RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 ADAMTS7Q9UKP4 1686 aa22.11■■□□□ 1.13
CPNE1-208ENST00000414711 ERFEQ4G0M1 354 aa22.11■■□□□ 1.13
CPNE1-208ENST00000414711 EYA1Q99502 592 aa22.11■■□□□ 1.13
CPNE1-208ENST00000414711 TMEM88BA6NKF7 163 aa22.1■■□□□ 1.13
CPNE1-208ENST00000414711 NEUROD1Q13562 356 aa22.1■■□□□ 1.13
CPNE1-208ENST00000414711 ANKRD26Q9UPS8 1709 aa22.1■■□□□ 1.13
CPNE1-208ENST00000414711 AFDNP55196 1824 aaKnown RBP22.1■■□□□ 1.13
CPNE1-208ENST00000414711 NRXN2Q9P2S2 1712 aa22.09■■□□□ 1.13
CPNE1-208ENST00000414711 TESK2Q96S53 571 aa22.09■■□□□ 1.13
CPNE1-208ENST00000414711 TJP1Q07157 1748 aa22.09■■□□□ 1.13
CPNE1-208ENST00000414711 PPM1GO15355 546 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-208ENST00000414711 PTCD1O75127 700 aaKnown RBP22.08■■□□□ 1.13
CPNE1-208ENST00000414711 LDHDQ86WU2 507 aa22.08■■□□□ 1.13
CPNE1-208ENST00000414711 DICER1Q9UPY3 1922 aaKnown RBP22.08■■□□□ 1.12
CPNE1-208ENST00000414711 ZPR1O75312 459 aa22.07■■□□□ 1.12
CPNE1-208ENST00000414711 USPL1Q5W0Q7 1092 aa22.07■■□□□ 1.12
CPNE1-208ENST00000414711 C2CD5Q86YS7 1000 aa22.07■■□□□ 1.12
CPNE1-208ENST00000414711 DDNO94850 711 aaPredicted RBP22.06■■□□□ 1.12
CPNE1-208ENST00000414711 HSP90AB1P08238 724 aaKnown RBP22.05■■□□□ 1.12
CPNE1-208ENST00000414711 MAP2K1Q02750 393 aaPredicted RBP22.05■■□□□ 1.12
CPNE1-208ENST00000414711 NFIXQ14938 502 aa22.05■■□□□ 1.12
CPNE1-208ENST00000414711 CARMIL3Q8ND23 1372 aa22.04■■□□□ 1.12
CPNE1-208ENST00000414711 IQCA1LA6NCM1 817 aa22.04■■□□□ 1.12
CPNE1-208ENST00000414711 CABP4P57796 275 aa22.04■■□□□ 1.12
CPNE1-208ENST00000414711 WASHC2AQ641Q2 1341 aa22.04■■□□□ 1.12
CPNE1-208ENST00000414711 RASSF10A6NK89 507 aa22.03■■□□□ 1.12
CPNE1-208ENST00000414711 H0YIN7 160 aa22.03■■□□□ 1.12
CPNE1-208ENST00000414711 INTS5Q6P9B9 1019 aaKnown RBP22.03■■□□□ 1.12
CPNE1-208ENST00000414711 FER1L6Q2WGJ9 1857 aa22.03■■□□□ 1.12
CPNE1-208ENST00000414711 ITGBL1O95965 494 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-208ENST00000414711 SERPINB2P05120 415 aa22.01■■□□□ 1.11
CPNE1-208ENST00000414711 TAF1DQ9H5J8 278 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-208ENST00000414711 SOS1Q07889 1333 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-208ENST00000414711 ST20-MTHFSA0A0A6YYL1 179 aa22■■□□□ 1.11
CPNE1-208ENST00000414711 C21orf2O43822 256 aa22■■□□□ 1.11
CPNE1-208ENST00000414711 DEFB115Q30KQ5 88 aa22■■□□□ 1.11
CPNE1-208ENST00000414711 TAOK3Q9H2K8 898 aa22■■□□□ 1.11
CPNE1-208ENST00000414711 WDR33Q9C0J8 1336 aaKnown RBP22■■□□□ 1.11
CPNE1-208ENST00000414711 LTBP3Q9NS15 1303 aa22■■□□□ 1.11
CPNE1-208ENST00000414711 SCN4AP35499 1836 aa21.99■■□□□ 1.11
CPNE1-208ENST00000414711 THSD7BQ9C0I4 1608 aa21.99■■□□□ 1.11
CPNE1-208ENST00000414711 L3MBTL3Q96JM7 780 aaPredicted RBP21.99■■□□□ 1.11
CPNE1-208ENST00000414711 ZNF219Q9P2Y4 722 aaPredicted RBP21.99■■□□□ 1.11
CPNE1-208ENST00000414711 SLC24A1O60721 1099 aa21.98■■□□□ 1.11
CPNE1-208ENST00000414711 CFAP44Q96MT7 982 aa21.98■■□□□ 1.11
CPNE1-208ENST00000414711 EAPPQ56P03 285 aaPredicted RBP21.97■■□□□ 1.11
CPNE1-208ENST00000414711 ZNF622Q969S3 477 aaKnown RBP eCLIP21.97■■□□□ 1.11
CPNE1-208ENST00000414711 NARFQ9UHQ1 456 aa21.97■■□□□ 1.11
CPNE1-208ENST00000414711 PDE4DIPQ5VU43 2346 aa21.97■■□□□ 1.11
CPNE1-208ENST00000414711 COL15A1P39059 1388 aa21.97■■□□□ 1.11
CPNE1-208ENST00000414711 ZNF530Q6P9A1 599 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-208ENST00000414711 COL11A2P13942 1736 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-208ENST00000414711 ADAMTSL1Q8N6G6 1762 aa21.96■■□□□ 1.11
CPNE1-208ENST00000414711 ABT1Q9ULW3 272 aaKnown RBP21.95■■□□□ 1.1
CPNE1-208ENST00000414711 DNAJC10Q8IXB1 793 aa21.94■■□□□ 1.1
CPNE1-208ENST00000414711 BEGAINQ9BUH8 593 aa21.94■■□□□ 1.1
CPNE1-208ENST00000414711 BCL2L12Q9HB09 334 aa21.94■■□□□ 1.1
CPNE1-208ENST00000414711 ANKRD31Q8N7Z5 1873 aa21.94■■□□□ 1.1
CPNE1-208ENST00000414711 MTHFSP49914 203 aa21.93■■□□□ 1.1
CPNE1-208ENST00000414711 EIF4A2Q14240 407 aaKnown RBP21.93■■□□□ 1.1
CPNE1-208ENST00000414711 PLEKHO1Q53GL0 409 aaPredicted RBP21.93■■□□□ 1.1
CPNE1-208ENST00000414711 NFATC2IPQ8NCF5 419 aa21.93■■□□□ 1.1
CPNE1-208ENST00000414711 CLEC11AQ9Y240 323 aa21.93■■□□□ 1.1
CPNE1-208ENST00000414711 PDZRN3Q9UPQ7 1066 aa21.92■■□□□ 1.1
CPNE1-208ENST00000414711 TNRC18O15417 2968 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-208ENST00000414711 CNTROBQ8N137 903 aa21.9■■□□□ 1.1
CPNE1-208ENST00000414711 POLKQ9UBT6 870 aa21.9■■□□□ 1.1
CPNE1-208ENST00000414711 HACL1Q9UJ83 578 aa21.9■■□□□ 1.1
CPNE1-208ENST00000414711 LTBP1Q14766 1721 aa21.89■■□□□ 1.1
CPNE1-208ENST00000414711 PDE6BP35913 854 aa21.89■■□□□ 1.09
CPNE1-208ENST00000414711 AMOTQ4VCS5 1084 aa21.89■■□□□ 1.09
CPNE1-208ENST00000414711 C1orf141Q5JVX7 400 aa21.89■■□□□ 1.09
CPNE1-208ENST00000414711 MAP1SQ66K74 1059 aaPredicted RBP21.89■■□□□ 1.09
CPNE1-208ENST00000414711 BICDL1Q6ZP65 573 aa21.89■■□□□ 1.09
CPNE1-208ENST00000414711 CARD14Q9BXL6 1004 aa21.89■■□□□ 1.09
CPNE1-208ENST00000414711 MCOLN1Q9GZU1 580 aa21.89■■□□□ 1.09
CPNE1-208ENST00000414711 CYP19A1P11511 503 aaPredicted RBP21.88■■□□□ 1.09
CPNE1-208ENST00000414711 EPHX2P34913 555 aa21.88■■□□□ 1.09
CPNE1-208ENST00000414711 SOGA3Q5TF21 947 aa21.88■■□□□ 1.09
CPNE1-208ENST00000414711 PAXIP1Q6ZW49 1069 aaPredicted RBP21.88■■□□□ 1.09
CPNE1-208ENST00000414711 CAPNS2Q96L46 248 aa21.88■■□□□ 1.09
CPNE1-208ENST00000414711 BRIP1Q9BX63 1249 aa21.88■■□□□ 1.09
CPNE1-208ENST00000414711 TSKSQ9UJT2 592 aa21.88■■□□□ 1.09
CPNE1-208ENST00000414711 ZBTB1Q9Y2K1 713 aa21.88■■□□□ 1.09
CPNE1-208ENST00000414711 ZNF541Q9H0D2 1346 aa21.87■■□□□ 1.09
CPNE1-208ENST00000414711 ECE1P42892 770 aa21.86■■□□□ 1.09
CPNE1-208ENST00000414711 PRPF40BQ6NWY9 871 aaKnown RBP21.86■■□□□ 1.09
CPNE1-208ENST00000414711 PNMA8AQ86V59 439 aaPredicted RBP21.86■■□□□ 1.09
CPNE1-208ENST00000414711 SLX4Q8IY92 1834 aa21.85■■□□□ 1.09
CPNE1-208ENST00000414711 GRM1Q13255 1194 aa21.85■■□□□ 1.09
CPNE1-208ENST00000414711 CNKSR1Q969H4 720 aa21.85■■□□□ 1.09
CPNE1-208ENST00000414711 GPR101Q96P66 508 aaPredicted RBP21.85■■□□□ 1.09
CPNE1-208ENST00000414711 CACNA1SQ13698 1873 aa21.85■■□□□ 1.09
CPNE1-208ENST00000414711 ARFGEF2Q9Y6D5 1785 aa21.84■■□□□ 1.09
CPNE1-208ENST00000414711 PRR5LQ6MZQ0 368 aa21.84■■□□□ 1.09
CPNE1-208ENST00000414711 DDX21Q9NR30 783 aaKnown RBP eCLIP21.84■■□□□ 1.09
CPNE1-208ENST00000414711 RNF123Q5XPI4 1314 aa21.83■■□□□ 1.09
CPNE1-208ENST00000414711 CYP4F22Q6NT55 531 aa21.83■■□□□ 1.09
CPNE1-208ENST00000414711 CCDC24Q8N4L8 307 aa21.83■■□□□ 1.09
CPNE1-208ENST00000414711 SCN11AQ9UI33 1791 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms