RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 PRPF38BQ5VTL8 546 aaKnown RBP5.43□□□□□ -1.54
LINC01048-201ENST00000414480 ZNF385CQ66K41 422 aaPredicted RBP5.43□□□□□ -1.54
LINC01048-201ENST00000414480 SVOPQ8N4V2 548 aa5.43□□□□□ -1.54
LINC01048-201ENST00000414480 GPR161Q8N6U8 529 aaKnown RBP5.43□□□□□ -1.54
LINC01048-201ENST00000414480 ARMC2Q8NEN0 867 aa5.43□□□□□ -1.54
LINC01048-201ENST00000414480 NANOS1Q8WY41 292 aaKnown RBP5.43□□□□□ -1.54
LINC01048-201ENST00000414480 COL25A1Q9BXS0 654 aaPredicted RBP5.43□□□□□ -1.54
LINC01048-201ENST00000414480 TBC1D2Q9BYX2 928 aa5.43□□□□□ -1.54
LINC01048-201ENST00000414480 BRPF3Q9ULD4 1205 aa5.43□□□□□ -1.54
LINC01048-201ENST00000414480 DNMT3AQ9Y6K1 912 aaPredicted RBP5.43□□□□□ -1.54
LINC01048-201ENST00000414480 TNRQ92752 1358 aa5.42□□□□□ -1.54
LINC01048-201ENST00000414480 RBM10P98175 930 aaKnown RBP5.42□□□□□ -1.54
LINC01048-201ENST00000414480 NBPF14Q5TI25 921 aa5.42□□□□□ -1.54
LINC01048-201ENST00000414480 ZNF772Q68DY9 489 aaPredicted RBP5.42□□□□□ -1.54
LINC01048-201ENST00000414480 VASH1Q7L8A9 365 aaPredicted RBP5.42□□□□□ -1.54
LINC01048-201ENST00000414480 SH3RF1Q7Z6J0 888 aa5.42□□□□□ -1.54
LINC01048-201ENST00000414480 TRMT44Q8IYL2 757 aaKnown RBP5.42□□□□□ -1.54
LINC01048-201ENST00000414480 CCDC116Q8IYX3 515 aa5.42□□□□□ -1.54
LINC01048-201ENST00000414480 IQGAP1P46940 1657 aa5.42□□□□□ -1.54
LINC01048-201ENST00000414480 JCADQ9P266 1359 aa5.42□□□□□ -1.54
LINC01048-201ENST00000414480 ZC3H13Q5T200 1668 aaKnown RBP5.41□□□□□ -1.54
LINC01048-201ENST00000414480 RXRBP28702 533 aa5.41□□□□□ -1.54
LINC01048-201ENST00000414480 FOXK2Q01167 660 aa5.41□□□□□ -1.54
LINC01048-201ENST00000414480 PCDHB15Q9Y5E8 787 aa5.41□□□□□ -1.54
LINC01048-201ENST00000414480 SAMD9LQ8IVG5 1584 aa5.41□□□□□ -1.54
LINC01048-201ENST00000414480 ITSN2Q9NZM3 1697 aa5.4□□□□□ -1.54
LINC01048-201ENST00000414480 ROBO1Q9Y6N7 1651 aa5.4□□□□□ -1.54
LINC01048-201ENST00000414480 RGS12O14924 1447 aa5.4□□□□□ -1.54
LINC01048-201ENST00000414480 CDC42BPBQ9Y5S2 1711 aa5.4□□□□□ -1.54
LINC01048-201ENST00000414480 SLURP2P0DP57 97 aa5.4□□□□□ -1.54
LINC01048-201ENST00000414480 GPAT2Q6NUI2 795 aa5.4□□□□□ -1.54
LINC01048-201ENST00000414480 KANK3Q6NY19 840 aa5.4□□□□□ -1.54
LINC01048-201ENST00000414480 GGT6Q6P531 493 aa5.4□□□□□ -1.54
LINC01048-201ENST00000414480 THEMISQ8N1K5 641 aaPredicted RBP5.4□□□□□ -1.54
LINC01048-201ENST00000414480 CCDC155Q8N6L0 562 aa5.4□□□□□ -1.54
LINC01048-201ENST00000414480 PLCD4Q9BRC7 762 aa5.4□□□□□ -1.54
LINC01048-201ENST00000414480 ZMYND15Q9H091 742 aa5.4□□□□□ -1.54
LINC01048-201ENST00000414480 CWC22Q9HCG8 908 aaKnown RBP5.4□□□□□ -1.54
LINC01048-201ENST00000414480 PGPEP1Q9NXJ5 209 aa5.4□□□□□ -1.54
LINC01048-201ENST00000414480 TROQ12816 1431 aaPredicted RBP5.4□□□□□ -1.55
LINC01048-201ENST00000414480 MIA2Q96PC5 1412 aa5.4□□□□□ -1.55
LINC01048-201ENST00000414480 A2MP01023 1474 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 PZPP20742 1482 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 MAP3K1Q13233 1512 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 KDM5DQ9BY66 1539 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 UGGT1Q9NYU2 1555 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 PER1O15534 1290 aaPredicted RBP5.39□□□□□ -1.55
LINC01048-201ENST00000414480 SPINT1O43278 529 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 IRS1P35568 1242 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 DEKP35659 375 aaKnown RBP5.39□□□□□ -1.55
LINC01048-201ENST00000414480 RNFT1Q5M7Z0 435 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 SH3BP5LQ7L8J4 393 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 CERS3Q8IU89 383 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 SPATA31A6Q5VVP1 1343 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 TMEM94Q12767 1356 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 NLRP1Q9C000 1473 aa5.39□□□□□ -1.55
LINC01048-201ENST00000414480 COL16A1Q07092 1604 aaPredicted RBP5.38□□□□□ -1.55
LINC01048-201ENST00000414480 MAGEB6P1A0A0J9YX57 407 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 SLC35F4A4IF30 521 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 FIGNL2A6NMB9 653 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 ARHGEF15O94989 841 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 ITGA6P23229 1130 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 MARSP56192 900 aaKnown RBP5.38□□□□□ -1.55
LINC01048-201ENST00000414480 BARGINQ6ZT62 677 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 Q6ZVU0 165 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 RIC3Q7Z5B4 369 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 CABLES1Q8TDN4 633 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 TSC1Q92574 1164 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 GPKOWQ92917 476 aaPredicted RBP eCLIP5.38□□□□□ -1.55
LINC01048-201ENST00000414480 SCARF2Q96GP6 870 aaPredicted RBP5.38□□□□□ -1.55
LINC01048-201ENST00000414480 FGD6Q6ZV73 1430 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 ATP7AQ04656 1500 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 FAM135AQ9P2D6 1515 aa5.38□□□□□ -1.55
LINC01048-201ENST00000414480 CDC14CA4D256 554 aa5.37□□□□□ -1.55
LINC01048-201ENST00000414480 LTKP29376 864 aa5.37□□□□□ -1.55
LINC01048-201ENST00000414480 PPP1R26Q5T8A7 1209 aaPredicted RBP5.37□□□□□ -1.55
LINC01048-201ENST00000414480 FOXD4L5Q5VV16 416 aaPredicted RBP5.37□□□□□ -1.55
LINC01048-201ENST00000414480 SV2AQ7L0J3 742 aa5.37□□□□□ -1.55
LINC01048-201ENST00000414480 FOXD4L4Q8WXT5 416 aaPredicted RBP5.37□□□□□ -1.55
LINC01048-201ENST00000414480 ZNF428Q96B54 188 aa5.37□□□□□ -1.55
LINC01048-201ENST00000414480 MTMR7Q9Y216 660 aa5.37□□□□□ -1.55
LINC01048-201ENST00000414480 SPAG9O60271 1321 aaKnown RBP5.37□□□□□ -1.55
LINC01048-201ENST00000414480 INO80Q9ULG1 1556 aaPredicted RBP5.37□□□□□ -1.55
LINC01048-201ENST00000414480 PREX2Q70Z35 1606 aa5.37□□□□□ -1.55
LINC01048-201ENST00000414480 SETQ01105 290 aaPredicted RBP5.36□□□□□ -1.55
LINC01048-201ENST00000414480 CBLBQ13191 982 aa5.36□□□□□ -1.55
LINC01048-201ENST00000414480 NEUROD2Q15784 382 aa5.36□□□□□ -1.55
LINC01048-201ENST00000414480 CSPP1Q1MSJ5 1256 aa5.36□□□□□ -1.55
LINC01048-201ENST00000414480 RTL5Q5HYW3 569 aaPredicted RBP5.36□□□□□ -1.55
LINC01048-201ENST00000414480 AEBP1Q8IUX7 1158 aa5.36□□□□□ -1.55
LINC01048-201ENST00000414480 PARP9Q8IXQ6 854 aa5.36□□□□□ -1.55
LINC01048-201ENST00000414480 FAM177A1Q8N128 213 aaPredicted RBP5.36□□□□□ -1.55
LINC01048-201ENST00000414480 CNPY4Q8N129 248 aa5.36□□□□□ -1.55
LINC01048-201ENST00000414480 HELBQ8NG08 1087 aaPredicted RBP5.36□□□□□ -1.55
LINC01048-201ENST00000414480 WHAMMQ8TF30 809 aa5.36□□□□□ -1.55
LINC01048-201ENST00000414480 CARD14Q9BXL6 1004 aa5.36□□□□□ -1.55
LINC01048-201ENST00000414480 PRDM10Q9NQV6 1147 aa5.36□□□□□ -1.55
LINC01048-201ENST00000414480 CDV3Q9UKY7 258 aaKnown RBP5.36□□□□□ -1.55
LINC01048-201ENST00000414480 ARHGAP23Q9P227 1491 aa5.36□□□□□ -1.55
LINC01048-201ENST00000414480 PHLPP1O60346 1717 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms