RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 NIFKQ9BYG3 293 aaKnown RBP7.38□□□□□ -1.23
SDCBPP3-201ENST00000419629 NEURL1BA8MQ27 555 aa7.37□□□□□ -1.23
SDCBPP3-201ENST00000419629 GNB5O14775 395 aa7.37□□□□□ -1.23
SDCBPP3-201ENST00000419629 DGKGP49619 791 aa7.37□□□□□ -1.23
SDCBPP3-201ENST00000419629 GRIN2CQ14957 1233 aa7.37□□□□□ -1.23
SDCBPP3-201ENST00000419629 AIDAQ96BJ3 306 aa7.37□□□□□ -1.23
SDCBPP3-201ENST00000419629 KLF15Q9UIH9 416 aa7.37□□□□□ -1.23
SDCBPP3-201ENST00000419629 ATXN7O15265 892 aaPredicted RBP7.36□□□□□ -1.23
SDCBPP3-201ENST00000419629 FURINP09958 794 aa7.36□□□□□ -1.23
SDCBPP3-201ENST00000419629 TNP2Q05952 138 aa7.36□□□□□ -1.23
SDCBPP3-201ENST00000419629 MAP7D1Q3KQU3 841 aa7.36□□□□□ -1.23
SDCBPP3-201ENST00000419629 PLPP7Q8NBV4 271 aa7.36□□□□□ -1.23
SDCBPP3-201ENST00000419629 SLC4A9Q96Q91 983 aa7.36□□□□□ -1.23
SDCBPP3-201ENST00000419629 GDPD2Q9HCC8 539 aa7.36□□□□□ -1.23
SDCBPP3-201ENST00000419629 IQSEC3Q9UPP2 1182 aaPredicted RBP7.36□□□□□ -1.23
SDCBPP3-201ENST00000419629 A0A1W2PNR3 127 aa7.35□□□□□ -1.23
SDCBPP3-201ENST00000419629 TMEM229AB2RXF0 380 aa7.35□□□□□ -1.23
SDCBPP3-201ENST00000419629 CDK2AP1O14519 115 aa7.35□□□□□ -1.23
SDCBPP3-201ENST00000419629 MAPTP10636 758 aaKnown RBP7.35□□□□□ -1.23
SDCBPP3-201ENST00000419629 FAM182BQ5T319 152 aa7.35□□□□□ -1.23
SDCBPP3-201ENST00000419629 C1QTNF9BB2RNN3 333 aa7.34□□□□□ -1.23
SDCBPP3-201ENST00000419629 PIK3R2O00459 728 aa7.34□□□□□ -1.23
SDCBPP3-201ENST00000419629 MTFR1Q15390 333 aa7.34□□□□□ -1.23
SDCBPP3-201ENST00000419629 ARSJQ5FYB0 599 aaPredicted RBP7.34□□□□□ -1.23
SDCBPP3-201ENST00000419629 CD163Q86VB7 1156 aa7.34□□□□□ -1.23
SDCBPP3-201ENST00000419629 SERTAD1Q9UHV2 236 aa7.34□□□□□ -1.23
SDCBPP3-201ENST00000419629 DCDC2BA2VCK2 349 aa7.33□□□□□ -1.24
SDCBPP3-201ENST00000419629 PRKCSHP14314 528 aaPredicted RBP7.33□□□□□ -1.24
SDCBPP3-201ENST00000419629 CD33P20138 364 aa7.33□□□□□ -1.24
SDCBPP3-201ENST00000419629 ADH6P28332 368 aa7.33□□□□□ -1.24
SDCBPP3-201ENST00000419629 CHSY3Q70JA7 882 aa7.33□□□□□ -1.24
SDCBPP3-201ENST00000419629 ZIC5Q96T25 663 aa7.33□□□□□ -1.24
SDCBPP3-201ENST00000419629 AVENQ9NQS1 362 aaPredicted RBP7.33□□□□□ -1.24
SDCBPP3-201ENST00000419629 USP3Q9Y6I4 520 aa7.33□□□□□ -1.24
SDCBPP3-201ENST00000419629 A6NJY4 79 aa7.32□□□□□ -1.24
SDCBPP3-201ENST00000419629 ABL2P42684 1182 aa7.32□□□□□ -1.24
SDCBPP3-201ENST00000419629 WASHC4Q2M389 1173 aa7.32□□□□□ -1.24
SDCBPP3-201ENST00000419629 NBPF1Q3BBV0 1214 aa7.32□□□□□ -1.24
SDCBPP3-201ENST00000419629 FCHSD1Q86WN1 690 aa7.32□□□□□ -1.24
SDCBPP3-201ENST00000419629 ZDHHC3Q9NYG2 299 aa7.32□□□□□ -1.24
SDCBPP3-201ENST00000419629 PCDHGA11Q9Y5H2 935 aa7.32□□□□□ -1.24
SDCBPP3-201ENST00000419629 KHNYNO15037 678 aaKnown RBP7.31□□□□□ -1.24
SDCBPP3-201ENST00000419629 CHRNA4P43681 627 aa7.31□□□□□ -1.24
SDCBPP3-201ENST00000419629 NOP53Q9NZM5 478 aaKnown RBP7.31□□□□□ -1.24
SDCBPP3-201ENST00000419629 FAM157BP0CG42 384 aa7.3□□□□□ -1.24
SDCBPP3-201ENST00000419629 TATP17735 454 aaPredicted RBP7.3□□□□□ -1.24
SDCBPP3-201ENST00000419629 PCBP4P57723 403 aaKnown RBP7.3□□□□□ -1.24
SDCBPP3-201ENST00000419629 SEMA3FQ13275 785 aa7.3□□□□□ -1.24
SDCBPP3-201ENST00000419629 SAMD5Q5TGI4 173 aa7.3□□□□□ -1.24
SDCBPP3-201ENST00000419629 STRN4Q9NRL3 753 aa7.3□□□□□ -1.24
SDCBPP3-201ENST00000419629 PIK3CDO00329 1044 aa7.29□□□□□ -1.24
SDCBPP3-201ENST00000419629 EFSO43281 561 aa7.29□□□□□ -1.24
SDCBPP3-201ENST00000419629 SOX11P35716 441 aa7.29□□□□□ -1.24
SDCBPP3-201ENST00000419629 ZNF468Q5VIY5 522 aaPredicted RBP7.29□□□□□ -1.24
SDCBPP3-201ENST00000419629 Q8N3U1 123 aa7.29□□□□□ -1.24
SDCBPP3-201ENST00000419629 CABP1Q9NZU7 370 aa7.29□□□□□ -1.24
SDCBPP3-201ENST00000419629 TRIM11Q96F44 468 aa7.28□□□□□ -1.24
SDCBPP3-201ENST00000419629 PARP3Q9Y6F1 533 aa7.28□□□□□ -1.24
SDCBPP3-201ENST00000419629 ITGB7P26010 798 aa7.27□□□□□ -1.25
SDCBPP3-201ENST00000419629 LAMC2Q13753 1193 aa7.27□□□□□ -1.25
SDCBPP3-201ENST00000419629 MARK1Q9P0L2 795 aa7.27□□□□□ -1.25
SDCBPP3-201ENST00000419629 SCHIP1Q9P0W5 487 aaPredicted RBP7.27□□□□□ -1.25
SDCBPP3-201ENST00000419629 PRR12Q9ULL5 1215 aa7.27□□□□□ -1.25
SDCBPP3-201ENST00000419629 TXLNAP40222 546 aa7.26□□□□□ -1.25
SDCBPP3-201ENST00000419629 ZDHHC1Q8WTX9 485 aa7.26□□□□□ -1.25
SDCBPP3-201ENST00000419629 C7orf43Q8WVR3 580 aa7.26□□□□□ -1.25
SDCBPP3-201ENST00000419629 MDFIQ99750 246 aa7.26□□□□□ -1.25
SDCBPP3-201ENST00000419629 PLVAPQ9BX97 442 aa7.26□□□□□ -1.25
SDCBPP3-201ENST00000419629 GJA3Q9Y6H8 435 aa7.26□□□□□ -1.25
SDCBPP3-201ENST00000419629 BACH1O14867 736 aa7.25□□□□□ -1.25
SDCBPP3-201ENST00000419629 MCM6Q14566 821 aa7.25□□□□□ -1.25
SDCBPP3-201ENST00000419629 BICDL1Q6ZP65 573 aa7.25□□□□□ -1.25
SDCBPP3-201ENST00000419629 ELOA3CA0A087WX78 387 aaPredicted RBP7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 ELOA3DA6NLF2 546 aaPredicted RBP7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 EPHA4P54764 986 aa7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 DOC2BQ14184 412 aa7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 TEAD4Q15561 434 aa7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 EML3Q32P44 896 aa7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 ELOA3BQ3SY89 546 aa7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 ELOA3Q8NG57 546 aa7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 L3MBTL2Q969R5 705 aa7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 ALG2Q9H553 416 aa7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 ZNF358Q9NW07 568 aa7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 NOD1Q9Y239 953 aa7.24□□□□□ -1.25
SDCBPP3-201ENST00000419629 EML1O00423 815 aa7.23□□□□□ -1.25
SDCBPP3-201ENST00000419629 LZTS3O60299 673 aaPredicted RBP7.23□□□□□ -1.25
SDCBPP3-201ENST00000419629 SKIP12755 728 aa7.23□□□□□ -1.25
SDCBPP3-201ENST00000419629 NOS2P35228 1153 aa7.23□□□□□ -1.25
SDCBPP3-201ENST00000419629 GTF2IP78347 998 aa7.23□□□□□ -1.25
SDCBPP3-201ENST00000419629 SYT9Q86SS6 491 aa7.23□□□□□ -1.25
SDCBPP3-201ENST00000419629 NFATC2IPQ8NCF5 419 aa7.23□□□□□ -1.25
SDCBPP3-201ENST00000419629 COG6Q9Y2V7 657 aa7.23□□□□□ -1.25
SDCBPP3-201ENST00000419629 SPATA31C1P0DKV0 1188 aa7.22□□□□□ -1.25
SDCBPP3-201ENST00000419629 LRRC69Q6ZNQ3 347 aa7.22□□□□□ -1.25
SDCBPP3-201ENST00000419629 SEMA6BQ9H3T3 888 aa7.22□□□□□ -1.25
SDCBPP3-201ENST00000419629 ADARB2-AS1A8MUL3 147 aa7.21□□□□□ -1.26
SDCBPP3-201ENST00000419629 SIN3BO75182 1162 aa7.21□□□□□ -1.26
SDCBPP3-201ENST00000419629 ALAS2P22557 587 aa7.21□□□□□ -1.26
SDCBPP3-201ENST00000419629 GATA4P43694 442 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms