RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 NPR3P17342 541 aa8.75□□□□□ -1.01
RFC4-204ENST00000417876 PSMA6P60900 246 aaKnown RBP8.75□□□□□ -1.01
RFC4-204ENST00000417876 SF3B2Q13435 895 aaKnown RBP8.75□□□□□ -1.01
RFC4-204ENST00000417876 FAM26DQ5JW98 314 aa8.75□□□□□ -1.01
RFC4-204ENST00000417876 MEIOBQ8N635 442 aa8.75□□□□□ -1.01
RFC4-204ENST00000417876 PARP3Q9Y6F1 533 aa8.75□□□□□ -1.01
RFC4-204ENST00000417876 TNFRSF10BO14763 440 aa8.74□□□□□ -1.01
RFC4-204ENST00000417876 TEAD4Q15561 434 aa8.74□□□□□ -1.01
RFC4-204ENST00000417876 C16orf46Q6P387 395 aa8.74□□□□□ -1.01
RFC4-204ENST00000417876 PPARGC1BQ86YN6 1023 aaKnown RBP8.74□□□□□ -1.01
RFC4-204ENST00000417876 NOS2P35228 1153 aa8.73□□□□□ -1.01
RFC4-204ENST00000417876 RBM25P49756 843 aaKnown RBP8.73□□□□□ -1.01
RFC4-204ENST00000417876 VTI1AQ96AJ9 217 aa8.73□□□□□ -1.01
RFC4-204ENST00000417876 NLRP3Q96P20 1036 aa8.73□□□□□ -1.01
RFC4-204ENST00000417876 HCN4Q9Y3Q4 1203 aa8.73□□□□□ -1.01
RFC4-204ENST00000417876 MPSTP25325 297 aa8.72□□□□□ -1.01
RFC4-204ENST00000417876 L3MBTL2Q969R5 705 aa8.72□□□□□ -1.01
RFC4-204ENST00000417876 INSM2Q96T92 566 aaPredicted RBP8.72□□□□□ -1.01
RFC4-204ENST00000417876 GRIP2Q9C0E4 1043 aa8.72□□□□□ -1.01
RFC4-204ENST00000417876 CABP1Q9NZU7 370 aa8.72□□□□□ -1.01
RFC4-204ENST00000417876 AMOTL2Q9Y2J4 779 aa8.72□□□□□ -1.01
RFC4-204ENST00000417876 SERTM1A2A2V5 107 aa8.71□□□□□ -1.02
RFC4-204ENST00000417876 NGLY1Q96IV0 654 aa8.71□□□□□ -1.02
RFC4-204ENST00000417876 ZSCAN10Q96SZ4 725 aaPredicted RBP8.71□□□□□ -1.02
RFC4-204ENST00000417876 ANKRD33BA6NCL7 494 aa8.7□□□□□ -1.02
RFC4-204ENST00000417876 ZBTB39O15060 712 aa8.7□□□□□ -1.02
RFC4-204ENST00000417876 HIRAP54198 1017 aaPredicted RBP8.7□□□□□ -1.02
RFC4-204ENST00000417876 NPAS4Q8IUM7 802 aa8.7□□□□□ -1.02
RFC4-204ENST00000417876 ALDH16A1Q8IZ83 802 aa8.7□□□□□ -1.02
RFC4-204ENST00000417876 MYO19Q96H55 970 aa8.7□□□□□ -1.02
RFC4-204ENST00000417876 UNCXA6NJT0 531 aa8.69□□□□□ -1.02
RFC4-204ENST00000417876 SPINT1O43278 529 aa8.69□□□□□ -1.02
RFC4-204ENST00000417876 FAM13AO94988 1023 aa8.69□□□□□ -1.02
RFC4-204ENST00000417876 TXLNAP40222 546 aa8.69□□□□□ -1.02
RFC4-204ENST00000417876 CTSOP43234 321 aaPredicted RBP8.69□□□□□ -1.02
RFC4-204ENST00000417876 RNF144AP50876 292 aaPredicted RBP8.69□□□□□ -1.02
RFC4-204ENST00000417876 KLRG1Q96E93 195 aa8.69□□□□□ -1.02
RFC4-204ENST00000417876 TSEN34Q9BSV6 310 aaKnown RBP8.69□□□□□ -1.02
RFC4-204ENST00000417876 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.69□□□□□ -1.02
RFC4-204ENST00000417876 ZNF232Q9UNY5 417 aa8.69□□□□□ -1.02
RFC4-204ENST00000417876 CAPN5O15484 640 aaPredicted RBP8.68□□□□□ -1.02
RFC4-204ENST00000417876 MAPK1P28482 360 aa8.68□□□□□ -1.02
RFC4-204ENST00000417876 RANGAP1P46060 587 aaPredicted RBP8.68□□□□□ -1.02
RFC4-204ENST00000417876 C4orf17Q53FE4 359 aa8.68□□□□□ -1.02
RFC4-204ENST00000417876 TMEM214Q6NUQ4 689 aaKnown RBP8.68□□□□□ -1.02
RFC4-204ENST00000417876 Q6ZNB5 142 aa8.68□□□□□ -1.02
RFC4-204ENST00000417876 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
RFC4-204ENST00000417876 NBPF15Q8N660 670 aa8.68□□□□□ -1.02
RFC4-204ENST00000417876 RHBDD1Q8TEB9 315 aa8.68□□□□□ -1.02
RFC4-204ENST00000417876 C7orf43Q8WVR3 580 aa8.68□□□□□ -1.02
RFC4-204ENST00000417876 STIM2Q9P246 746 aa8.68□□□□□ -1.02
RFC4-204ENST00000417876 DCTN4Q9UJW0 460 aa8.68□□□□□ -1.02
RFC4-204ENST00000417876 RBM47A0AV96 593 aaKnown RBP8.67□□□□□ -1.02
RFC4-204ENST00000417876 LCE2BO14633 110 aa8.67□□□□□ -1.02
RFC4-204ENST00000417876 FZD6O60353 706 aa8.67□□□□□ -1.02
RFC4-204ENST00000417876 GPC1P35052 558 aa8.67□□□□□ -1.02
RFC4-204ENST00000417876 EIF1AXP47813 144 aaKnown RBP8.67□□□□□ -1.02
RFC4-204ENST00000417876 NIFKQ9BYG3 293 aaKnown RBP8.67□□□□□ -1.02
RFC4-204ENST00000417876 PHACTR1Q9C0D0 580 aa8.67□□□□□ -1.02
RFC4-204ENST00000417876 CCDC87Q9NVE4 849 aa8.67□□□□□ -1.02
RFC4-204ENST00000417876 KLK14Q9P0G3 267 aa8.67□□□□□ -1.02
RFC4-204ENST00000417876 CHMP3Q9Y3E7 222 aa8.67□□□□□ -1.02
RFC4-204ENST00000417876 ERCC3P19447 782 aa8.66□□□□□ -1.02
RFC4-204ENST00000417876 SLC27A3Q5K4L6 730 aa8.66□□□□□ -1.02
RFC4-204ENST00000417876 ATCAYQ86WG3 371 aa8.66□□□□□ -1.02
RFC4-204ENST00000417876 ETFBKMTQ8IXQ9 262 aa8.66□□□□□ -1.02
RFC4-204ENST00000417876 ASB16Q96NS5 453 aa8.66□□□□□ -1.02
RFC4-204ENST00000417876 PDZRN3Q9UPQ7 1066 aa8.66□□□□□ -1.02
RFC4-204ENST00000417876 PHKA2P46019 1235 aa8.65□□□□□ -1.02
RFC4-204ENST00000417876 TAGLNQ01995 201 aaKnown RBP8.65□□□□□ -1.02
RFC4-204ENST00000417876 DGKZQ13574 1117 aa8.65□□□□□ -1.02
RFC4-204ENST00000417876 RTN1Q16799 776 aa8.65□□□□□ -1.02
RFC4-204ENST00000417876 POLMQ9NP87 494 aaPredicted RBP8.65□□□□□ -1.02
RFC4-204ENST00000417876 BCS1LQ9Y276 419 aa8.65□□□□□ -1.02
RFC4-204ENST00000417876 PLA2G4AP47712 749 aa8.64□□□□□ -1.03
RFC4-204ENST00000417876 POU4F2Q12837 409 aa8.64□□□□□ -1.03
RFC4-204ENST00000417876 C11orf91Q3C1V1 193 aa8.64□□□□□ -1.03
RFC4-204ENST00000417876 C6orf118Q5T5N4 469 aa8.64□□□□□ -1.03
RFC4-204ENST00000417876 SPATA31C2B4DYI2 1134 aa8.63□□□□□ -1.03
RFC4-204ENST00000417876 IGHA2P01877 340 aa8.63□□□□□ -1.03
RFC4-204ENST00000417876 ZNF16P17020 682 aaPredicted RBP8.63□□□□□ -1.03
RFC4-204ENST00000417876 BRD2P25440 801 aaKnown RBP8.63□□□□□ -1.03
RFC4-204ENST00000417876 C1orf53Q5VUE5 145 aa8.63□□□□□ -1.03
RFC4-204ENST00000417876 MRPL14Q6P1L8 145 aaKnown RBP8.63□□□□□ -1.03
RFC4-204ENST00000417876 TMC7Q7Z402 723 aa8.63□□□□□ -1.03
RFC4-204ENST00000417876 FBXO33Q7Z6M2 555 aa8.63□□□□□ -1.03
RFC4-204ENST00000417876 RNF217Q8TC41 542 aa8.63□□□□□ -1.03
RFC4-204ENST00000417876 RBCK1Q9BYM8 510 aa8.63□□□□□ -1.03
RFC4-204ENST00000417876 AVPP01185 164 aa8.62□□□□□ -1.03
RFC4-204ENST00000417876 BMP2P12643 396 aa8.62□□□□□ -1.03
RFC4-204ENST00000417876 GNASQ5JWF2 1037 aa8.62□□□□□ -1.03
RFC4-204ENST00000417876 PRICKLE2Q7Z3G6 844 aa8.62□□□□□ -1.03
RFC4-204ENST00000417876 BCL2L13Q9BXK5 485 aa8.62□□□□□ -1.03
RFC4-204ENST00000417876 FAM187AA6NFU0 413 aa8.61□□□□□ -1.03
RFC4-204ENST00000417876 BMP1P13497 986 aa8.61□□□□□ -1.03
RFC4-204ENST00000417876 TRIM46Q7Z4K8 759 aa8.61□□□□□ -1.03
RFC4-204ENST00000417876 RGL4Q8IZJ4 473 aa8.61□□□□□ -1.03
RFC4-204ENST00000417876 AIDAQ96BJ3 306 aa8.61□□□□□ -1.03
RFC4-204ENST00000417876 IFT43Q96FT9 208 aa8.61□□□□□ -1.03
RFC4-204ENST00000417876 UPP2O95045 317 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms