RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ADRA2BP18089 450 aa19.65■□□□□ 0.74
RTN4-210ENST00000427710 CANXP27824 592 aaKnown RBP19.65■□□□□ 0.74
RTN4-210ENST00000427710 RIPK4P57078 832 aa19.65■□□□□ 0.74
RTN4-210ENST00000427710 TAF7Q15545 349 aaPredicted RBP19.65■□□□□ 0.74
RTN4-210ENST00000427710 NEUROD2Q15784 382 aa19.65■□□□□ 0.74
RTN4-210ENST00000427710 SOS1Q07889 1333 aaPredicted RBP19.65■□□□□ 0.74
RTN4-210ENST00000427710 GYS1P13807 737 aa19.64■□□□□ 0.73
RTN4-210ENST00000427710 TMPOP42166 694 aaKnown RBP19.64■□□□□ 0.73
RTN4-210ENST00000427710 MMP10P09238 476 aa19.63■□□□□ 0.73
RTN4-210ENST00000427710 STARD3NLO95772 234 aa19.62■□□□□ 0.73
RTN4-210ENST00000427710 A1BGP04217 495 aa19.62■□□□□ 0.73
RTN4-210ENST00000427710 PIP4K2AP48426 406 aaPredicted RBP19.62■□□□□ 0.73
RTN4-210ENST00000427710 COL15A1P39059 1388 aa19.61■□□□□ 0.73
RTN4-210ENST00000427710 USP42Q9H9J4 1324 aaKnown RBP19.61■□□□□ 0.73
RTN4-210ENST00000427710 FKBP8Q14318 412 aa19.61■□□□□ 0.73
RTN4-210ENST00000427710 RUNDC1Q96C34 613 aa19.61■□□□□ 0.73
RTN4-210ENST00000427710 ZNF330Q9Y3S2 320 aaPredicted RBP19.61■□□□□ 0.73
RTN4-210ENST00000427710 USP16Q9Y5T5 823 aa19.61■□□□□ 0.73
RTN4-210ENST00000427710 USPL1Q5W0Q7 1092 aa19.6■□□□□ 0.73
RTN4-210ENST00000427710 PELP1Q8IZL8 1130 aaKnown RBP19.6■□□□□ 0.73
RTN4-210ENST00000427710 N4BP2Q86UW6 1770 aaPredicted RBP19.6■□□□□ 0.73
RTN4-210ENST00000427710 ANP32CO43423 234 aa19.59■□□□□ 0.73
RTN4-210ENST00000427710 NLGN1Q8N2Q7 840 aa19.59■□□□□ 0.73
RTN4-210ENST00000427710 TEX13AQ9BXU3 409 aaPredicted RBP19.59■□□□□ 0.73
RTN4-210ENST00000427710 AFDNP55196 1824 aaKnown RBP19.59■□□□□ 0.73
RTN4-210ENST00000427710 LAMB4A4D0S4 1761 aa19.58■□□□□ 0.73
RTN4-210ENST00000427710 SENP3-EIF4A1A0A087X0R7 540 aa19.58■□□□□ 0.72
RTN4-210ENST00000427710 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.72
RTN4-210ENST00000427710 ZPR1O75312 459 aa19.58■□□□□ 0.72
RTN4-210ENST00000427710 WWC3Q9ULE0 1092 aa19.58■□□□□ 0.72
RTN4-210ENST00000427710 CHD4Q14839 1912 aa19.58■□□□□ 0.72
RTN4-210ENST00000427710 KIF13BQ9NQT8 1826 aa19.58■□□□□ 0.72
RTN4-210ENST00000427710 SNRPA1P09661 255 aaKnown RBP19.57■□□□□ 0.72
RTN4-210ENST00000427710 EIF5P55010 431 aaKnown RBP19.57■□□□□ 0.72
RTN4-210ENST00000427710 UTRNP46939 3433 aa19.57■□□□□ 0.72
RTN4-210ENST00000427710 NARFQ9UHQ1 456 aa19.56■□□□□ 0.72
RTN4-210ENST00000427710 TRIM35Q9UPQ4 493 aa19.56■□□□□ 0.72
RTN4-210ENST00000427710 EIF4A1P60842 406 aaKnown RBP19.55■□□□□ 0.72
RTN4-210ENST00000427710 DDR1Q08345 913 aa19.55■□□□□ 0.72
RTN4-210ENST00000427710 GPR162Q16538 588 aa19.55■□□□□ 0.72
RTN4-210ENST00000427710 PNISRQ8TF01 805 aaKnown RBP19.55■□□□□ 0.72
RTN4-210ENST00000427710 BCL2L12Q9HB09 334 aa19.55■□□□□ 0.72
RTN4-210ENST00000427710 TSPYL4Q9UJ04 414 aa19.55■□□□□ 0.72
RTN4-210ENST00000427710 TBC1D2BQ9UPU7 963 aa19.55■□□□□ 0.72
RTN4-210ENST00000427710 CD2APQ9Y5K6 639 aa19.55■□□□□ 0.72
RTN4-210ENST00000427710 PARP3Q9Y6F1 533 aa19.55■□□□□ 0.72
RTN4-210ENST00000427710 GOLGB1Q14789 3259 aaKnown RBP19.55■□□□□ 0.72
RTN4-210ENST00000427710 KIAA1551Q9HCM1 1747 aa19.54■□□□□ 0.72
RTN4-210ENST00000427710 APAF1O14727 1248 aa19.54■□□□□ 0.72
RTN4-210ENST00000427710 SCN7AQ01118 1682 aa19.53■□□□□ 0.72
RTN4-210ENST00000427710 LMOD3Q0VAK6 560 aa19.53■□□□□ 0.72
RTN4-210ENST00000427710 MRS2Q9HD23 443 aa19.53■□□□□ 0.72
RTN4-210ENST00000427710 LAS1LQ9Y4W2 734 aaKnown RBP19.53■□□□□ 0.72
RTN4-210ENST00000427710 BCORQ6W2J9 1755 aa19.52■□□□□ 0.72
RTN4-210ENST00000427710 NBPF26B4DH59 902 aa19.52■□□□□ 0.72
RTN4-210ENST00000427710 TM4SF1P30408 202 aa19.52■□□□□ 0.72
RTN4-210ENST00000427710 IL6STP40189 918 aaPredicted RBP19.52■□□□□ 0.72
RTN4-210ENST00000427710 NBPF10Q6P3W6 841 aaKnown RBP19.52■□□□□ 0.72
RTN4-210ENST00000427710 BICDL1Q6ZP65 573 aa19.52■□□□□ 0.72
RTN4-210ENST00000427710 NBPF15Q8N660 670 aa19.52■□□□□ 0.72
RTN4-210ENST00000427710 A0A087WZG4 1122 aa19.51■□□□□ 0.71
RTN4-210ENST00000427710 POLRMTO00411 1230 aaKnown RBP19.51■□□□□ 0.71
RTN4-210ENST00000427710 GIGYF1O75420 1035 aaPredicted RBP19.51■□□□□ 0.71
RTN4-210ENST00000427710 YBX3P16989 372 aaKnown RBP eCLIP19.51■□□□□ 0.71
RTN4-210ENST00000427710 NFIXQ14938 502 aa19.51■□□□□ 0.71
RTN4-210ENST00000427710 C10orf71Q711Q0 1435 aa19.5■□□□□ 0.71
RTN4-210ENST00000427710 TBC1D9BQ66K14 1250 aa19.49■□□□□ 0.71
RTN4-210ENST00000427710 DZIP3Q86Y13 1208 aaKnown RBP19.49■□□□□ 0.71
RTN4-210ENST00000427710 NGEFQ8N5V2 710 aa19.49■□□□□ 0.71
RTN4-210ENST00000427710 BRCA1P38398 1863 aaKnown RBP19.48■□□□□ 0.71
RTN4-210ENST00000427710 A0A0G2JLW4 131 aa19.48■□□□□ 0.71
RTN4-210ENST00000427710 CAMTA2O94983 1202 aa19.48■□□□□ 0.71
RTN4-210ENST00000427710 KRT24Q2M2I5 525 aa19.48■□□□□ 0.71
RTN4-210ENST00000427710 NPM2Q86SE8 214 aaKnown RBP19.48■□□□□ 0.71
RTN4-210ENST00000427710 NRXN2Q9P2S2 1712 aa19.48■□□□□ 0.71
RTN4-210ENST00000427710 PXDNLA1KZ92 1463 aa19.48■□□□□ 0.71
RTN4-210ENST00000427710 NUP98P52948 1817 aa19.47■□□□□ 0.71
RTN4-210ENST00000427710 DPEP1P16444 411 aa19.46■□□□□ 0.71
RTN4-210ENST00000427710 EIF2S2P20042 333 aaKnown RBP19.46■□□□□ 0.71
RTN4-210ENST00000427710 YY1P25490 414 aa19.46■□□□□ 0.71
RTN4-210ENST00000427710 NECTIN2Q92692 538 aa19.46■□□□□ 0.71
RTN4-210ENST00000427710 CHL1O00533 1208 aa19.45■□□□□ 0.7
RTN4-210ENST00000427710 SERPINB2P05120 415 aa19.45■□□□□ 0.7
RTN4-210ENST00000427710 MYL6BP14649 208 aa19.45■□□□□ 0.7
RTN4-210ENST00000427710 ANKRD31Q8N7Z5 1873 aa19.45■□□□□ 0.7
RTN4-210ENST00000427710 CCDC24Q8N4L8 307 aa19.44■□□□□ 0.7
RTN4-210ENST00000427710 BABAM1Q9NWV8 329 aa19.44■□□□□ 0.7
RTN4-210ENST00000427710 ANXA1P04083 346 aa19.43■□□□□ 0.7
RTN4-210ENST00000427710 CHRNA5P30532 468 aa19.43■□□□□ 0.7
RTN4-210ENST00000427710 CARMIL3Q8ND23 1372 aa19.43■□□□□ 0.7
RTN4-210ENST00000427710 TGFB2P61812 414 aa19.42■□□□□ 0.7
RTN4-210ENST00000427710 TTLL7Q6ZT98 887 aa19.42■□□□□ 0.7
RTN4-210ENST00000427710 HLFQ16534 295 aa19.41■□□□□ 0.7
RTN4-210ENST00000427710 PROSER3Q2NL68 480 aa19.41■□□□□ 0.7
RTN4-210ENST00000427710 FAM9BQ8IZU0 186 aa19.41■□□□□ 0.7
RTN4-210ENST00000427710 MBIPQ9NS73 344 aa19.41■□□□□ 0.7
RTN4-210ENST00000427710 SALL2Q9Y467 1007 aaPredicted RBP19.41■□□□□ 0.7
RTN4-210ENST00000427710 CACNA1SQ13698 1873 aa19.41■□□□□ 0.7
RTN4-210ENST00000427710 KCNA3P22001 575 aa19.4■□□□□ 0.7
RTN4-210ENST00000427710 CFAP44Q96MT7 982 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms