RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 NFIXQ14938 502 aa22.95■■□□□ 1.26
CHCHD3-202ENST00000423635 PANK3Q9H999 370 aa22.95■■□□□ 1.26
CHCHD3-202ENST00000423635 CYP19A1P11511 503 aaPredicted RBP22.94■■□□□ 1.26
CHCHD3-202ENST00000423635 AKAP4Q5JQC9 854 aa22.94■■□□□ 1.26
CHCHD3-202ENST00000423635 POLR3GLQ9BT43 218 aa22.94■■□□□ 1.26
CHCHD3-202ENST00000423635 TTLL6Q8N841 843 aa22.93■■□□□ 1.26
CHCHD3-202ENST00000423635 SLC52A2Q9HAB3 445 aa22.93■■□□□ 1.26
CHCHD3-202ENST00000423635 CAPN15O75808 1086 aa22.92■■□□□ 1.26
CHCHD3-202ENST00000423635 SERPINB2P05120 415 aa22.92■■□□□ 1.26
CHCHD3-202ENST00000423635 IL13P35225 146 aa22.92■■□□□ 1.26
CHCHD3-202ENST00000423635 NRXN2Q9P2S2 1712 aa22.92■■□□□ 1.26
CHCHD3-202ENST00000423635 SCN11AQ9UI33 1791 aa22.91■■□□□ 1.26
CHCHD3-202ENST00000423635 BCL2L12Q9HB09 334 aa22.91■■□□□ 1.26
CHCHD3-202ENST00000423635 LGR6Q9HBX8 967 aa22.91■■□□□ 1.26
CHCHD3-202ENST00000423635 MORC1Q86VD1 984 aa22.9■■□□□ 1.26
CHCHD3-202ENST00000423635 AFDNP55196 1824 aaKnown RBP22.9■■□□□ 1.26
CHCHD3-202ENST00000423635 POTECB2RU33 542 aa22.89■■□□□ 1.26
CHCHD3-202ENST00000423635 HSPA1AP0DMV8 641 aaKnown RBP22.89■■□□□ 1.26
CHCHD3-202ENST00000423635 HSPA1BP0DMV9 641 aaKnown RBP22.89■■□□□ 1.26
CHCHD3-202ENST00000423635 COL15A1P39059 1388 aa22.89■■□□□ 1.25
CHCHD3-202ENST00000423635 VSIG10Q8N0Z9 540 aa22.88■■□□□ 1.25
CHCHD3-202ENST00000423635 ZBTB1Q9Y2K1 713 aa22.88■■□□□ 1.25
CHCHD3-202ENST00000423635 H0YIN7 160 aa22.87■■□□□ 1.25
CHCHD3-202ENST00000423635 NFKBIEO00221 500 aa22.87■■□□□ 1.25
CHCHD3-202ENST00000423635 RNMTO43148 476 aaKnown RBP22.87■■□□□ 1.25
CHCHD3-202ENST00000423635 SLC39A6Q13433 755 aa22.87■■□□□ 1.25
CHCHD3-202ENST00000423635 C2CD5Q86YS7 1000 aa22.87■■□□□ 1.25
CHCHD3-202ENST00000423635 DLEC1Q9Y238 1755 aa22.87■■□□□ 1.25
CHCHD3-202ENST00000423635 DPY19L2Q6NUT2 758 aa22.86■■□□□ 1.25
CHCHD3-202ENST00000423635 MRC1P22897 1456 aa22.84■■□□□ 1.25
CHCHD3-202ENST00000423635 PDZRN3Q9UPQ7 1066 aa22.83■■□□□ 1.25
CHCHD3-202ENST00000423635 CCDC88AQ3V6T2 1871 aa22.82■■□□□ 1.24
CHCHD3-202ENST00000423635 CARMIL3Q8ND23 1372 aa22.82■■□□□ 1.24
CHCHD3-202ENST00000423635 EIF5P55010 431 aaKnown RBP22.82■■□□□ 1.24
CHCHD3-202ENST00000423635 EIF4G2P78344 907 aaKnown RBP eCLIP22.81■■□□□ 1.242e-10■■■■□ 24.2
CHCHD3-202ENST00000423635 BRIP1Q9BX63 1249 aa22.81■■□□□ 1.24
CHCHD3-202ENST00000423635 A0A087WZG4 1122 aa22.8■■□□□ 1.24
CHCHD3-202ENST00000423635 CANXP27824 592 aaKnown RBP22.8■■□□□ 1.24
CHCHD3-202ENST00000423635 TIAM2Q8IVF5 1701 aa22.8■■□□□ 1.24
CHCHD3-202ENST00000423635 PDE6BP35913 854 aa22.79■■□□□ 1.24
CHCHD3-202ENST00000423635 MTHFSDQ2M296 383 aaKnown RBP22.79■■□□□ 1.24
CHCHD3-202ENST00000423635 ERFEQ4G0M1 354 aa22.79■■□□□ 1.24
CHCHD3-202ENST00000423635 BICDL1Q6ZP65 573 aa22.79■■□□□ 1.24
CHCHD3-202ENST00000423635 CREBZFQ9NS37 354 aa22.79■■□□□ 1.24
CHCHD3-202ENST00000423635 KNSTRNQ9Y448 316 aa22.79■■□□□ 1.24
CHCHD3-202ENST00000423635 C21orf2O43822 256 aa22.78■■□□□ 1.24
CHCHD3-202ENST00000423635 STARD3NLO95772 234 aa22.78■■□□□ 1.24
CHCHD3-202ENST00000423635 HSPA5P11021 654 aaKnown RBP22.78■■□□□ 1.24
CHCHD3-202ENST00000423635 TBC1D9BQ66K14 1250 aa22.78■■□□□ 1.24
CHCHD3-202ENST00000423635 ZNF622Q969S3 477 aaKnown RBP eCLIP22.78■■□□□ 1.247e-19■□□□□ 8.6
CHCHD3-202ENST00000423635 LTBP3Q9NS15 1303 aa22.77■■□□□ 1.24
CHCHD3-202ENST00000423635 CHADLQ6NUI6 762 aa22.77■■□□□ 1.24
CHCHD3-202ENST00000423635 HMOX1P09601 288 aa22.76■■□□□ 1.23
CHCHD3-202ENST00000423635 PRR5LQ6MZQ0 368 aa22.75■■□□□ 1.23
CHCHD3-202ENST00000423635 DICER1Q9UPY3 1922 aaKnown RBP22.75■■□□□ 1.23
CHCHD3-202ENST00000423635 CLSPNQ9HAW4 1339 aa22.74■■□□□ 1.23
CHCHD3-202ENST00000423635 FER1L6Q2WGJ9 1857 aa22.74■■□□□ 1.23
CHCHD3-202ENST00000423635 TRIM26Q12899 539 aaPredicted RBP22.74■■□□□ 1.23
CHCHD3-202ENST00000423635 AMER1Q5JTC6 1135 aaPredicted RBP22.74■■□□□ 1.23
CHCHD3-202ENST00000423635 TEX13AQ9BXU3 409 aaPredicted RBP22.74■■□□□ 1.23
CHCHD3-202ENST00000423635 ANKRD31Q8N7Z5 1873 aa22.73■■□□□ 1.23
CHCHD3-202ENST00000423635 TTC5Q8N0Z6 440 aa22.73■■□□□ 1.23
CHCHD3-202ENST00000423635 TAOK3Q9H2K8 898 aa22.73■■□□□ 1.23
CHCHD3-202ENST00000423635 UBR2Q8IWV8 1755 aa22.73■■□□□ 1.23
CHCHD3-202ENST00000423635 VIRMAQ69YN4 1812 aaKnown RBP22.72■■□□□ 1.23
CHCHD3-202ENST00000423635 DDNO94850 711 aaPredicted RBP22.72■■□□□ 1.23
CHCHD3-202ENST00000423635 ZNF219Q9P2Y4 722 aaPredicted RBP22.72■■□□□ 1.23
CHCHD3-202ENST00000423635 MKRN1Q9UHC7 482 aaKnown RBP22.72■■□□□ 1.23
CHCHD3-202ENST00000423635 POTEIP0CG38 1075 aa22.71■■□□□ 1.23
CHCHD3-202ENST00000423635 POTEJP0CG39 1038 aa22.71■■□□□ 1.23
CHCHD3-202ENST00000423635 IL6STP40189 918 aaPredicted RBP22.71■■□□□ 1.23
CHCHD3-202ENST00000423635 CNKSR1Q969H4 720 aa22.71■■□□□ 1.23
CHCHD3-202ENST00000423635 ZNF496Q96IT1 587 aaPredicted RBP22.71■■□□□ 1.23
CHCHD3-202ENST00000423635 TBC1D2BQ9UPU7 963 aa22.71■■□□□ 1.23
CHCHD3-202ENST00000423635 STYK1Q6J9G0 422 aa22.7■■□□□ 1.22
CHCHD3-202ENST00000423635 CCDC24Q8N4L8 307 aa22.7■■□□□ 1.22
CHCHD3-202ENST00000423635 PASKQ96RG2 1323 aa22.7■■□□□ 1.22
CHCHD3-202ENST00000423635 HEG1Q9ULI3 1381 aa22.69■■□□□ 1.22
CHCHD3-202ENST00000423635 SRGNP10124 158 aa22.69■■□□□ 1.22
CHCHD3-202ENST00000423635 SOGA3Q5TF21 947 aa22.69■■□□□ 1.22
CHCHD3-202ENST00000423635 ZNF790Q6PG37 636 aa22.69■■□□□ 1.22
CHCHD3-202ENST00000423635 CNTNAP1P78357 1384 aa22.68■■□□□ 1.22
CHCHD3-202ENST00000423635 DIAPH1O60610 1272 aaKnown RBP22.68■■□□□ 1.22
CHCHD3-202ENST00000423635 SETDB2Q96T68 719 aa22.68■■□□□ 1.22
CHCHD3-202ENST00000423635 PRDM10Q9NQV6 1147 aa22.68■■□□□ 1.22
CHCHD3-202ENST00000423635 IQCA1LA6NCM1 817 aa22.67■■□□□ 1.22
CHCHD3-202ENST00000423635 FOXN1O15353 648 aa22.67■■□□□ 1.22
CHCHD3-202ENST00000423635 IL17REQ8NFR9 667 aa22.67■■□□□ 1.22
CHCHD3-202ENST00000423635 L3MBTL3Q96JM7 780 aaPredicted RBP22.67■■□□□ 1.22
CHCHD3-202ENST00000423635 CAMTA2O94983 1202 aa22.66■■□□□ 1.22
CHCHD3-202ENST00000423635 PRPF40BQ6NWY9 871 aaKnown RBP22.66■■□□□ 1.22
CHCHD3-202ENST00000423635 LDHDQ86WU2 507 aa22.66■■□□□ 1.22
CHCHD3-202ENST00000423635 CNBD1Q8NA66 436 aa22.66■■□□□ 1.22
CHCHD3-202ENST00000423635 MASTLQ96GX5 879 aa22.66■■□□□ 1.22
CHCHD3-202ENST00000423635 COL11A2P13942 1736 aaPredicted RBP22.66■■□□□ 1.22
CHCHD3-202ENST00000423635 C7orf43Q8WVR3 580 aa22.65■■□□□ 1.22
CHCHD3-202ENST00000423635 SLX4Q8IY92 1834 aa22.65■■□□□ 1.22
CHCHD3-202ENST00000423635 SCN7AQ01118 1682 aa22.65■■□□□ 1.22
CHCHD3-202ENST00000423635 ST5P78524 1137 aa22.64■■□□□ 1.22
CHCHD3-202ENST00000423635 TEFQ10587 303 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms