RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 ASXL1Q8IXJ9 1541 aa12.05□□□□□ -0.48
KDM3A-202ENST00000409064 TSPOAP1O95153 1857 aa12.05□□□□□ -0.48
KDM3A-202ENST00000409064 ARHGEF10O15013 1369 aa12.05□□□□□ -0.48
KDM3A-202ENST00000409064 MVPQ14764 893 aaKnown RBP12.04□□□□□ -0.48
KDM3A-202ENST00000409064 RPAP2Q8IXW5 612 aaPredicted RBP12.04□□□□□ -0.48
KDM3A-202ENST00000409064 CCDC152Q4G0S7 254 aa12.04□□□□□ -0.48
KDM3A-202ENST00000409064 NUTM1Q86Y26 1132 aa12.04□□□□□ -0.48
KDM3A-202ENST00000409064 UBAC1Q9BSL1 405 aa12.04□□□□□ -0.48
KDM3A-202ENST00000409064 PCDH11XQ9BZA7 1347 aa12.04□□□□□ -0.48
KDM3A-202ENST00000409064 PCDH11YQ9BZA8 1340 aa12.04□□□□□ -0.48
KDM3A-202ENST00000409064 MKNK2Q9HBH9 465 aa12.04□□□□□ -0.48
KDM3A-202ENST00000409064 ABCC11Q96J66 1382 aa12.04□□□□□ -0.48
KDM3A-202ENST00000409064 RBM26Q5T8P6 1007 aaKnown RBP12.04□□□□□ -0.48
KDM3A-202ENST00000409064 ZC3H12CQ9C0D7 883 aaKnown RBP12.04□□□□□ -0.48
KDM3A-202ENST00000409064 MYO1BO43795 1136 aa12.03□□□□□ -0.48
KDM3A-202ENST00000409064 IGHDP01880 384 aa12.03□□□□□ -0.48
KDM3A-202ENST00000409064 MTHFSDQ2M296 383 aaKnown RBP12.03□□□□□ -0.48
KDM3A-202ENST00000409064 ZNF772Q68DY9 489 aaPredicted RBP12.03□□□□□ -0.48
KDM3A-202ENST00000409064 ANKRD18AQ8IVF6 992 aa12.03□□□□□ -0.48
KDM3A-202ENST00000409064 BOLA2Q9H3K6 86 aa12.03□□□□□ -0.48
KDM3A-202ENST00000409064 CHMP4BP1P59074 171 aa12.03□□□□□ -0.48
KDM3A-202ENST00000409064 MAP3K12Q12852 859 aa12.03□□□□□ -0.48
KDM3A-202ENST00000409064 KIF1BPQ96EK5 621 aa12.03□□□□□ -0.48
KDM3A-202ENST00000409064 CCDC8Q9H0W5 538 aaPredicted RBP12.03□□□□□ -0.48
KDM3A-202ENST00000409064 CHPF2Q9P2E5 772 aa12.03□□□□□ -0.48
KDM3A-202ENST00000409064 LRRFIP2Q9Y608 721 aaKnown RBP12.03□□□□□ -0.48
KDM3A-202ENST00000409064 F8W031 263 aaPredicted RBP12.03□□□□□ -0.48
KDM3A-202ENST00000409064 SKOR2Q2VWA4 1001 aaPredicted RBP12.03□□□□□ -0.48
KDM3A-202ENST00000409064 SLF2Q8IX21 1173 aa12.03□□□□□ -0.48
KDM3A-202ENST00000409064 FEZ1Q99689 392 aa12.03□□□□□ -0.48
KDM3A-202ENST00000409064 MBIPQ9NS73 344 aa12.02□□□□□ -0.48
KDM3A-202ENST00000409064 PIK3C2GO75747 1445 aa12.02□□□□□ -0.49
KDM3A-202ENST00000409064 MSNP26038 577 aaKnown RBP12.02□□□□□ -0.49
KDM3A-202ENST00000409064 GPR162Q16538 588 aa12.02□□□□□ -0.49
KDM3A-202ENST00000409064 BICD2Q8TD16 824 aa12.02□□□□□ -0.49
KDM3A-202ENST00000409064 PIBF1Q8WXW3 757 aa12.02□□□□□ -0.49
KDM3A-202ENST00000409064 IQSEC3Q9UPP2 1182 aaPredicted RBP12.02□□□□□ -0.49
KDM3A-202ENST00000409064 RARSP54136 660 aaKnown RBP12.02□□□□□ -0.49
KDM3A-202ENST00000409064 NOC3LQ8WTT2 800 aaKnown RBP12.02□□□□□ -0.49
KDM3A-202ENST00000409064 SNRKQ9NRH2 765 aa12.02□□□□□ -0.49
KDM3A-202ENST00000409064 IBSPP21815 317 aaPredicted RBP12.01□□□□□ -0.49
KDM3A-202ENST00000409064 ZNF287Q9HBT7 754 aa12.01□□□□□ -0.49
KDM3A-202ENST00000409064 SOGA3Q5TF21 947 aa12.01□□□□□ -0.49
KDM3A-202ENST00000409064 CWC27Q6UX04 472 aaKnown RBP12.01□□□□□ -0.49
KDM3A-202ENST00000409064 NEK4P51957 841 aa12.01□□□□□ -0.49
KDM3A-202ENST00000409064 TRAK2O60296 914 aa12.01□□□□□ -0.49
KDM3A-202ENST00000409064 MRE11P49959 708 aa12.01□□□□□ -0.49
KDM3A-202ENST00000409064 UTP14AQ9BVJ6 771 aaKnown RBP12.01□□□□□ -0.49
KDM3A-202ENST00000409064 CTNNA3Q9UI47 895 aa12.01□□□□□ -0.49
KDM3A-202ENST00000409064 CCDC69A6NI79 296 aa12□□□□□ -0.49
KDM3A-202ENST00000409064 LDHCP07864 332 aa12□□□□□ -0.49
KDM3A-202ENST00000409064 FAM182BQ5T319 152 aa12□□□□□ -0.49
KDM3A-202ENST00000409064 NYXQ9GZU5 481 aa12□□□□□ -0.49
KDM3A-202ENST00000409064 NPHP4O75161 1426 aaPredicted RBP12□□□□□ -0.49
KDM3A-202ENST00000409064 TRIM22Q8IYM9 498 aa12□□□□□ -0.49
KDM3A-202ENST00000409064 BECN2A8MW95 431 aa11.99□□□□□ -0.49
KDM3A-202ENST00000409064 CNBD1Q8NA66 436 aa11.99□□□□□ -0.49
KDM3A-202ENST00000409064 NAPBQ9H115 298 aa11.99□□□□□ -0.49
KDM3A-202ENST00000409064 KRI1Q8N9T8 703 aaKnown RBP11.99□□□□□ -0.49
KDM3A-202ENST00000409064 HDAC9Q9UKV0 1011 aa11.99□□□□□ -0.49
KDM3A-202ENST00000409064 ABCC1P33527 1531 aa11.99□□□□□ -0.49
KDM3A-202ENST00000409064 PRKCSHP14314 528 aaPredicted RBP11.99□□□□□ -0.49
KDM3A-202ENST00000409064 MCM4P33991 863 aa11.99□□□□□ -0.49
KDM3A-202ENST00000409064 ARHGEF5Q12774 1597 aa11.99□□□□□ -0.49
KDM3A-202ENST00000409064 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
KDM3A-202ENST00000409064 KDM5DQ9BY66 1539 aa11.98□□□□□ -0.49
KDM3A-202ENST00000409064 TPM2P07951 284 aa11.98□□□□□ -0.49
KDM3A-202ENST00000409064 ZNF444Q8N0Y2 327 aaPredicted RBP11.98□□□□□ -0.49
KDM3A-202ENST00000409064 GJA3Q9Y6H8 435 aa11.98□□□□□ -0.49
KDM3A-202ENST00000409064 RIMBP2O15034 1052 aa11.98□□□□□ -0.49
KDM3A-202ENST00000409064 ALDH1L2Q3SY69 923 aa11.98□□□□□ -0.49
KDM3A-202ENST00000409064 A0A1W2PP64 1363 aa11.98□□□□□ -0.49
KDM3A-202ENST00000409064 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
KDM3A-202ENST00000409064 WWC2Q6AWC2 1192 aa11.98□□□□□ -0.49
KDM3A-202ENST00000409064 PUS7Q96PZ0 661 aaKnown RBP11.98□□□□□ -0.49
KDM3A-202ENST00000409064 STK3Q13188 491 aa11.97□□□□□ -0.49
KDM3A-202ENST00000409064 LMBR1LQ6UX01 489 aa11.97□□□□□ -0.49
KDM3A-202ENST00000409064 GLRX3O76003 335 aaKnown RBP11.97□□□□□ -0.49
KDM3A-202ENST00000409064 TRIM37O94972 964 aa11.97□□□□□ -0.49
KDM3A-202ENST00000409064 BAG3O95817 575 aa11.97□□□□□ -0.49
KDM3A-202ENST00000409064 LMOD1P29536 600 aaPredicted RBP11.97□□□□□ -0.49
KDM3A-202ENST00000409064 TBC1D2Q9BYX2 928 aa11.97□□□□□ -0.49
KDM3A-202ENST00000409064 RANBP6O60518 1105 aaKnown RBP11.97□□□□□ -0.49
KDM3A-202ENST00000409064 SLC4A8Q2Y0W8 1093 aa11.97□□□□□ -0.49
KDM3A-202ENST00000409064 MSL1Q68DK7 614 aa11.97□□□□□ -0.49
KDM3A-202ENST00000409064 CCDC24Q8N4L8 307 aa11.97□□□□□ -0.49
KDM3A-202ENST00000409064 CDK5RAP3Q96JB5 506 aa11.97□□□□□ -0.49
KDM3A-202ENST00000409064 VEZTQ9HBM0 779 aa11.97□□□□□ -0.49
KDM3A-202ENST00000409064 DDX49Q9Y6V7 483 aaKnown RBP11.97□□□□□ -0.49
KDM3A-202ENST00000409064 RNMTO43148 476 aaKnown RBP11.96□□□□□ -0.49
KDM3A-202ENST00000409064 NF2P35240 595 aa11.96□□□□□ -0.49
KDM3A-202ENST00000409064 PIK3R4Q99570 1358 aa11.96□□□□□ -0.49
KDM3A-202ENST00000409064 SMARCA5O60264 1052 aaPredicted RBP11.96□□□□□ -0.49
KDM3A-202ENST00000409064 TBC1D32Q96NH3 1257 aa11.96□□□□□ -0.49
KDM3A-202ENST00000409064 HOOK1Q9UJC3 728 aaKnown RBP11.96□□□□□ -0.49
KDM3A-202ENST00000409064 NPC1L1Q9UHC9 1359 aa11.96□□□□□ -0.49
KDM3A-202ENST00000409064 ZNF76P36508 570 aa11.96□□□□□ -0.5
KDM3A-202ENST00000409064 CCDC96Q2M329 555 aa11.96□□□□□ -0.5
KDM3A-202ENST00000409064 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.5
KDM3A-202ENST00000409064 IMMTQ16891 758 aaKnown RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms