RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 MRPL12P52815 198 aaKnown RBP12.99□□□□□ -0.33
FN1-207ENST00000421182 JAKMIP3Q5VZ66 844 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 DUSP27Q5VZP5 1158 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 PAXIP1Q6ZW49 1069 aaPredicted RBP12.99□□□□□ -0.33
FN1-207ENST00000421182 VPS36Q86VN1 386 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 CCDC178Q5BJE1 867 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 C16orf71Q8IYS4 520 aaPredicted RBP12.99□□□□□ -0.33
FN1-207ENST00000421182 TSG101Q99816 390 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 SCLT1Q96NL6 688 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 CCDC181Q5TID7 509 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 BRPF1P55201 1214 aaPredicted RBP12.99□□□□□ -0.33
FN1-207ENST00000421182 CAVIN1Q6NZI2 390 aaKnown RBP12.99□□□□□ -0.33
FN1-207ENST00000421182 TRMT112Q9UI30 125 aaKnown RBP12.99□□□□□ -0.33
FN1-207ENST00000421182 STXBP4Q6ZWJ1 553 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 ARID3AQ99856 593 aa12.99□□□□□ -0.33
FN1-207ENST00000421182 PDE4BQ07343 736 aa12.98□□□□□ -0.33
FN1-207ENST00000421182 CATIPQ7Z7H3 387 aa12.98□□□□□ -0.33
FN1-207ENST00000421182 NYXQ9GZU5 481 aa12.98□□□□□ -0.33
FN1-207ENST00000421182 ABCC5O15440 1437 aa12.98□□□□□ -0.33
FN1-207ENST00000421182 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
FN1-207ENST00000421182 BAG4O95429 457 aaKnown RBP12.98□□□□□ -0.33
FN1-207ENST00000421182 PLCH2O75038 1416 aa12.98□□□□□ -0.33
FN1-207ENST00000421182 CETN1Q12798 172 aa12.98□□□□□ -0.33
FN1-207ENST00000421182 PDRG1Q9NUG6 133 aa12.98□□□□□ -0.33
FN1-207ENST00000421182 MRE11P49959 708 aa12.98□□□□□ -0.33
FN1-207ENST00000421182 RALGAPBQ86X10 1494 aa12.98□□□□□ -0.33
FN1-207ENST00000421182 GCC2Q8IWJ2 1684 aa12.97□□□□□ -0.33
FN1-207ENST00000421182 CEBPAP49715 358 aaPredicted RBP12.97□□□□□ -0.33
FN1-207ENST00000421182 FEZ1Q99689 392 aa12.97□□□□□ -0.33
FN1-207ENST00000421182 CWC25Q9NXE8 425 aaPredicted RBP12.97□□□□□ -0.33
FN1-207ENST00000421182 FBXO3Q9UK99 471 aa12.97□□□□□ -0.33
FN1-207ENST00000421182 NAIPQ13075 1403 aa12.97□□□□□ -0.33
FN1-207ENST00000421182 CCDC152Q4G0S7 254 aa12.97□□□□□ -0.33
FN1-207ENST00000421182 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
FN1-207ENST00000421182 CABP5Q9NP86 173 aa12.97□□□□□ -0.33
FN1-207ENST00000421182 HDAC9Q9UKV0 1011 aa12.97□□□□□ -0.33
FN1-207ENST00000421182 SSBP05455 408 aaKnown RBP eCLIP12.97□□□□□ -0.33
FN1-207ENST00000421182 FOXO3O43524 673 aa12.96□□□□□ -0.33
FN1-207ENST00000421182 BCL11BQ9C0K0 894 aaPredicted RBP12.96□□□□□ -0.33
FN1-207ENST00000421182 C1orf115Q9H7X2 142 aa12.96□□□□□ -0.33
FN1-207ENST00000421182 CWC27Q6UX04 472 aaKnown RBP12.96□□□□□ -0.34
FN1-207ENST00000421182 OGFOD1Q8N543 542 aa12.96□□□□□ -0.34
FN1-207ENST00000421182 ATP10BO94823 1461 aa12.96□□□□□ -0.34
FN1-207ENST00000421182 ZNF771Q7L3S4 317 aaPredicted RBP12.96□□□□□ -0.34
FN1-207ENST00000421182 CCDC96Q2M329 555 aa12.95□□□□□ -0.34
FN1-207ENST00000421182 SHROOM2Q13796 1616 aa12.95□□□□□ -0.34
FN1-207ENST00000421182 NF2P35240 595 aa12.95□□□□□ -0.34
FN1-207ENST00000421182 PDZRN3Q9UPQ7 1066 aa12.95□□□□□ -0.34
FN1-207ENST00000421182 K7ELQ4 463 aaPredicted RBP12.95□□□□□ -0.34
FN1-207ENST00000421182 FIBPO43427 364 aa12.95□□□□□ -0.34
FN1-207ENST00000421182 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
FN1-207ENST00000421182 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
FN1-207ENST00000421182 SH2B1Q9NRF2 756 aaPredicted RBP12.95□□□□□ -0.34
FN1-207ENST00000421182 HMGN5P82970 282 aaKnown RBP12.95□□□□□ -0.34
FN1-207ENST00000421182 C6orf229H3BNL8 230 aa12.95□□□□□ -0.34
FN1-207ENST00000421182 POLD1P28340 1107 aa12.95□□□□□ -0.34
FN1-207ENST00000421182 SPATA32Q96LK8 384 aa12.95□□□□□ -0.34
FN1-207ENST00000421182 CEP170Q5SW79 1584 aa12.95□□□□□ -0.34
FN1-207ENST00000421182 MINDY4BA8MYZ0 360 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 PATL2C9JE40 543 aaKnown RBP12.94□□□□□ -0.34
FN1-207ENST00000421182 PIK3R4Q99570 1358 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 ZNF213O14771 459 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 AMPD3Q01432 767 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 WAPLQ7Z5K2 1190 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 LRRC27Q9C0I9 530 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 ANKRD36BQ8N2N9 1353 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 GOLGA6L7A0A1B0GV03 622 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 JAKMIP1Q96N16 626 aaKnown RBP12.94□□□□□ -0.34
FN1-207ENST00000421182 FERMT1Q9BQL6 677 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 FAM43AQ8N2R8 423 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 SETDB2Q96T68 719 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 MYD88Q99836 296 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 ZCCHC11Q5TAX3 1644 aaKnown RBP12.94□□□□□ -0.34
FN1-207ENST00000421182 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
FN1-207ENST00000421182 SLC12A7Q9Y666 1083 aa12.94□□□□□ -0.34
FN1-207ENST00000421182 KDM5AP29375 1690 aaKnown RBP12.94□□□□□ -0.34
FN1-207ENST00000421182 TRPM2O94759 1503 aa12.93□□□□□ -0.34
FN1-207ENST00000421182 CEBPZQ03701 1054 aaKnown RBP12.93□□□□□ -0.34
FN1-207ENST00000421182 MAP7D2Q96T17 732 aa12.93□□□□□ -0.34
FN1-207ENST00000421182 SNRPA1P09661 255 aaKnown RBP12.93□□□□□ -0.34
FN1-207ENST00000421182 STK11IPQ8N1F8 1099 aa12.93□□□□□ -0.34
FN1-207ENST00000421182 FKBP15Q5T1M5 1219 aa12.93□□□□□ -0.34
FN1-207ENST00000421182 ANAPC15P60006 121 aa12.93□□□□□ -0.34
FN1-207ENST00000421182 WDR78Q5VTH9 848 aa12.93□□□□□ -0.34
FN1-207ENST00000421182 TSHZ2Q9NRE2 1034 aa12.93□□□□□ -0.34
FN1-207ENST00000421182 SEPT11Q9NVA2 429 aaKnown RBP12.93□□□□□ -0.34
FN1-207ENST00000421182 MAST1Q9Y2H9 1570 aa12.93□□□□□ -0.34
FN1-207ENST00000421182 GPATCH8Q9UKJ3 1502 aaKnown RBP12.92□□□□□ -0.34
FN1-207ENST00000421182 STK3Q13188 491 aa12.92□□□□□ -0.34
FN1-207ENST00000421182 KDM4AO75164 1064 aa12.92□□□□□ -0.34
FN1-207ENST00000421182 BCAR3O75815 825 aa12.92□□□□□ -0.34
FN1-207ENST00000421182 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
FN1-207ENST00000421182 IDI1Q13907 227 aa12.92□□□□□ -0.34
FN1-207ENST00000421182 NBPF6Q5VWK0 638 aa12.92□□□□□ -0.34
FN1-207ENST00000421182 NBPF5PQ86XG9 351 aaPredicted RBP12.92□□□□□ -0.34
FN1-207ENST00000421182 NBPF4Q96M43 638 aa12.92□□□□□ -0.34
FN1-207ENST00000421182 C8orf37Q96NL8 207 aa12.92□□□□□ -0.34
FN1-207ENST00000421182 ASXL1Q8IXJ9 1541 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms