□□□□ 0.81
PDE6D-203ENST00000428104 ZPR1O75312 459 aa20.08■□□□□ 0.81
PDE6D-203ENST00000428104 NFIXQ14938 502 aa20.08■□□□□ 0.81
PDE6D-203ENST00000428104 INTS5Q6P9B9 1019 aaKnown RBP20.08■□□□□ 0.81
PDE6D-203ENST00000428104 CCDC85CA6NKD9 419 aa20.07■□□□□ 0.8
PDE6D-203ENST00000428104 DDNO94850 711 aaPredicted RBP20.07■□□□□ 0.8
PDE6D-203ENST00000428104 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
PDE6D-203ENST00000428104 KIF20BQ96Q89 1820 aa20.06■□□□□ 0.8
PDE6D-203ENST00000428104 TMEM88BA6NKF7 163 aa20.06■□□□□ 0.8
PDE6D-203ENST00000428104 HSP90AB1P08238 724 aaKnown RBP20.06■□□□□ 0.8
PDE6D-203ENST00000428104 CARMIL3Q8ND23 1372 aa20.06■□□□□ 0.8
PDE6D-203ENST00000428104 H0YIN7 160 aa20.05■□□□□ 0.8
PDE6D-203ENST00000428104 ADAMTS7Q9UKP4 1686 aa20.05■□□□□ 0.8
PDE6D-203ENST00000428104 SERPINB2P05120 415 aa20.04■□□□□ 0.8
PDE6D-203ENST00000428104 RGS19P49795 217 aa20.04■□□□□ 0.8
PDE6D-203ENST00000428104 C21orf2O43822 256 aa20.03■□□□□ 0.8
PDE6D-203ENST00000428104 EIF4A2Q14240 407 aaKnown RBP20.03■□□□□ 0.8
PDE6D-203ENST00000428104 ZNF530Q6P9A1 599 aaPredicted RBP20.03■□□□□ 0.8
PDE6D-203ENST00000428104 LDHDQ86WU2 507 aa20.03■□□□□ 0.8
PDE6D-203ENST00000428104 CARD14Q9BXL6 1004 aa20.03■□□□□ 0.8
PDE6D-203ENST00000428104 CCDC88AQ3V6T2 1871 aa20.03■□□□□ 0.8
PDE6D-203ENST00000428104 SOS1Q07889 1333 aaPredicted RBP20.02■□□□□ 0.8
PDE6D-203ENST00000428104 TJP1Q07157 1748 aa20.02■□□□□ 0.8
PDE6D-203ENST00000428104 ANKRD26Q9UPS8 1709 aa20.02■□□□□ 0.8
PDE6D-203ENST00000428104 SLC24A1O60721 1099 aa20.02■□□□□ 0.8
PDE6D-203ENST00000428104 ITGBL1O95965 494 aaPredicted RBP20.02■□□□□ 0.8
PDE6D-203ENST00000428104 NFATC2IPQ8NCF5 419 aa20.02■□□□□ 0.8
PDE6D-203ENST00000428104 DLEC1Q9Y238 1755 aa20.02■□□□□ 0.8
PDE6D-203ENST00000428104 DNAJC10Q8IXB1 793 aa20.01■□□□□ 0.79
PDE6D-203ENST00000428104 BCL2L12Q9HB09 334 aa20.01■□□□□ 0.79
PDE6D-203ENST00000428104 AFDNP55196 1824 aaKnown RBP20.01■□□□□ 0.79
PDE6D-203ENST00000428104 NRXN2Q9P2S2 1712 aa20■□□□□ 0.79
PDE6D-203ENST00000428104 ZNF622Q969S3 477 aaKnown RBP eCLIP20■□□□□ 0.79
PDE6D-203ENST00000428104 TAF1DQ9H5J8 278 aaPredicted RBP20■□□□□ 0.79
PDE6D-203ENST00000428104 POLKQ9UBT6 870 aa20■□□□□ 0.79
PDE6D-203ENST00000428104 NARFQ9UHQ1 456 aa20■□□□□ 0.79
PDE6D-203ENST00000428104 TNRC18O15417 2968 aaPredicted RBP19.99■□□□□ 0.79
PDE6D-203ENST00000428104 IQCA1LA6NCM1 817 aa19.99■□□□□ 0.79
PDE6D-203ENST00000428104 RASSF10A6NK89 507 aa19.99■□□□□ 0.79
PDE6D-203ENST00000428104 MTHFSP49914 203 aa19.99■□□□□ 0.79
PDE6D-203ENST00000428104 PLEKHO1Q53GL0 409 aaPredicted RBP19.99■□□□□ 0.79
PDE6D-203ENST00000428104 VIRMAQ69YN4 1812 aaKnown RBP19.99■□□□□ 0.79
PDE6D-203ENST00000428104 MAP2K1Q02750 393 aaPredicted RBP19.98■□□□□ 0.79
PDE6D-203ENST00000428104 EAPPQ56P03 285 aaPredicted RBP19.98■□□□□ 0.79
PDE6D-203ENST00000428104 TAOK3Q9H2K8 898 aa19.98■□□□□ 0.79
PDE6D-203ENST00000428104 WDR33Q9C0J8 1336 aaKnown RBP19.98■□□□□ 0.79
PDE6D-203ENST00000428104 COL15A1P39059 1388 aa19.97■□□□□ 0.79
PDE6D-203ENST00000428104 DEFB115Q30KQ5 88 aa19.97■□□□□ 0.79
PDE6D-203ENST00000428104 LTBP3Q9NS15 1303 aa19.97■□□□□ 0.79
PDE6D-203ENST00000428104 BICDL1Q6ZP65 573 aa19.96■□□□□ 0.79
PDE6D-203ENST00000428104 L3MBTL3Q96JM7 780 aaPredicted RBP19.96■□□□□ 0.79
PDE6D-203ENST00000428104 CYP19A1P11511 503 aaPredicted RBP19.95■□□□□ 0.78
PDE6D-203ENST00000428104 CCDC24Q8N4L8 307 aa19.95■□□□□ 0.78
PDE6D-203ENST00000428104 CFAP44Q96MT7 982 aa19.95■□□□□ 0.78
PDE6D-203ENST00000428104 ZBTB1Q9Y2K1 713 aa19.95■□□□□ 0.78
PDE6D-203ENST00000428104 AMOTQ4VCS5 1084 aa19.94■□□□□ 0.78
PDE6D-203ENST00000428104 C1orf141Q5JVX7 400 aa19.94■□□□□ 0.78
PDE6D-203ENST00000428104 CLEC11AQ9Y240 323 aa19.94■□□□□ 0.78
PDE6D-203ENST00000428104 TNNT2P45379 298 aaPredicted RBP19.93■□□□□ 0.78
PDE6D-203ENST00000428104 FER1L6Q2WGJ9 1857 aa19.92■□□□□ 0.78
PDE6D-203ENST00000428104 DICER1Q9UPY3 1922 aaKnown RBP19.92■□□□□ 0.78
PDE6D-203ENST00000428104 MAP1SQ66K74 1059 aaPredicted RBP19.92■□□□□ 0.78
PDE6D-203ENST00000428104 ABT1Q9ULW3 272 aaKnown RBP19.92■□□□□ 0.78
PDE6D-203ENST00000428104 PDE6BP35913 854 aa19.91■□□□□ 0.78
PDE6D-203ENST00000428104 BRIP1Q9BX63 1249 aa19.91■□□□□ 0.78
PDE6D-203ENST00000428104 AEBP1Q8IUX7 1158 aa19.9■□□□□ 0.78
PDE6D-203ENST00000428104 CNTROBQ8N137 903 aa19.9■□□□□ 0.78
PDE6D-203ENST00000428104 HACL1Q9UJ83 578 aa19.9■□□□□ 0.78
PDE6D-203ENST00000428104 TSKSQ9UJT2 592 aa19.9■□□□□ 0.78
PDE6D-203ENST00000428104 ZNF541Q9H0D2 1346 aa19.9■□□□□ 0.78
PDE6D-203ENST00000428104 COL11A2P13942 1736 aaPredicted RBP19.89■□□□□ 0.77
PDE6D-203ENST00000428104 EPHX2P34913 555 aa19.89■□□□□ 0.77
PDE6D-203ENST00000428104 PRR5LQ6MZQ0 368 aa19.89■□□□□ 0.77
PDE6D-203ENST00000428104 PRPF40BQ6NWY9 871 aaKnown RBP19.89■□□□□ 0.77
PDE6D-203ENST00000428104 BEGAINQ9BUH8 593 aa19.89■□□□□ 0.77
PDE6D-203ENST00000428104 PDZRN3Q9UPQ7 1066 aa19.89■□□□□ 0.77
PDE6D-203ENST00000428104 GRM1Q13255 1194 aa19.88■□□□□ 0.77
PDE6D-203ENST00000428104 SLC39A6Q13433 755 aa19.88■□□□□ 0.77
PDE6D-203ENST00000428104 TBC1D9BQ66K14 1250 aa19.88■□□□□ 0.77
PDE6D-203ENST00000428104 ANKRD31Q8N7Z5 1873 aa19.88■□□□□ 0.77
PDE6D-203ENST00000428104 CANXP27824 592 aaKnown RBP19.87■□□□□ 0.77
PDE6D-203ENST00000428104 PAXIP1Q6ZW49 1069 aaPredicted RBP19.87■□□□□ 0.77
PDE6D-203ENST00000428104 CAPNS2Q96L46 248 aa19.87■□□□□ 0.77
PDE6D-203ENST00000428104 MCOLN1Q9GZU1 580 aa19.87■□□□□ 0.77
PDE6D-203ENST00000428104 SCN4AP35499 1836 aa19.87■□□□□ 0.77
PDE6D-203ENST00000428104 ADAMTSL1Q8N6G6 1762 aa19.86■□□□□ 0.77
PDE6D-203ENST00000428104 CDCA8Q53HL2 280 aa19.86■□□□□ 0.77
PDE6D-203ENST00000428104 RNF123Q5XPI4 1314 aa19.85■□□□□ 0.77
PDE6D-203ENST00000428104 SOGA3Q5TF21 947 aa19.85■□□□□ 0.77
PDE6D-203ENST00000428104 CYP4F22Q6NT55 531 aa19.85■□□□□ 0.77
PDE6D-203ENST00000428104 CNKSR1Q969H4 720 aa19.85■□□□□ 0.77
PDE6D-203ENST00000428104 GPR101Q96P66 508 aaPredicted RBP19.85■□□□□ 0.77
PDE6D-203ENST00000428104 SLC52A2Q9HAB3 445 aa19.85■□□□□ 0.77
PDE6D-203ENST00000428104 THSD7BQ9C0I4 1608 aa19.84■□□□□ 0.77
PDE6D-203ENST00000428104 FMR1Q06787 632 aaKnown RBP eCLIP19.84■□□□□ 0.77
PDE6D-203ENST00000428104 PNMA8AQ86V59 439 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms