RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TEAD4Q15561 434 aa9.23□□□□□ -0.93
HMGB1P13-201ENST00000406019 SV2AQ7L0J3 742 aa9.23□□□□□ -0.93
HMGB1P13-201ENST00000406019 ANKMY2Q8IV38 441 aa9.23□□□□□ -0.93
HMGB1P13-201ENST00000406019 C7orf43Q8WVR3 580 aa9.23□□□□□ -0.93
HMGB1P13-201ENST00000406019 TSPAN10Q9H1Z9 355 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P13-201ENST00000406019 SEC13P55735 322 aa9.22□□□□□ -0.93
HMGB1P13-201ENST00000406019 TBCELQ5QJ74 424 aa9.22□□□□□ -0.93
HMGB1P13-201ENST00000406019 LARP1Q6PKG0 1096 aaKnown RBP9.22□□□□□ -0.93
HMGB1P13-201ENST00000406019 GAS2L1Q99501 681 aaPredicted RBP9.22□□□□□ -0.93
HMGB1P13-201ENST00000406019 CRISPLD1Q9H336 500 aa9.22□□□□□ -0.93
HMGB1P13-201ENST00000406019 ZMIZ1Q9ULJ6 1067 aa9.22□□□□□ -0.93
HMGB1P13-201ENST00000406019 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P13-201ENST00000406019 CDC14CA4D256 554 aa9.21□□□□□ -0.94
HMGB1P13-201ENST00000406019 EML1O00423 815 aa9.21□□□□□ -0.94
HMGB1P13-201ENST00000406019 RFX1P22670 979 aa9.21□□□□□ -0.94
HMGB1P13-201ENST00000406019 HIRAP54198 1017 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P13-201ENST00000406019 SH3PXD2AQ5TCZ1 1133 aa9.21□□□□□ -0.94
HMGB1P13-201ENST00000406019 CCDC82Q8N4S0 544 aa9.21□□□□□ -0.94
HMGB1P13-201ENST00000406019 COL25A1Q9BXS0 654 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P13-201ENST00000406019 GPAMQ9HCL2 828 aa9.21□□□□□ -0.94
HMGB1P13-201ENST00000406019 SERPINA10Q9UK55 444 aa9.21□□□□□ -0.94
HMGB1P13-201ENST00000406019 GTF2E1P29083 439 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P13-201ENST00000406019 ELOAQ14241 798 aaKnown RBP9.2□□□□□ -0.94
HMGB1P13-201ENST00000406019 CDCA8Q53HL2 280 aa9.2□□□□□ -0.94
HMGB1P13-201ENST00000406019 RIPOR1Q6ZS17 1223 aa9.2□□□□□ -0.94
HMGB1P13-201ENST00000406019 C1orf216Q8TAB5 229 aa9.2□□□□□ -0.94
HMGB1P13-201ENST00000406019 KLRG1Q96E93 195 aa9.2□□□□□ -0.94
HMGB1P13-201ENST00000406019 ZDHHC3Q9NYG2 299 aa9.2□□□□□ -0.94
HMGB1P13-201ENST00000406019 PARP3Q9Y6F1 533 aa9.2□□□□□ -0.94
HMGB1P13-201ENST00000406019 TXLNAP40222 546 aa9.19□□□□□ -0.94
HMGB1P13-201ENST00000406019 FAM69CQ0P6D2 419 aa9.19□□□□□ -0.94
HMGB1P13-201ENST00000406019 LBRQ14739 615 aaKnown RBP9.19□□□□□ -0.94
HMGB1P13-201ENST00000406019 NUCKS1Q9H1E3 243 aaKnown RBP9.19□□□□□ -0.94
HMGB1P13-201ENST00000406019 RUBCNLQ9H714 662 aa9.19□□□□□ -0.94
HMGB1P13-201ENST00000406019 NDFIP2Q9NV92 336 aa9.19□□□□□ -0.94
HMGB1P13-201ENST00000406019 CABP1Q9NZU7 370 aa9.19□□□□□ -0.94
HMGB1P13-201ENST00000406019 HCN2Q9UL51 889 aa9.19□□□□□ -0.94
HMGB1P13-201ENST00000406019 H7C1W4 665 aa9.18□□□□□ -0.94
HMGB1P13-201ENST00000406019 ATG7O95352 703 aa9.18□□□□□ -0.94
HMGB1P13-201ENST00000406019 NOS2P35228 1153 aa9.18□□□□□ -0.94
HMGB1P13-201ENST00000406019 STAG2Q8N3U4 1231 aa9.18□□□□□ -0.94
HMGB1P13-201ENST00000406019 L3MBTL2Q969R5 705 aa9.18□□□□□ -0.94
HMGB1P13-201ENST00000406019 GTPBP3Q969Y2 492 aaKnown RBP9.18□□□□□ -0.94
HMGB1P13-201ENST00000406019 GPR25O00155 361 aa9.17□□□□□ -0.94
HMGB1P13-201ENST00000406019 PSMA6P60900 246 aaKnown RBP9.17□□□□□ -0.94
HMGB1P13-201ENST00000406019 CCDC97Q96F63 343 aaPredicted RBP9.17□□□□□ -0.94
HMGB1P13-201ENST00000406019 NOVA2Q9UNW9 492 aaKnown RBP9.17□□□□□ -0.94
HMGB1P13-201ENST00000406019 SLURP2P0DP57 97 aa9.16□□□□□ -0.94
HMGB1P13-201ENST00000406019 STK32AQ8WU08 396 aa9.16□□□□□ -0.94
HMGB1P13-201ENST00000406019 PBXIP1Q96AQ6 731 aa9.16□□□□□ -0.94
HMGB1P13-201ENST00000406019 CNTNAP3BQ96NU0 1288 aa9.16□□□□□ -0.94
HMGB1P13-201ENST00000406019 ZIC5Q96T25 663 aa9.16□□□□□ -0.94
HMGB1P13-201ENST00000406019 C2orf49Q9BVC5 232 aaPredicted RBP9.16□□□□□ -0.94
HMGB1P13-201ENST00000406019 CNTNAP3Q9BZ76 1288 aa9.16□□□□□ -0.94
HMGB1P13-201ENST00000406019 WEE1P30291 646 aa9.15□□□□□ -0.94
HMGB1P13-201ENST00000406019 SERTM1A2A2V5 107 aa9.14□□□□□ -0.95
HMGB1P13-201ENST00000406019 LGR5O75473 907 aa9.14□□□□□ -0.95
HMGB1P13-201ENST00000406019 NBPF1Q3BBV0 1214 aa9.14□□□□□ -0.95
HMGB1P13-201ENST00000406019 ATAD2Q6PL18 1390 aa9.13□□□□□ -0.95
HMGB1P13-201ENST00000406019 A0A1W2PNR3 127 aa9.13□□□□□ -0.95
HMGB1P13-201ENST00000406019 IGFBP4P22692 258 aa9.13□□□□□ -0.95
HMGB1P13-201ENST00000406019 NLRP8Q86W28 1048 aa9.13□□□□□ -0.95
HMGB1P13-201ENST00000406019 GAS2L2Q8NHY3 880 aa9.13□□□□□ -0.95
HMGB1P13-201ENST00000406019 SCG3Q8WXD2 468 aaKnown RBP9.13□□□□□ -0.95
HMGB1P13-201ENST00000406019 SLAIN2Q9P270 581 aa9.13□□□□□ -0.95
HMGB1P13-201ENST00000406019 ACIN1Q9UKV3 1341 aaKnown RBP9.12□□□□□ -0.95
HMGB1P13-201ENST00000406019 PPP1R12BO60237 982 aaPredicted RBP9.12□□□□□ -0.95
HMGB1P13-201ENST00000406019 INSM1Q01101 510 aaPredicted RBP9.12□□□□□ -0.95
HMGB1P13-201ENST00000406019 OCLNQ16625 522 aa9.12□□□□□ -0.95
HMGB1P13-201ENST00000406019 C1orf53Q5VUE5 145 aa9.12□□□□□ -0.95
HMGB1P13-201ENST00000406019 FAM200AQ8TCP9 573 aa9.12□□□□□ -0.95
HMGB1P13-201ENST00000406019 AIDAQ96BJ3 306 aa9.12□□□□□ -0.95
HMGB1P13-201ENST00000406019 CFHR5Q9BXR6 569 aa9.12□□□□□ -0.95
HMGB1P13-201ENST00000406019 RBM19Q9Y4C8 960 aaKnown RBP9.12□□□□□ -0.95
HMGB1P13-201ENST00000406019 BNIP3LO60238 219 aa9.11□□□□□ -0.95
HMGB1P13-201ENST00000406019 CSB-PGBD3P0DP91 1061 aa9.11□□□□□ -0.95
HMGB1P13-201ENST00000406019 TATP17735 454 aaPredicted RBP9.11□□□□□ -0.95
HMGB1P13-201ENST00000406019 SAMD5Q5TGI4 173 aa9.11□□□□□ -0.95
HMGB1P13-201ENST00000406019 TMEM164Q5U3C3 297 aa9.11□□□□□ -0.95
HMGB1P13-201ENST00000406019 PGBD3Q8N328 593 aa9.11□□□□□ -0.95
HMGB1P13-201ENST00000406019 ZCCHC2Q9C0B9 1178 aaKnown RBP9.11□□□□□ -0.95
HMGB1P13-201ENST00000406019 MBIPQ9NS73 344 aa9.11□□□□□ -0.95
HMGB1P13-201ENST00000406019 GPC6Q9Y625 555 aaPredicted RBP9.11□□□□□ -0.95
HMGB1P13-201ENST00000406019 SWI5Q1ZZU3 235 aa9.1□□□□□ -0.95
HMGB1P13-201ENST00000406019 EFHC2Q5JST6 749 aa9.1□□□□□ -0.95
HMGB1P13-201ENST00000406019 ZSCAN1Q8NBB4 408 aa9.1□□□□□ -0.95
HMGB1P13-201ENST00000406019 PHACTR1Q9C0D0 580 aa9.1□□□□□ -0.95
HMGB1P13-201ENST00000406019 ZNF232Q9UNY5 417 aa9.1□□□□□ -0.95
HMGB1P13-201ENST00000406019 EFSO43281 561 aa9.09□□□□□ -0.95
HMGB1P13-201ENST00000406019 SRSF11Q05519 484 aaKnown RBP9.09□□□□□ -0.95
HMGB1P13-201ENST00000406019 WHAMMQ8TF30 809 aa9.09□□□□□ -0.95
HMGB1P13-201ENST00000406019 ABHD17AQ96GS6 310 aa9.09□□□□□ -0.95
HMGB1P13-201ENST00000406019 ARID3AQ99856 593 aa9.09□□□□□ -0.95
HMGB1P13-201ENST00000406019 HINFPQ9BQA5 517 aa9.09□□□□□ -0.95
HMGB1P13-201ENST00000406019 ATXN7L1Q9ULK2 861 aaPredicted RBP9.09□□□□□ -0.95
HMGB1P13-201ENST00000406019 C2CD2LO14523 706 aa9.08□□□□□ -0.96
HMGB1P13-201ENST00000406019 ADAMTS2O95450 1211 aa9.08□□□□□ -0.96
HMGB1P13-201ENST00000406019 FAM157BP0CG42 384 aa9.08□□□□□ -0.96
HMGB1P13-201ENST00000406019 TNP2Q05952 138 aa9.08□□□□□ -0.96
HMGB1P13-201ENST00000406019 ZNF385CQ66K41 422 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms