RNA–Protein interactions for RNA: ENST00000422465.6

RPS3-202, Transcript of ribosomal protein S3, humanhuman

TSL 2

Gene RPS3, Length 903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-202ENST00000422465 USP35Q9P2H5 1018 aa13.32□□□□□ -0.28
RPS3-202ENST00000422465 COG6Q9Y2V7 657 aa13.32□□□□□ -0.28
RPS3-202ENST00000422465 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
RPS3-202ENST00000422465 FRAT1Q92837 279 aaPredicted RBP13.31□□□□□ -0.28
RPS3-202ENST00000422465 TSR2Q969E8 191 aaKnown RBP13.31□□□□□ -0.28
RPS3-202ENST00000422465 ACEP12821 1306 aa13.31□□□□□ -0.28
RPS3-202ENST00000422465 USP31Q70CQ4 1352 aa13.31□□□□□ -0.28
RPS3-202ENST00000422465 OVOS2A0A0G2JMS6 1433 aa13.3□□□□□ -0.28
RPS3-202ENST00000422465 CASZ1Q86V15 1759 aa13.3□□□□□ -0.28
RPS3-202ENST00000422465 IGHDP01880 384 aa13.3□□□□□ -0.28
RPS3-202ENST00000422465 NEFMP07197 916 aa13.3□□□□□ -0.28
RPS3-202ENST00000422465 RLBP1P12271 317 aa13.3□□□□□ -0.28
RPS3-202ENST00000422465 ZKSCAN2Q63HK3 967 aa13.3□□□□□ -0.28
RPS3-202ENST00000422465 SKAP1Q86WV1 359 aa13.3□□□□□ -0.28
RPS3-202ENST00000422465 NOP58Q9Y2X3 529 aaKnown RBP13.3□□□□□ -0.28
RPS3-202ENST00000422465 PARP4Q9UKK3 1724 aaKnown RBP13.3□□□□□ -0.28
RPS3-202ENST00000422465 PPM1GO15355 546 aaPredicted RBP13.29□□□□□ -0.28
RPS3-202ENST00000422465 ZC3H6P61129 1189 aaKnown RBP13.29□□□□□ -0.28
RPS3-202ENST00000422465 CALD1Q05682 793 aaKnown RBP13.29□□□□□ -0.28
RPS3-202ENST00000422465 ERICH6Q7L0X2 663 aa13.29□□□□□ -0.28
RPS3-202ENST00000422465 BRPF1P55201 1214 aaPredicted RBP13.28□□□□□ -0.28
RPS3-202ENST00000422465 MVPQ14764 893 aaKnown RBP13.28□□□□□ -0.28
RPS3-202ENST00000422465 ALDH1L2Q3SY69 923 aa13.28□□□□□ -0.28
RPS3-202ENST00000422465 SLAIN1Q8ND83 568 aa13.28□□□□□ -0.28
RPS3-202ENST00000422465 ZNF428Q96B54 188 aa13.28□□□□□ -0.28
RPS3-202ENST00000422465 PHACTR3Q96KR7 559 aa13.28□□□□□ -0.28
RPS3-202ENST00000422465 CRISPLD2Q9H0B8 497 aa13.28□□□□□ -0.28
RPS3-202ENST00000422465 TNNQ9UQP3 1299 aa13.28□□□□□ -0.28
RPS3-202ENST00000422465 CHD4Q14839 1912 aa13.28□□□□□ -0.28
RPS3-202ENST00000422465 TTC21AQ8NDW8 1320 aa13.28□□□□□ -0.28
RPS3-202ENST00000422465 CPDO75976 1380 aa13.28□□□□□ -0.28
RPS3-202ENST00000422465 KIF3CO14782 793 aa13.27□□□□□ -0.29
RPS3-202ENST00000422465 RRS1Q15050 365 aaKnown RBP13.27□□□□□ -0.29
RPS3-202ENST00000422465 FAM161AQ3B820 660 aa13.27□□□□□ -0.29
RPS3-202ENST00000422465 LARP1Q6PKG0 1096 aaKnown RBP13.27□□□□□ -0.29
RPS3-202ENST00000422465 DZIP1LQ8IYY4 767 aaKnown RBP13.27□□□□□ -0.29
RPS3-202ENST00000422465 SSH1Q8WYL5 1049 aa13.27□□□□□ -0.29
RPS3-202ENST00000422465 BCL2L13Q9BXK5 485 aa13.27□□□□□ -0.29
RPS3-202ENST00000422465 C2orf72A6NCS6 295 aa13.26□□□□□ -0.29
RPS3-202ENST00000422465 HMOX1P09601 288 aa13.26□□□□□ -0.29
RPS3-202ENST00000422465 ZNF853P0CG23 659 aa13.26□□□□□ -0.29
RPS3-202ENST00000422465 PTGER2P43116 358 aa13.26□□□□□ -0.29
RPS3-202ENST00000422465 LMOD3Q0VAK6 560 aa13.26□□□□□ -0.29
RPS3-202ENST00000422465 SYT17Q9BSW7 474 aa13.26□□□□□ -0.29
RPS3-202ENST00000422465 SMC4Q9NTJ3 1288 aa13.26□□□□□ -0.29
RPS3-202ENST00000422465 IFT57Q9NWB7 429 aa13.26□□□□□ -0.29
RPS3-202ENST00000422465 PEAK1Q9H792 1746 aa13.25□□□□□ -0.29
RPS3-202ENST00000422465 LMO7Q8WWI1 1683 aa13.25□□□□□ -0.29
RPS3-202ENST00000422465 GNAI1P63096 354 aa13.25□□□□□ -0.29
RPS3-202ENST00000422465 C8orf34Q49A92 452 aa13.25□□□□□ -0.29
RPS3-202ENST00000422465 ANO8Q9HCE9 1232 aaPredicted RBP13.25□□□□□ -0.29
RPS3-202ENST00000422465 PCDHB15Q9Y5E8 787 aa13.25□□□□□ -0.29
RPS3-202ENST00000422465 UTRNP46939 3433 aa13.25□□□□□ -0.29
RPS3-202ENST00000422465 KIF16BQ96L93 1317 aa13.24□□□□□ -0.29
RPS3-202ENST00000422465 ZBTB7AO95365 584 aa13.24□□□□□ -0.29
RPS3-202ENST00000422465 TRIM27P14373 513 aa13.24□□□□□ -0.29
RPS3-202ENST00000422465 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
RPS3-202ENST00000422465 ATF7IPQ6VMQ6 1270 aa13.24□□□□□ -0.29
RPS3-202ENST00000422465 TMC2Q8TDI7 906 aa13.24□□□□□ -0.29
RPS3-202ENST00000422465 FHDC1Q9C0D6 1143 aaPredicted RBP13.24□□□□□ -0.29
RPS3-202ENST00000422465 MTFR1LQ9H019 292 aa13.24□□□□□ -0.29
RPS3-202ENST00000422465 GPHNQ9NQX3 736 aaPredicted RBP13.24□□□□□ -0.29
RPS3-202ENST00000422465 STK32BQ9NY57 414 aa13.24□□□□□ -0.29
RPS3-202ENST00000422465 USP54Q70EL1 1684 aa13.24□□□□□ -0.29
RPS3-202ENST00000422465 DLG5Q8TDM6 1919 aa13.23□□□□□ -0.29
RPS3-202ENST00000422465 BCL9O00512 1426 aa13.23□□□□□ -0.29
RPS3-202ENST00000422465 CRB1P82279 1406 aa13.23□□□□□ -0.29
RPS3-202ENST00000422465 IPO8O15397 1037 aaKnown RBP13.23□□□□□ -0.29
RPS3-202ENST00000422465 GIGYF1O75420 1035 aaPredicted RBP13.23□□□□□ -0.29
RPS3-202ENST00000422465 DDB1Q16531 1140 aa13.23□□□□□ -0.29
RPS3-202ENST00000422465 FTSJ3Q8IY81 847 aaKnown RBP13.23□□□□□ -0.29
RPS3-202ENST00000422465 RWDD1Q9H446 243 aaPredicted RBP13.23□□□□□ -0.29
RPS3-202ENST00000422465 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
RPS3-202ENST00000422465 SBF2Q86WG5 1849 aa13.23□□□□□ -0.29
RPS3-202ENST00000422465 MAP3K5Q99683 1374 aa13.22□□□□□ -0.29
RPS3-202ENST00000422465 NOB1Q9ULX3 412 aaKnown RBP13.22□□□□□ -0.29
RPS3-202ENST00000422465 DDX19BQ9UMR2 479 aa13.22□□□□□ -0.29
RPS3-202ENST00000422465 USP19O94966 1318 aa13.21□□□□□ -0.29
RPS3-202ENST00000422465 VAMP4O75379 141 aa13.21□□□□□ -0.29
RPS3-202ENST00000422465 RGS3P49796 1198 aa13.21□□□□□ -0.29
RPS3-202ENST00000422465 NUTM2GQ5VZR2 741 aa13.21□□□□□ -0.29
RPS3-202ENST00000422465 ABTB2Q8N961 1025 aa13.21□□□□□ -0.29
RPS3-202ENST00000422465 CDCA7Q9BWT1 371 aaPredicted RBP13.21□□□□□ -0.29
RPS3-202ENST00000422465 VIRMAQ69YN4 1812 aaKnown RBP13.2□□□□□ -0.3
RPS3-202ENST00000422465 HDAC1Q13547 482 aaPredicted RBP13.2□□□□□ -0.3
RPS3-202ENST00000422465 SLC15A2Q16348 729 aa13.2□□□□□ -0.3
RPS3-202ENST00000422465 NPM2Q86SE8 214 aaKnown RBP13.2□□□□□ -0.3
RPS3-202ENST00000422465 MRPL50Q8N5N7 158 aaKnown RBP13.2□□□□□ -0.3
RPS3-202ENST00000422465 ARHGAP45Q92619 1136 aa13.2□□□□□ -0.3
RPS3-202ENST00000422465 DDRGK1Q96HY6 314 aa13.2□□□□□ -0.3
RPS3-202ENST00000422465 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
RPS3-202ENST00000422465 PIK3C2AO00443 1686 aa13.2□□□□□ -0.3
RPS3-202ENST00000422465 LRRC37A3O60309 1634 aa13.2□□□□□ -0.3
RPS3-202ENST00000422465 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
RPS3-202ENST00000422465 PDGFDQ9GZP0 370 aaPredicted RBP13.19□□□□□ -0.3
RPS3-202ENST00000422465 MBIPQ9NS73 344 aa13.19□□□□□ -0.3
RPS3-202ENST00000422465 KIF24Q5T7B8 1368 aa13.19□□□□□ -0.3
RPS3-202ENST00000422465 GCP02774 474 aa13.18□□□□□ -0.3
RPS3-202ENST00000422465 DSG2Q14126 1118 aa13.18□□□□□ -0.3
RPS3-202ENST00000422465 TXNRD1Q16881 649 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms