RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 HOXC9P31274 260 aa10.3□□□□□ -0.76
RBM39-209ENST00000416529 EVA1CP58658 441 aa10.3□□□□□ -0.76
RBM39-209ENST00000416529 ZC3H6P61129 1189 aaKnown RBP10.3□□□□□ -0.76
RBM39-209ENST00000416529 NUTM2GQ5VZR2 741 aa10.3□□□□□ -0.76
RBM39-209ENST00000416529 CABLES1Q8TDN4 633 aa10.3□□□□□ -0.76
RBM39-209ENST00000416529 FAM98CQ17RN3 349 aaKnown RBP10.29□□□□□ -0.76
RBM39-209ENST00000416529 CC2D1BQ5T0F9 858 aaKnown RBP10.29□□□□□ -0.76
RBM39-209ENST00000416529 BARGINQ6ZT62 677 aa10.29□□□□□ -0.76
RBM39-209ENST00000416529 ZFRQ96KR1 1074 aaKnown RBP10.29□□□□□ -0.76
RBM39-209ENST00000416529 CARD10Q9BWT7 1032 aa10.29□□□□□ -0.76
RBM39-209ENST00000416529 CRB1P82279 1406 aa10.29□□□□□ -0.76
RBM39-209ENST00000416529 COL5A2P05997 1499 aaPredicted RBP10.29□□□□□ -0.76
RBM39-209ENST00000416529 BCL9LQ86UU0 1499 aa10.29□□□□□ -0.76
RBM39-209ENST00000416529 PLCH1Q4KWH8 1693 aa10.28□□□□□ -0.76
RBM39-209ENST00000416529 ATRNO75882 1429 aa10.28□□□□□ -0.76
RBM39-209ENST00000416529 NCAPD2Q15021 1401 aa10.28□□□□□ -0.76
RBM39-209ENST00000416529 SOWAHBA6NEL2 793 aa10.28□□□□□ -0.76
RBM39-209ENST00000416529 RGS20O76081 388 aa10.28□□□□□ -0.76
RBM39-209ENST00000416529 PPP2R1AP30153 589 aa10.28□□□□□ -0.76
RBM39-209ENST00000416529 MTHFSP49914 203 aa10.28□□□□□ -0.76
RBM39-209ENST00000416529 BTG4Q9NY30 223 aa10.28□□□□□ -0.76
RBM39-209ENST00000416529 CAMTA1Q9Y6Y1 1673 aa10.28□□□□□ -0.76
RBM39-209ENST00000416529 SF3B2Q13435 895 aaKnown RBP10.27□□□□□ -0.77
RBM39-209ENST00000416529 SPATA31A5Q5VU36 1347 aa10.27□□□□□ -0.77
RBM39-209ENST00000416529 SPATA31A7Q8IWB4 1347 aa10.27□□□□□ -0.77
RBM39-209ENST00000416529 NRAPQ86VF7 1730 aa10.27□□□□□ -0.77
RBM39-209ENST00000416529 CCER2I3L3R5 266 aa10.26□□□□□ -0.77
RBM39-209ENST00000416529 DIAPH1O60610 1272 aaKnown RBP10.26□□□□□ -0.77
RBM39-209ENST00000416529 DEFB132Q7Z7B7 95 aa10.26□□□□□ -0.77
RBM39-209ENST00000416529 TCP11L2Q8N4U5 519 aa10.26□□□□□ -0.77
RBM39-209ENST00000416529 GJD4Q96KN9 370 aaPredicted RBP10.26□□□□□ -0.77
RBM39-209ENST00000416529 GRXCR2A6NFK2 248 aa10.25□□□□□ -0.77
RBM39-209ENST00000416529 CSB-PGBD3P0DP91 1061 aa10.25□□□□□ -0.77
RBM39-209ENST00000416529 HMGB2P26583 209 aaKnown RBP10.25□□□□□ -0.77
RBM39-209ENST00000416529 RRS1Q15050 365 aaKnown RBP10.25□□□□□ -0.77
RBM39-209ENST00000416529 ANKRD24Q8TF21 1146 aa10.25□□□□□ -0.77
RBM39-209ENST00000416529 EMILIN1Q9Y6C2 1016 aa10.25□□□□□ -0.77
RBM39-209ENST00000416529 SPATA31A1Q5TZJ5 1347 aa10.25□□□□□ -0.77
RBM39-209ENST00000416529 KDRP35968 1356 aa10.25□□□□□ -0.77
RBM39-209ENST00000416529 A0A0G2JS52 829 aa10.24□□□□□ -0.77
RBM39-209ENST00000416529 FCHSD2O94868 740 aa10.24□□□□□ -0.77
RBM39-209ENST00000416529 MYT1Q01538 1121 aa10.24□□□□□ -0.77
RBM39-209ENST00000416529 AMOTQ4VCS5 1084 aa10.24□□□□□ -0.77
RBM39-209ENST00000416529 HSP90AB2PQ58FF8 381 aa10.24□□□□□ -0.77
RBM39-209ENST00000416529 DIEXFQ68CQ4 756 aaKnown RBP10.24□□□□□ -0.77
RBM39-209ENST00000416529 TOM1L2Q6ZVM7 507 aa10.24□□□□□ -0.77
RBM39-209ENST00000416529 NGEFQ8N5V2 710 aa10.24□□□□□ -0.77
RBM39-209ENST00000416529 LRCH3Q96II8 777 aa10.24□□□□□ -0.77
RBM39-209ENST00000416529 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
RBM39-209ENST00000416529 IGSF1Q8N6C5 1336 aa10.24□□□□□ -0.77
RBM39-209ENST00000416529 NEFMP07197 916 aa10.23□□□□□ -0.77
RBM39-209ENST00000416529 IL13P35225 146 aa10.23□□□□□ -0.77
RBM39-209ENST00000416529 CHRNA2Q15822 529 aa10.23□□□□□ -0.77
RBM39-209ENST00000416529 TSR1Q2NL82 804 aaKnown RBP10.23□□□□□ -0.77
RBM39-209ENST00000416529 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.23□□□□□ -0.77
RBM39-209ENST00000416529 CCDC9Q9Y3X0 531 aaKnown RBP10.23□□□□□ -0.77
RBM39-209ENST00000416529 PEAK1Q9H792 1746 aa10.22□□□□□ -0.77
RBM39-209ENST00000416529 BCAMP50895 628 aa10.22□□□□□ -0.77
RBM39-209ENST00000416529 PRSS12P56730 875 aa10.22□□□□□ -0.77
RBM39-209ENST00000416529 EIF4A2Q14240 407 aaKnown RBP10.22□□□□□ -0.77
RBM39-209ENST00000416529 CCDC125Q86Z20 511 aa10.22□□□□□ -0.77
RBM39-209ENST00000416529 RAPGEF4Q8WZA2 1011 aa10.22□□□□□ -0.77
RBM39-209ENST00000416529 RBM27Q9P2N5 1060 aaKnown RBP10.22□□□□□ -0.77
RBM39-209ENST00000416529 BCL9O00512 1426 aa10.22□□□□□ -0.77
RBM39-209ENST00000416529 COL3A1P02461 1466 aaPredicted RBP10.22□□□□□ -0.77
RBM39-209ENST00000416529 NBPF26B4DH59 902 aa10.21□□□□□ -0.77
RBM39-209ENST00000416529 PPM1GO15355 546 aaPredicted RBP10.21□□□□□ -0.77
RBM39-209ENST00000416529 IL2RBP14784 551 aa10.21□□□□□ -0.77
RBM39-209ENST00000416529 TNNT2P45379 298 aaPredicted RBP10.21□□□□□ -0.77
RBM39-209ENST00000416529 ARHGEF1Q92888 912 aaKnown RBP10.21□□□□□ -0.77
RBM39-209ENST00000416529 CDCA7LQ96GN5 454 aa10.21□□□□□ -0.77
RBM39-209ENST00000416529 EYA1Q99502 592 aa10.21□□□□□ -0.77
RBM39-209ENST00000416529 NLRP2Q9NX02 1062 aa10.21□□□□□ -0.77
RBM39-209ENST00000416529 TSR3Q9UJK0 312 aaKnown RBP10.21□□□□□ -0.77
RBM39-209ENST00000416529 RGPD5Q99666 1765 aa10.21□□□□□ -0.78
RBM39-209ENST00000416529 DISP2A7MBM2 1401 aa10.2□□□□□ -0.78
RBM39-209ENST00000416529 ITGBL1O95965 494 aaPredicted RBP10.2□□□□□ -0.78
RBM39-209ENST00000416529 HSP90AB1P08238 724 aaKnown RBP10.2□□□□□ -0.78
RBM39-209ENST00000416529 TATP17735 454 aaPredicted RBP10.2□□□□□ -0.78
RBM39-209ENST00000416529 LARP1Q6PKG0 1096 aaKnown RBP10.2□□□□□ -0.78
RBM39-209ENST00000416529 EP400Q96L91 3159 aa10.2□□□□□ -0.78
RBM39-209ENST00000416529 TSKSQ9UJT2 592 aa10.2□□□□□ -0.78
RBM39-209ENST00000416529 KAT6BQ8WYB5 2073 aa10.19□□□□□ -0.78
RBM39-209ENST00000416529 RGPD1P0DJD0 1748 aa10.19□□□□□ -0.78
RBM39-209ENST00000416529 PARP4Q9UKK3 1724 aaKnown RBP10.19□□□□□ -0.78
RBM39-209ENST00000416529 OVOS2A0A0G2JMS6 1433 aa10.19□□□□□ -0.78
RBM39-209ENST00000416529 EXOC5O00471 708 aa10.19□□□□□ -0.78
RBM39-209ENST00000416529 HTATSF1O43719 755 aaKnown RBP10.19□□□□□ -0.78
RBM39-209ENST00000416529 NBPF6Q5VWK0 638 aa10.19□□□□□ -0.78
RBM39-209ENST00000416529 NBPF4Q96M43 638 aa10.19□□□□□ -0.78
RBM39-209ENST00000416529 STRN4Q9NRL3 753 aa10.19□□□□□ -0.78
RBM39-209ENST00000416529 SPG7Q9UQ90 795 aa10.19□□□□□ -0.78
RBM39-209ENST00000416529 ZBTB7CA1YPR0 619 aa10.18□□□□□ -0.78
RBM39-209ENST00000416529 OSBPP22059 807 aa10.18□□□□□ -0.78
RBM39-209ENST00000416529 WDR43Q15061 677 aaKnown RBP eCLIP10.18□□□□□ -0.78
RBM39-209ENST00000416529 PLEKHO1Q53GL0 409 aaPredicted RBP10.18□□□□□ -0.78
RBM39-209ENST00000416529 GAS2L2Q8NHY3 880 aa10.18□□□□□ -0.78
RBM39-209ENST00000416529 THSD7AQ9UPZ6 1657 aa10.18□□□□□ -0.78
RBM39-209ENST00000416529 WNK3Q9BYP7 1800 aa10.17□□□□□ -0.78
RBM39-209ENST00000416529 PCDH11XQ9BZA7 1347 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms