RNA–Protein interactions for RNA: ENST00000422026.1

SSX2IP-202, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-202ENST00000422026 FLIIQ13045 1269 aa18.27■□□□□ 0.52
SSX2IP-202ENST00000422026 SEPT12Q8IYM1 358 aa18.27■□□□□ 0.52
SSX2IP-202ENST00000422026 SMARCC1Q92922 1105 aaPredicted RBP18.27■□□□□ 0.52
SSX2IP-202ENST00000422026 DDX21Q9NR30 783 aaKnown RBP eCLIP18.27■□□□□ 0.52
SSX2IP-202ENST00000422026 CHPF2Q9P2E5 772 aa18.27■□□□□ 0.52
SSX2IP-202ENST00000422026 COG6Q9Y2V7 657 aa18.27■□□□□ 0.52
SSX2IP-202ENST00000422026 PXDNLA1KZ92 1463 aa18.26■□□□□ 0.51
SSX2IP-202ENST00000422026 RLBP1P12271 317 aa18.26■□□□□ 0.51
SSX2IP-202ENST00000422026 ITPRIPQ8IWB1 547 aa18.26■□□□□ 0.51
SSX2IP-202ENST00000422026 NECTIN2Q92692 538 aa18.26■□□□□ 0.51
SSX2IP-202ENST00000422026 ATG3Q9NT62 314 aa18.26■□□□□ 0.51
SSX2IP-202ENST00000422026 FKBP5Q13451 457 aaPredicted RBP18.25■□□□□ 0.51
SSX2IP-202ENST00000422026 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
SSX2IP-202ENST00000422026 RGS12O14924 1447 aa18.24■□□□□ 0.51
SSX2IP-202ENST00000422026 DDX58O95786 925 aaKnown RBP18.24■□□□□ 0.51
SSX2IP-202ENST00000422026 CCT4P50991 539 aaKnown RBP18.24■□□□□ 0.51
SSX2IP-202ENST00000422026 TMEM57Q8N5G2 664 aa18.24■□□□□ 0.51
SSX2IP-202ENST00000422026 ASAP1Q9ULH1 1129 aa18.24■□□□□ 0.51
SSX2IP-202ENST00000422026 NHSQ6T4R5 1651 aa18.24■□□□□ 0.51
SSX2IP-202ENST00000422026 PTCD1O75127 700 aaKnown RBP18.23■□□□□ 0.51
SSX2IP-202ENST00000422026 INTS3Q68E01 1043 aaKnown RBP18.23■□□□□ 0.51
SSX2IP-202ENST00000422026 CICQ96RK0 1608 aaPredicted RBP18.23■□□□□ 0.51
SSX2IP-202ENST00000422026 PRAMEF22A3QJZ6 481 aa18.22■□□□□ 0.51
SSX2IP-202ENST00000422026 STARD3NLO95772 234 aa18.22■□□□□ 0.51
SSX2IP-202ENST00000422026 G2E3Q7L622 706 aa18.22■□□□□ 0.51
SSX2IP-202ENST00000422026 ACSBG1Q96GR2 724 aa18.22■□□□□ 0.51
SSX2IP-202ENST00000422026 TNNQ9UQP3 1299 aa18.22■□□□□ 0.51
SSX2IP-202ENST00000422026 USP16Q9Y5T5 823 aa18.22■□□□□ 0.51
SSX2IP-202ENST00000422026 RBM42Q9BTD8 480 aaKnown RBP18.21■□□□□ 0.51
SSX2IP-202ENST00000422026 N4BP2Q86UW6 1770 aaPredicted RBP18.2■□□□□ 0.5
SSX2IP-202ENST00000422026 ZNF831Q5JPB2 1677 aa18.2■□□□□ 0.5
SSX2IP-202ENST00000422026 KRT27Q7Z3Y8 459 aa18.2■□□□□ 0.5
SSX2IP-202ENST00000422026 PALLDQ8WX93 1383 aa18.19■□□□□ 0.5
SSX2IP-202ENST00000422026 RXRBP28702 533 aa18.19■□□□□ 0.5
SSX2IP-202ENST00000422026 PDIA6Q15084 440 aa18.19■□□□□ 0.5
SSX2IP-202ENST00000422026 FAM196AQ6ZSG2 479 aa18.19■□□□□ 0.5
SSX2IP-202ENST00000422026 PHAXQ9H814 394 aaKnown RBP18.19■□□□□ 0.5
SSX2IP-202ENST00000422026 ATP10DQ9P241 1426 aa18.18■□□□□ 0.5
SSX2IP-202ENST00000422026 B4GALNT3Q6L9W6 998 aa18.17■□□□□ 0.5
SSX2IP-202ENST00000422026 SLC4A10Q6U841 1118 aa18.17■□□□□ 0.5
SSX2IP-202ENST00000422026 KSR2Q6VAB6 950 aa18.17■□□□□ 0.5
SSX2IP-202ENST00000422026 DNAAF4Q8WXU2 420 aa18.17■□□□□ 0.5
SSX2IP-202ENST00000422026 TJP1Q07157 1748 aa18.16■□□□□ 0.5
SSX2IP-202ENST00000422026 HMGB2P26583 209 aaKnown RBP18.16■□□□□ 0.5
SSX2IP-202ENST00000422026 PROSER3Q2NL68 480 aa18.16■□□□□ 0.5
SSX2IP-202ENST00000422026 DNAJC10Q8IXB1 793 aa18.16■□□□□ 0.5
SSX2IP-202ENST00000422026 ZBTB40Q9NUA8 1239 aa18.16■□□□□ 0.5
SSX2IP-202ENST00000422026 IBTKQ9P2D0 1353 aaPredicted RBP18.16■□□□□ 0.5
SSX2IP-202ENST00000422026 KAT6BQ8WYB5 2073 aa18.15■□□□□ 0.5
SSX2IP-202ENST00000422026 LOC102724428A0A0B4J2F2 783 aa18.15■□□□□ 0.5
SSX2IP-202ENST00000422026 ZBTB7BO15156 539 aaPredicted RBP18.15■□□□□ 0.5
SSX2IP-202ENST00000422026 KCNQ2O43526 872 aa18.15■□□□□ 0.5
SSX2IP-202ENST00000422026 ANXA1P04083 346 aa18.15■□□□□ 0.5
SSX2IP-202ENST00000422026 MYL6BP14649 208 aa18.15■□□□□ 0.5
SSX2IP-202ENST00000422026 SIK1P57059 783 aa18.15■□□□□ 0.5
SSX2IP-202ENST00000422026 PELP1Q8IZL8 1130 aaKnown RBP18.15■□□□□ 0.5
SSX2IP-202ENST00000422026 PI4KAP2A4QPH2 592 aa18.14■□□□□ 0.49
SSX2IP-202ENST00000422026 F6X3S4 739 aa18.14■□□□□ 0.49
SSX2IP-202ENST00000422026 LRP10Q7Z4F1 713 aa18.14■□□□□ 0.49
SSX2IP-202ENST00000422026 PI4KAP1Q8N8J0 262 aa18.14■□□□□ 0.49
SSX2IP-202ENST00000422026 XAGE3Q8WTP9 111 aa18.14■□□□□ 0.49
SSX2IP-202ENST00000422026 SRCIN1Q9C0H9 1055 aa18.14■□□□□ 0.49
SSX2IP-202ENST00000422026 BCL11BQ9C0K0 894 aaPredicted RBP18.14■□□□□ 0.49
SSX2IP-202ENST00000422026 ADCY9O60503 1353 aa18.14■□□□□ 0.49
SSX2IP-202ENST00000422026 BTAF1O14981 1849 aa18.14■□□□□ 0.49
SSX2IP-202ENST00000422026 SBF2Q86WG5 1849 aa18.14■□□□□ 0.49
SSX2IP-202ENST00000422026 ALDH1L1O75891 902 aa18.13■□□□□ 0.49
SSX2IP-202ENST00000422026 CYP19A1P11511 503 aaPredicted RBP18.13■□□□□ 0.49
SSX2IP-202ENST00000422026 ATP6V1AP38606 617 aa18.13■□□□□ 0.49
SSX2IP-202ENST00000422026 NEXNQ0ZGT2 675 aa18.13■□□□□ 0.49
SSX2IP-202ENST00000422026 CENPQQ7L2Z9 268 aaPredicted RBP18.13■□□□□ 0.49
SSX2IP-202ENST00000422026 COPS6Q7L5N1 327 aa18.13■□□□□ 0.49
SSX2IP-202ENST00000422026 RIC3Q7Z5B4 369 aa18.13■□□□□ 0.49
SSX2IP-202ENST00000422026 HDAC5Q9UQL6 1122 aa18.13■□□□□ 0.49
SSX2IP-202ENST00000422026 BRWD3Q6RI45 1802 aa18.13■□□□□ 0.49
SSX2IP-202ENST00000422026 NBPF26B4DH59 902 aa18.12■□□□□ 0.49
SSX2IP-202ENST00000422026 A1BGP04217 495 aa18.12■□□□□ 0.49
SSX2IP-202ENST00000422026 GNAI3P08754 354 aa18.12■□□□□ 0.49
SSX2IP-202ENST00000422026 ADRA2BP18089 450 aa18.12■□□□□ 0.49
SSX2IP-202ENST00000422026 NBPF14Q5TI25 921 aa18.12■□□□□ 0.49
SSX2IP-202ENST00000422026 NBPF10Q6P3W6 841 aaKnown RBP18.12■□□□□ 0.49
SSX2IP-202ENST00000422026 ANKRD13DQ6ZTN6 518 aa18.12■□□□□ 0.49
SSX2IP-202ENST00000422026 NPM2Q86SE8 214 aaKnown RBP18.12■□□□□ 0.49
SSX2IP-202ENST00000422026 NBPF15Q8N660 670 aa18.12■□□□□ 0.49
SSX2IP-202ENST00000422026 PLBD2Q8NHP8 589 aa18.12■□□□□ 0.49
SSX2IP-202ENST00000422026 MAP3K2Q9Y2U5 619 aa18.12■□□□□ 0.49
SSX2IP-202ENST00000422026 AIMP1Q12904 312 aaKnown RBP18.11■□□□□ 0.49
SSX2IP-202ENST00000422026 SLC4A9Q96Q91 983 aa18.11■□□□□ 0.49
SSX2IP-202ENST00000422026 RWDD1Q9H446 243 aaPredicted RBP18.11■□□□□ 0.49
SSX2IP-202ENST00000422026 RREB1Q92766 1687 aa18.1■□□□□ 0.49
SSX2IP-202ENST00000422026 IL6STP40189 918 aaPredicted RBP18.1■□□□□ 0.49
SSX2IP-202ENST00000422026 BEND3Q5T5X7 828 aa18.1■□□□□ 0.49
SSX2IP-202ENST00000422026 LINS1Q8NG48 757 aa18.1■□□□□ 0.49
SSX2IP-202ENST00000422026 KIF6Q6ZMV9 814 aa18.09■□□□□ 0.49
SSX2IP-202ENST00000422026 METTL22Q9BUU2 404 aaPredicted RBP18.09■□□□□ 0.49
SSX2IP-202ENST00000422026 CCDC87Q9NVE4 849 aa18.09■□□□□ 0.49
SSX2IP-202ENST00000422026 HDAC1Q13547 482 aaPredicted RBP18.08■□□□□ 0.48
SSX2IP-202ENST00000422026 FAM182BQ5T319 152 aa18.08■□□□□ 0.48
SSX2IP-202ENST00000422026 RGS17Q9UGC6 210 aaPredicted RBP18.08■□□□□ 0.48
SSX2IP-202ENST00000422026 LY75O60449 1722 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms