RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 HRH3Q9Y5N1 445 aa4.37□□□□□ -1.71
CBX3P9-201ENST00000402326 CDK2AP1O14519 115 aa4.36□□□□□ -1.71
CBX3P9-201ENST00000402326 BMP1P13497 986 aa4.36□□□□□ -1.71
CBX3P9-201ENST00000402326 GTF2E1P29083 439 aaPredicted RBP4.36□□□□□ -1.71
CBX3P9-201ENST00000402326 GPC1P35052 558 aa4.36□□□□□ -1.71
CBX3P9-201ENST00000402326 RNF144AP50876 292 aaPredicted RBP4.36□□□□□ -1.71
CBX3P9-201ENST00000402326 MTFR1Q15390 333 aa4.36□□□□□ -1.71
CBX3P9-201ENST00000402326 SLC27A3Q5K4L6 730 aa4.36□□□□□ -1.71
CBX3P9-201ENST00000402326 B4GALNT3Q6L9W6 998 aa4.36□□□□□ -1.71
CBX3P9-201ENST00000402326 TRIM46Q7Z4K8 759 aa4.36□□□□□ -1.71
CBX3P9-201ENST00000402326 TRIM47Q96LD4 638 aa4.36□□□□□ -1.71
CBX3P9-201ENST00000402326 PURBQ96QR8 312 aaKnown RBP4.36□□□□□ -1.71
CBX3P9-201ENST00000402326 POLMQ9NP87 494 aaPredicted RBP4.36□□□□□ -1.71
CBX3P9-201ENST00000402326 PRMT3O60678 531 aa4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 LGR5O75473 907 aa4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 CTSOP43234 321 aaPredicted RBP4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 EPHA4P54764 986 aa4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 TMEM214Q6NUQ4 689 aaKnown RBP4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 NBPF15Q8N660 670 aa4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 GAS2L2Q8NHY3 880 aa4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 ZFP42Q96MM3 310 aa4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 ZSCAN10Q96SZ4 725 aaPredicted RBP4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 FHDC1Q9C0D6 1143 aaPredicted RBP4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 GRIP2Q9C0E4 1043 aa4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 ATP13A2Q9NQ11 1180 aa4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 SCHIP1Q9P0W5 487 aaPredicted RBP4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 ATAD2Q6PL18 1390 aa4.35□□□□□ -1.71
CBX3P9-201ENST00000402326 TTLL8A6PVC2 850 aa4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 K7ELQ4 463 aaPredicted RBP4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 MSTNO14793 375 aa4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 BRD1O95696 1058 aa4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 IGFBP4P22692 258 aa4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 ATP2B4P23634 1241 aa4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 SSFA2P28290 1259 aa4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 WEE1P30291 646 aa4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 PPARGC1BQ86YN6 1023 aaKnown RBP4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 SLC9A9Q8IVB4 645 aa4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 SCG3Q8WXD2 468 aaKnown RBP4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 PRIMPOLQ96LW4 560 aa4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 GZF1Q9H116 711 aaPredicted RBP4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 TSPAN10Q9H1Z9 355 aaPredicted RBP4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 SLAIN2Q9P270 581 aa4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 CHMP3Q9Y3E7 222 aa4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 SOS2Q07890 1332 aaPredicted RBP4.34□□□□□ -1.71
CBX3P9-201ENST00000402326 FOXO3O43524 673 aa4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 PPP1R12BO60237 982 aaPredicted RBP4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 OCLNQ16625 522 aa4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 GNASQ5JWF2 1037 aa4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 TBCELQ5QJ74 424 aa4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 FOXD4L5Q5VV16 416 aaPredicted RBP4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 LYSMD3Q7Z3D4 306 aa4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 PRICKLE2Q7Z3G6 844 aa4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 STAG2Q8N3U4 1231 aa4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 C1orf216Q8TAB5 229 aa4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 RNF217Q8TC41 542 aa4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 RHBDD1Q8TEB9 315 aa4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 CHMP7Q8WUX9 453 aaPredicted RBP4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 NIFKQ9BYG3 293 aaKnown RBP4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 CABP1Q9NZU7 370 aa4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 CXXC1Q9P0U4 656 aaPredicted RBP4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 IQSEC3Q9UPP2 1182 aaPredicted RBP4.33□□□□□ -1.72
CBX3P9-201ENST00000402326 SERTM1A2A2V5 107 aa4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 FIGNL2A6NMB9 653 aa4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 SPATA31C2B4DYI2 1134 aa4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 PATL2C9JE40 543 aaKnown RBP4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 C21orf2O43822 256 aa4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 PSMA6P60900 246 aaKnown RBP4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 POU4F2Q12837 409 aa4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 TEAD4Q15561 434 aa4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 WDR44Q5JSH3 913 aa4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 TAS1R3Q7RTX0 852 aa4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 KIFC2Q96AC6 838 aa4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 VTI1AQ96AJ9 217 aa4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 USP3Q9Y6I4 520 aa4.32□□□□□ -1.72
CBX3P9-201ENST00000402326 MAN1A2O60476 641 aa4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 PTCD1O75127 700 aaKnown RBP4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 ARID4AP29374 1257 aaPredicted RBP4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 NOS2P35228 1153 aa4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 IRS1P35568 1242 aa4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 KCNA1Q09470 495 aa4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 FKBP5Q13451 457 aaPredicted RBP4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 C4orf17Q53FE4 359 aa4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 PHLDB3Q6NSJ2 640 aa4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 NBPF10Q6P3W6 841 aaKnown RBP4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 L3MBTL2Q969R5 705 aa4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 C2orf49Q9BVC5 232 aaPredicted RBP4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 ZNF232Q9UNY5 417 aa4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 MTMR7Q9Y216 660 aa4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 CCDC9Q9Y3X0 531 aaKnown RBP4.31□□□□□ -1.72
CBX3P9-201ENST00000402326 PHKA2P46019 1235 aa4.3□□□□□ -1.72
CBX3P9-201ENST00000402326 VEGFBP49765 207 aa4.3□□□□□ -1.72
CBX3P9-201ENST00000402326 ZNF295-AS1Q8N0V1 137 aa4.3□□□□□ -1.72
CBX3P9-201ENST00000402326 ZDHHC1Q8WTX9 485 aa4.3□□□□□ -1.72
CBX3P9-201ENST00000402326 COL26A1Q96A83 441 aa4.3□□□□□ -1.72
CBX3P9-201ENST00000402326 AIDAQ96BJ3 306 aa4.3□□□□□ -1.72
CBX3P9-201ENST00000402326 DNMT3LQ9UJW3 386 aa4.3□□□□□ -1.72
CBX3P9-201ENST00000402326 PARP3Q9Y6F1 533 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms