RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 SPATA31A7Q8IWB4 1347 aa21.84■■□□□ 1.09
FN1-208ENST00000426059 DDX21Q9NR30 783 aaKnown RBP eCLIP21.83■■□□□ 1.08
FN1-208ENST00000426059 NWD2Q9ULI1 1742 aa21.82■■□□□ 1.08
FN1-208ENST00000426059 ADCY9O60503 1353 aa21.82■■□□□ 1.08
FN1-208ENST00000426059 PIGBQ92521 554 aa21.82■■□□□ 1.08
FN1-208ENST00000426059 UNC5CLQ8IV45 518 aa21.82■■□□□ 1.08
FN1-208ENST00000426059 DNAAF4Q8WXU2 420 aa21.82■■□□□ 1.08
FN1-208ENST00000426059 SYTL4Q96C24 671 aaPredicted RBP21.82■■□□□ 1.08
FN1-208ENST00000426059 ASAP1Q9ULH1 1129 aa21.82■■□□□ 1.08
FN1-208ENST00000426059 GLI3P10071 1580 aa21.82■■□□□ 1.08
FN1-208ENST00000426059 LRP6O75581 1613 aa21.81■■□□□ 1.08
FN1-208ENST00000426059 DDB1Q16531 1140 aa21.81■■□□□ 1.08
FN1-208ENST00000426059 SMC5Q8IY18 1101 aa21.81■■□□□ 1.08
FN1-208ENST00000426059 HYPKQ9NX55 129 aa21.81■■□□□ 1.08
FN1-208ENST00000426059 MAP3K2Q9Y2U5 619 aa21.81■■□□□ 1.08
FN1-208ENST00000426059 ITGB4P16144 1822 aa21.81■■□□□ 1.08
FN1-208ENST00000426059 THRAP3Q9Y2W1 955 aaKnown RBP21.8■■□□□ 1.08
FN1-208ENST00000426059 ATP10DQ9P241 1426 aa21.8■■□□□ 1.08
FN1-208ENST00000426059 CEP85Q6P2H3 762 aa21.8■■□□□ 1.08
FN1-208ENST00000426059 TNS2Q63HR2 1409 aa21.79■■□□□ 1.08
FN1-208ENST00000426059 BCL9LQ86UU0 1499 aa21.79■■□□□ 1.08
FN1-208ENST00000426059 KCPQ6ZWJ8 1503 aa21.79■■□□□ 1.08
FN1-208ENST00000426059 UBR2Q8IWV8 1755 aa21.79■■□□□ 1.08
FN1-208ENST00000426059 A0A0G2JS52 829 aa21.79■■□□□ 1.08
FN1-208ENST00000426059 PDE4AP27815 886 aa21.79■■□□□ 1.08
FN1-208ENST00000426059 FAM98CQ17RN3 349 aaKnown RBP21.79■■□□□ 1.08
FN1-208ENST00000426059 SRCIN1Q9C0H9 1055 aa21.79■■□□□ 1.08
FN1-208ENST00000426059 USP44Q9H0E7 712 aa21.79■■□□□ 1.08
FN1-208ENST00000426059 PAPPAQ13219 1627 aa21.78■■□□□ 1.08
FN1-208ENST00000426059 BEND3Q5T5X7 828 aa21.78■■□□□ 1.08
FN1-208ENST00000426059 BCL11AQ9H165 835 aa21.78■■□□□ 1.08
FN1-208ENST00000426059 COPS6Q7L5N1 327 aa21.77■■□□□ 1.08
FN1-208ENST00000426059 ANKRD44Q8N8A2 993 aa21.77■■□□□ 1.08
FN1-208ENST00000426059 XAGE3Q8WTP9 111 aa21.77■■□□□ 1.08
FN1-208ENST00000426059 KSR2Q6VAB6 950 aa21.77■■□□□ 1.08
FN1-208ENST00000426059 PXDNLA1KZ92 1463 aa21.77■■□□□ 1.08
FN1-208ENST00000426059 PRIM1P49642 420 aaKnown RBP21.76■■□□□ 1.07
FN1-208ENST00000426059 MARCH10Q8NA82 808 aaPredicted RBP21.76■■□□□ 1.07
FN1-208ENST00000426059 N4BP2Q86UW6 1770 aaPredicted RBP21.76■■□□□ 1.07
FN1-208ENST00000426059 SPATA31A6Q5VVP1 1343 aa21.76■■□□□ 1.07
FN1-208ENST00000426059 LRP10Q7Z4F1 713 aa21.76■■□□□ 1.07
FN1-208ENST00000426059 ACSBG1Q96GR2 724 aa21.76■■□□□ 1.07
FN1-208ENST00000426059 CDCA7Q9BWT1 371 aaPredicted RBP21.76■■□□□ 1.07
FN1-208ENST00000426059 LNPKQ9C0E8 428 aa21.76■■□□□ 1.07
FN1-208ENST00000426059 ATG3Q9NT62 314 aa21.76■■□□□ 1.07
FN1-208ENST00000426059 A1BGP04217 495 aa21.75■■□□□ 1.07
FN1-208ENST00000426059 GNAI2P04899 355 aa21.75■■□□□ 1.07
FN1-208ENST00000426059 CWF19L2Q2TBE0 894 aaKnown RBP21.75■■□□□ 1.07
FN1-208ENST00000426059 ANKRD45Q5TZF3 282 aa21.75■■□□□ 1.07
FN1-208ENST00000426059 RPAP2Q8IXW5 612 aaPredicted RBP21.75■■□□□ 1.07
FN1-208ENST00000426059 RBM42Q9BTD8 480 aaKnown RBP21.75■■□□□ 1.07
FN1-208ENST00000426059 LRRFIP2Q9Y608 721 aaKnown RBP21.75■■□□□ 1.07
FN1-208ENST00000426059 NBPF26B4DH59 902 aa21.74■■□□□ 1.07
FN1-208ENST00000426059 NBPF7P0C2Y1 421 aaPredicted RBP21.74■■□□□ 1.07
FN1-208ENST00000426059 NBPF14Q5TI25 921 aa21.74■■□□□ 1.07
FN1-208ENST00000426059 NBPF10Q6P3W6 841 aaKnown RBP21.74■■□□□ 1.07
FN1-208ENST00000426059 NBPF15Q8N660 670 aa21.74■■□□□ 1.07
FN1-208ENST00000426059 USP21Q9UK80 565 aa21.74■■□□□ 1.07
FN1-208ENST00000426059 LAMB4A4D0S4 1761 aa21.74■■□□□ 1.07
FN1-208ENST00000426059 GNAI3P08754 354 aa21.74■■□□□ 1.07
FN1-208ENST00000426059 NUCB1Q02818 461 aa21.74■■□□□ 1.07
FN1-208ENST00000426059 BARGINQ6ZT62 677 aa21.74■■□□□ 1.07
FN1-208ENST00000426059 RIC3Q7Z5B4 369 aa21.74■■□□□ 1.07
FN1-208ENST00000426059 FNBP4Q8N3X1 1017 aaPredicted RBP21.74■■□□□ 1.07
FN1-208ENST00000426059 BACH2Q9BYV9 841 aa21.74■■□□□ 1.07
FN1-208ENST00000426059 MEX3CQ5U5Q3 659 aaKnown RBP21.73■■□□□ 1.07
FN1-208ENST00000426059 DOT1LQ8TEK3 1739 aa21.73■■□□□ 1.07
FN1-208ENST00000426059 UBTFL1P0CB47 393 aaPredicted RBP21.73■■□□□ 1.07
FN1-208ENST00000426059 VPS72Q15906 364 aa21.73■■□□□ 1.07
FN1-208ENST00000426059 GCC1Q96CN9 775 aa21.73■■□□□ 1.07
FN1-208ENST00000426059 BCL9O00512 1426 aa21.73■■□□□ 1.07
FN1-208ENST00000426059 APBB1O00213 710 aa21.72■■□□□ 1.07
FN1-208ENST00000426059 DDX58O95786 925 aaKnown RBP21.72■■□□□ 1.07
FN1-208ENST00000426059 CHD1LQ86WJ1 897 aa21.72■■□□□ 1.07
FN1-208ENST00000426059 PNMA6EA0A0J9YXQ4 647 aa21.7■■□□□ 1.07
FN1-208ENST00000426059 DNAJC10Q8IXB1 793 aa21.7■■□□□ 1.07
FN1-208ENST00000426059 DCTPP1Q9H773 170 aa21.7■■□□□ 1.07
FN1-208ENST00000426059 ANKRD13DQ6ZTN6 518 aa21.7■■□□□ 1.06
FN1-208ENST00000426059 C8orf34Q49A92 452 aa21.69■■□□□ 1.06
FN1-208ENST00000426059 SLC4A9Q96Q91 983 aa21.69■■□□□ 1.06
FN1-208ENST00000426059 MYD88Q99836 296 aa21.68■■□□□ 1.06
FN1-208ENST00000426059 ZNF330Q9Y3S2 320 aaPredicted RBP21.68■■□□□ 1.06
FN1-208ENST00000426059 IGKV5-2P06315 115 aa21.68■■□□□ 1.06
FN1-208ENST00000426059 FAM161AQ3B820 660 aa21.67■■□□□ 1.06
FN1-208ENST00000426059 TTLL7Q6ZT98 887 aa21.67■■□□□ 1.06
FN1-208ENST00000426059 C9orf78Q9NZ63 289 aaPredicted RBP21.67■■□□□ 1.06
FN1-208ENST00000426059 LINS1Q8NG48 757 aa21.67■■□□□ 1.06
FN1-208ENST00000426059 KCNQ2O43526 872 aa21.66■■□□□ 1.06
FN1-208ENST00000426059 SMARCA5O60264 1052 aaPredicted RBP21.66■■□□□ 1.06
FN1-208ENST00000426059 ATP8B2P98198 1209 aa21.66■■□□□ 1.06
FN1-208ENST00000426059 AFF2P51816 1311 aa21.66■■□□□ 1.06
FN1-208ENST00000426059 ALDH1L1O75891 902 aa21.65■■□□□ 1.06
FN1-208ENST00000426059 METTL22Q9BUU2 404 aaPredicted RBP21.65■■□□□ 1.06
FN1-208ENST00000426059 EXOC6BQ9Y2D4 811 aa21.65■■□□□ 1.06
FN1-208ENST00000426059 ATP5J2-PTCD1G3V325 749 aa21.65■■□□□ 1.06
FN1-208ENST00000426059 HMMRO75330 724 aa21.65■■□□□ 1.06
FN1-208ENST00000426059 FAM182BQ5T319 152 aa21.65■■□□□ 1.06
FN1-208ENST00000426059 C16orf71Q8IYS4 520 aaPredicted RBP21.64■■□□□ 1.05
FN1-208ENST00000426059 JARID2Q92833 1246 aaPredicted RBP21.64■■□□□ 1.05
FN1-208ENST00000426059 NEXNQ0ZGT2 675 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms