RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 PRELPP51888 382 aa8.58□□□□□ -1.04
RPA3-204ENST00000406109 DDR1Q08345 913 aa8.58□□□□□ -1.04
RPA3-204ENST00000406109 PIM2Q9P1W9 311 aa8.58□□□□□ -1.04
RPA3-204ENST00000406109 PLEKHG2Q9H7P9 1386 aa8.58□□□□□ -1.04
RPA3-204ENST00000406109 KDM6AO15550 1401 aaPredicted RBP8.57□□□□□ -1.04
RPA3-204ENST00000406109 ADAMTS7Q9UKP4 1686 aa8.57□□□□□ -1.04
RPA3-204ENST00000406109 C19orf67A6NJJ6 358 aa8.57□□□□□ -1.04
RPA3-204ENST00000406109 RFC4P35249 363 aa8.57□□□□□ -1.04
RPA3-204ENST00000406109 EIF4A2Q14240 407 aaKnown RBP8.57□□□□□ -1.04
RPA3-204ENST00000406109 FKBP8Q14318 412 aa8.57□□□□□ -1.04
RPA3-204ENST00000406109 DALRD3Q5D0E6 543 aaKnown RBP8.57□□□□□ -1.04
RPA3-204ENST00000406109 CHADLQ6NUI6 762 aa8.57□□□□□ -1.04
RPA3-204ENST00000406109 SRP68Q9UHB9 627 aaKnown RBP8.57□□□□□ -1.04
RPA3-204ENST00000406109 PARP3Q9Y6F1 533 aa8.57□□□□□ -1.04
RPA3-204ENST00000406109 TM4SF1P30408 202 aa8.56□□□□□ -1.04
RPA3-204ENST00000406109 CHRNA5P30532 468 aa8.56□□□□□ -1.04
RPA3-204ENST00000406109 C16orf71Q8IYS4 520 aaPredicted RBP8.56□□□□□ -1.04
RPA3-204ENST00000406109 TNS4Q8IZW8 715 aa8.56□□□□□ -1.04
RPA3-204ENST00000406109 RNF181Q9P0P0 153 aa8.56□□□□□ -1.04
RPA3-204ENST00000406109 TNRC6CQ9HCJ0 1690 aaKnown RBP8.56□□□□□ -1.04
RPA3-204ENST00000406109 KDM2BQ8NHM5 1336 aa8.55□□□□□ -1.04
RPA3-204ENST00000406109 USP42Q9H9J4 1324 aaKnown RBP8.55□□□□□ -1.04
RPA3-204ENST00000406109 POLRMTO00411 1230 aaKnown RBP8.55□□□□□ -1.04
RPA3-204ENST00000406109 TNRC18O15417 2968 aaPredicted RBP8.55□□□□□ -1.04
RPA3-204ENST00000406109 CRKLP46109 303 aaKnown RBP8.55□□□□□ -1.04
RPA3-204ENST00000406109 INTS5Q6P9B9 1019 aaKnown RBP8.55□□□□□ -1.04
RPA3-204ENST00000406109 CCDC88AQ3V6T2 1871 aa8.55□□□□□ -1.04
RPA3-204ENST00000406109 POTECB2RU33 542 aa8.54□□□□□ -1.04
RPA3-204ENST00000406109 PTCD1O75127 700 aaKnown RBP8.54□□□□□ -1.04
RPA3-204ENST00000406109 RASSF7Q02833 373 aa8.54□□□□□ -1.04
RPA3-204ENST00000406109 SMC1BQ8NDV3 1235 aa8.54□□□□□ -1.04
RPA3-204ENST00000406109 AFDNP55196 1824 aaKnown RBP8.54□□□□□ -1.04
RPA3-204ENST00000406109 PRR29P0C7W0 189 aa8.53□□□□□ -1.04
RPA3-204ENST00000406109 EIF4G2P78344 907 aaKnown RBP eCLIP8.53□□□□□ -1.04
RPA3-204ENST00000406109 CDCA8Q53HL2 280 aa8.53□□□□□ -1.04
RPA3-204ENST00000406109 NFATC2IPQ8NCF5 419 aa8.53□□□□□ -1.04
RPA3-204ENST00000406109 TJP1Q07157 1748 aa8.53□□□□□ -1.04
RPA3-204ENST00000406109 ZC3H4Q9UPT8 1303 aaKnown RBP8.53□□□□□ -1.04
RPA3-204ENST00000406109 NRXN2Q9P2S2 1712 aa8.52□□□□□ -1.05
RPA3-204ENST00000406109 GLTPD2A6NH11 291 aa8.52□□□□□ -1.05
RPA3-204ENST00000406109 HSP90AB1P08238 724 aaKnown RBP8.52□□□□□ -1.05
RPA3-204ENST00000406109 HSPA1AP0DMV8 641 aaKnown RBP8.52□□□□□ -1.05
RPA3-204ENST00000406109 HSPA1BP0DMV9 641 aaKnown RBP8.52□□□□□ -1.05
RPA3-204ENST00000406109 HSPA5P11021 654 aaKnown RBP8.52□□□□□ -1.05
RPA3-204ENST00000406109 CABP4P57796 275 aa8.52□□□□□ -1.05
RPA3-204ENST00000406109 AEBP1Q8IUX7 1158 aa8.52□□□□□ -1.05
RPA3-204ENST00000406109 VEGFAP15692 232 aaPredicted RBP8.51□□□□□ -1.05
RPA3-204ENST00000406109 LMNB1P20700 586 aa8.51□□□□□ -1.05
RPA3-204ENST00000406109 TNNT2P45379 298 aaPredicted RBP8.51□□□□□ -1.05
RPA3-204ENST00000406109 MTHFSP49914 203 aa8.51□□□□□ -1.05
RPA3-204ENST00000406109 PLEKHO1Q53GL0 409 aaPredicted RBP8.51□□□□□ -1.05
RPA3-204ENST00000406109 USPL1Q5W0Q7 1092 aa8.51□□□□□ -1.05
RPA3-204ENST00000406109 ZNF530Q6P9A1 599 aaPredicted RBP8.51□□□□□ -1.05
RPA3-204ENST00000406109 POLR3GLQ9BT43 218 aa8.51□□□□□ -1.05
RPA3-204ENST00000406109 BCL2L12Q9HB09 334 aa8.51□□□□□ -1.05
RPA3-204ENST00000406109 DLEC1Q9Y238 1755 aa8.5□□□□□ -1.05
RPA3-204ENST00000406109 NFKBIEO00221 500 aa8.5□□□□□ -1.05
RPA3-204ENST00000406109 NFIXQ14938 502 aa8.5□□□□□ -1.05
RPA3-204ENST00000406109 AMOTQ4VCS5 1084 aa8.5□□□□□ -1.05
RPA3-204ENST00000406109 SCN11AQ9UI33 1791 aa8.5□□□□□ -1.05
RPA3-204ENST00000406109 SOS1Q07889 1333 aaPredicted RBP8.5□□□□□ -1.05
RPA3-204ENST00000406109 DICER1Q9UPY3 1922 aaKnown RBP8.49□□□□□ -1.05
RPA3-204ENST00000406109 MKI67P46013 3256 aaKnown RBP8.49□□□□□ -1.05
RPA3-204ENST00000406109 CYP19A1P11511 503 aaPredicted RBP8.49□□□□□ -1.05
RPA3-204ENST00000406109 DNAJC10Q8IXB1 793 aa8.49□□□□□ -1.05
RPA3-204ENST00000406109 TIAM2Q8IVF5 1701 aa8.49□□□□□ -1.05
RPA3-204ENST00000406109 CARMIL3Q8ND23 1372 aa8.48□□□□□ -1.05
RPA3-204ENST00000406109 ZPR1O75312 459 aa8.48□□□□□ -1.05
RPA3-204ENST00000406109 GABBR2O75899 941 aa8.48□□□□□ -1.05
RPA3-204ENST00000406109 TTLL6Q8N841 843 aa8.48□□□□□ -1.05
RPA3-204ENST00000406109 LGR6Q9HBX8 967 aa8.48□□□□□ -1.05
RPA3-204ENST00000406109 NARFQ9UHQ1 456 aa8.48□□□□□ -1.05
RPA3-204ENST00000406109 FER1L6Q2WGJ9 1857 aa8.48□□□□□ -1.05
RPA3-204ENST00000406109 ANKRD31Q8N7Z5 1873 aa8.47□□□□□ -1.05
RPA3-204ENST00000406109 SERPINB2P05120 415 aa8.47□□□□□ -1.05
RPA3-204ENST00000406109 POTEIP0CG38 1075 aa8.47□□□□□ -1.05
RPA3-204ENST00000406109 POTEJP0CG39 1038 aa8.47□□□□□ -1.05
RPA3-204ENST00000406109 SLC39A6Q13433 755 aa8.47□□□□□ -1.05
RPA3-204ENST00000406109 C1orf141Q5JVX7 400 aa8.47□□□□□ -1.05
RPA3-204ENST00000406109 SLC52A2Q9HAB3 445 aa8.47□□□□□ -1.05
RPA3-204ENST00000406109 ZBTB1Q9Y2K1 713 aa8.47□□□□□ -1.05
RPA3-204ENST00000406109 VIRMAQ69YN4 1812 aaKnown RBP8.47□□□□□ -1.05
RPA3-204ENST00000406109 CENPFP49454 3210 aa8.46□□□□□ -1.06
RPA3-204ENST00000406109 IL13P35225 146 aa8.46□□□□□ -1.06
RPA3-204ENST00000406109 SULT6B1Q6IMI4 303 aa8.46□□□□□ -1.06
RPA3-204ENST00000406109 C2CD5Q86YS7 1000 aa8.46□□□□□ -1.06
RPA3-204ENST00000406109 CREBZFQ9NS37 354 aa8.46□□□□□ -1.06
RPA3-204ENST00000406109 COL15A1P39059 1388 aa8.46□□□□□ -1.06
RPA3-204ENST00000406109 MRC1P22897 1456 aa8.45□□□□□ -1.06
RPA3-204ENST00000406109 H0YIN7 160 aa8.45□□□□□ -1.06
RPA3-204ENST00000406109 FOXN1O15353 648 aa8.45□□□□□ -1.06
RPA3-204ENST00000406109 AKAP4Q5JQC9 854 aa8.45□□□□□ -1.06
RPA3-204ENST00000406109 MKRN1Q9UHC7 482 aaKnown RBP8.45□□□□□ -1.06
RPA3-204ENST00000406109 PASKQ96RG2 1323 aa8.45□□□□□ -1.06
RPA3-204ENST00000406109 COL11A2P13942 1736 aaPredicted RBP8.45□□□□□ -1.06
RPA3-204ENST00000406109 SLX4Q8IY92 1834 aa8.45□□□□□ -1.06
RPA3-204ENST00000406109 RNMTO43148 476 aaKnown RBP8.44□□□□□ -1.06
RPA3-204ENST00000406109 C21orf2O43822 256 aa8.44□□□□□ -1.06
RPA3-204ENST00000406109 EIF5P55010 431 aaKnown RBP8.44□□□□□ -1.06
RPA3-204ENST00000406109 PANK3Q9H999 370 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms