RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 SALL3Q9BXA9 1300 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 ARHGEF10O15013 1369 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 CDC45O75419 566 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 RABEP1Q15276 862 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 INTS3Q68E01 1043 aaKnown RBP3.89□□□□□ -1.79
CUL3-204ENST00000409777 FTSJ3Q8IY81 847 aaKnown RBP3.89□□□□□ -1.79
CUL3-204ENST00000409777 USP26Q9BXU7 913 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 OSBPL3Q9H4L5 887 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 DCTPP1Q9H773 170 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 CWC22Q9HCG8 908 aaKnown RBP3.89□□□□□ -1.79
CUL3-204ENST00000409777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.89□□□□□ -1.792e-7■■■□□ 15.6
CUL3-204ENST00000409777 PRDM4Q9UKN5 801 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 ZDHHC9Q9Y397 364 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 CFAP65Q6ZU64 1925 aaKnown RBP3.89□□□□□ -1.79
CUL3-204ENST00000409777 SSFA2P28290 1259 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.89□□□□□ -1.79
CUL3-204ENST00000409777 PLEKHM2Q8IWE5 1019 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 MICALL2Q8IY33 904 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 MAP7D2Q96T17 732 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 TRAIPQ9BWF2 469 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 BCL2L13Q9BXK5 485 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 SSH2Q76I76 1423 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 RIMS2Q9UQ26 1411 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 MED1Q15648 1581 aaPredicted RBP3.89□□□□□ -1.79
CUL3-204ENST00000409777 PXDNLA1KZ92 1463 aa3.89□□□□□ -1.79
CUL3-204ENST00000409777 EPB41L2O43491 1005 aaKnown RBP3.88□□□□□ -1.79
CUL3-204ENST00000409777 PTGER2P43116 358 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 NUCB2P80303 420 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 TTC22Q5TAA0 569 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 ITPRIPQ8IWB1 547 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 EMILIN3Q9NT22 766 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 GPR37O15354 613 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 U2AF1L5P0DN76 240 aaPredicted RBP3.88□□□□□ -1.79
CUL3-204ENST00000409777 GTF2F1P35269 517 aaKnown RBP eCLIP3.88□□□□□ -1.79
CUL3-204ENST00000409777 NASPP49321 788 aaPredicted RBP3.88□□□□□ -1.79
CUL3-204ENST00000409777 U2AF1Q01081 240 aaKnown RBP eCLIP3.88□□□□□ -1.79
CUL3-204ENST00000409777 CUL4AQ13619 759 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 NFE2L2Q16236 605 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 ZSCAN23Q3MJ62 389 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 NAP1L5Q96NT1 182 aaPredicted RBP3.88□□□□□ -1.79
CUL3-204ENST00000409777 TRAK1Q9UPV9 953 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 IL13P35225 146 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 FLIIQ13045 1269 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 MCM6Q14566 821 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 PARP9Q8IXQ6 854 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 TMEM87AQ8NBN3 555 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 GPT2Q8TD30 523 aa3.88□□□□□ -1.79
CUL3-204ENST00000409777 CRB1P82279 1406 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 A2ML1A8K2U0 1454 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 DIAPH1O60610 1272 aaKnown RBP3.87□□□□□ -1.79
CUL3-204ENST00000409777 DSG2Q14126 1118 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 KIAA1211Q6ZU35 1233 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 ANKRD44Q8N8A2 993 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 RBSNQ9H1K0 784 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 ZKSCAN5Q9Y2L8 839 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 KDM3BQ7LBC6 1761 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 PHRF1Q9P1Y6 1649 aaKnown RBP3.87□□□□□ -1.79
CUL3-204ENST00000409777 OVOS2A0A0J9YW53 1432 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 OVOS2Q6IE36 1432 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 DYNC1I1O14576 645 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 LRSAM1Q6UWE0 723 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 MTERF4Q7Z6M4 381 aaKnown RBP3.87□□□□□ -1.79
CUL3-204ENST00000409777 SIRT1Q96EB6 747 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 LNPKQ9C0E8 428 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 POLKQ9UBT6 870 aa3.87□□□□□ -1.79
CUL3-204ENST00000409777 RPAP1Q9BWH6 1393 aaPredicted RBP3.87□□□□□ -1.79
CUL3-204ENST00000409777 NWD1Q149M9 1564 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 MYH15Q9Y2K3 1946 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 A6NJR5 290 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 GNAI1P63096 354 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 TMEM132EQ6IEE7 984 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 CERKQ8TCT0 537 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 SLC52A1Q9NWF4 448 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 TERF2IPQ9NYB0 399 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 CEP170BQ9Y4F5 1589 aaPredicted RBP3.86□□□□□ -1.79
CUL3-204ENST00000409777 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.86□□□□□ -1.79
CUL3-204ENST00000409777 BRD1O95696 1058 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 CSPP1Q1MSJ5 1256 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 RPAP2Q8IXW5 612 aaPredicted RBP3.86□□□□□ -1.79
CUL3-204ENST00000409777 SMAP1Q8IYB5 467 aaPredicted RBP3.86□□□□□ -1.79
CUL3-204ENST00000409777 INTS4Q96HW7 963 aaKnown RBP3.86□□□□□ -1.79
CUL3-204ENST00000409777 API5Q9BZZ5 524 aaKnown RBP3.86□□□□□ -1.79
CUL3-204ENST00000409777 MBIPQ9NS73 344 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 SPTLC3Q9NUV7 552 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 ADAMTS7Q9UKP4 1686 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 UBR1Q8IWV7 1749 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 ANAPC15P60006 121 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 UTP14CQ5TAP6 766 aaKnown RBP3.86□□□□□ -1.79
CUL3-204ENST00000409777 TSPYL6Q8N831 410 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 PTPRCP08575 1304 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 AOX1Q06278 1338 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 USP31Q70CQ4 1352 aa3.86□□□□□ -1.79
CUL3-204ENST00000409777 GOLGA6L22H0YM25 854 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 UVSSAQ2YD98 709 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 DPY19L2Q6NUT2 758 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 CEP85Q6P2H3 762 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 TMC2Q8TDI7 906 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 TRIM44Q96DX7 344 aaPredicted RBP3.85□□□□□ -1.79
CUL3-204ENST00000409777 PHACTR3Q96KR7 559 aa3.85□□□□□ -1.79
CUL3-204ENST00000409777 TMEM63CQ9P1W3 806 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms