RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 IBSPP21815 317 aaPredicted RBP17.53■□□□□ 0.4
ITSN1-210ENST00000399353 LEKR1Q6ZMV7 388 aa17.53■□□□□ 0.4
ITSN1-210ENST00000399353 LOC102724159A0A0B4J2E5 919 aa17.53■□□□□ 0.4
ITSN1-210ENST00000399353 PWP2Q15269 919 aaKnown RBP17.53■□□□□ 0.4
ITSN1-210ENST00000399353 SDF4Q9BRK5 362 aa17.53■□□□□ 0.4
ITSN1-210ENST00000399353 AK7Q96M32 723 aa17.52■□□□□ 0.4
ITSN1-210ENST00000399353 ZSCAN26Q16670 478 aa17.52■□□□□ 0.4
ITSN1-210ENST00000399353 LMOD2Q6P5Q4 547 aa17.52■□□□□ 0.4
ITSN1-210ENST00000399353 SECISBP2LQ93073 1101 aaKnown RBP17.52■□□□□ 0.4
ITSN1-210ENST00000399353 DDX11Q96FC9 970 aa17.52■□□□□ 0.4
ITSN1-210ENST00000399353 CCDC9Q9Y3X0 531 aaKnown RBP17.52■□□□□ 0.4
ITSN1-210ENST00000399353 EIF2S2P20042 333 aaKnown RBP17.52■□□□□ 0.39
ITSN1-210ENST00000399353 CCDC144BQ3MJ40 725 aa17.52■□□□□ 0.39
ITSN1-210ENST00000399353 CCDC144CPQ8IYA2 1237 aa17.52■□□□□ 0.39
ITSN1-210ENST00000399353 PDRG1Q9NUG6 133 aa17.52■□□□□ 0.39
ITSN1-210ENST00000399353 KIAA0556O60303 1618 aa17.51■□□□□ 0.39
ITSN1-210ENST00000399353 SURF6O75683 361 aaKnown RBP17.51■□□□□ 0.39
ITSN1-210ENST00000399353 TTLL5Q6EMB2 1281 aa17.51■□□□□ 0.39
ITSN1-210ENST00000399353 PRPF40BQ6NWY9 871 aaKnown RBP17.51■□□□□ 0.39
ITSN1-210ENST00000399353 SYCP2Q9BX26 1530 aa17.51■□□□□ 0.39
ITSN1-210ENST00000399353 RBM6P78332 1123 aaKnown RBP17.51■□□□□ 0.39
ITSN1-210ENST00000399353 NOM1Q5C9Z4 860 aaKnown RBP17.51■□□□□ 0.39
ITSN1-210ENST00000399353 EMILIN1Q9Y6C2 1016 aa17.51■□□□□ 0.39
ITSN1-210ENST00000399353 ADGRL2O95490 1459 aa17.51■□□□□ 0.39
ITSN1-210ENST00000399353 CHMLP26374 656 aa17.51■□□□□ 0.39
ITSN1-210ENST00000399353 EPC1Q9H2F5 836 aa17.51■□□□□ 0.39
ITSN1-210ENST00000399353 PHACTR2O75167 634 aa17.5■□□□□ 0.39
ITSN1-210ENST00000399353 DEF6Q9H4E7 631 aa17.5■□□□□ 0.39
ITSN1-210ENST00000399353 MRVI1Q9Y6F6 885 aa17.5■□□□□ 0.39
ITSN1-210ENST00000399353 KDM5DQ9BY66 1539 aa17.5■□□□□ 0.39
ITSN1-210ENST00000399353 PLA2R1Q13018 1463 aa17.5■□□□□ 0.39
ITSN1-210ENST00000399353 CUL4AQ13619 759 aa17.5■□□□□ 0.39
ITSN1-210ENST00000399353 E2F4Q16254 413 aa17.5■□□□□ 0.39
ITSN1-210ENST00000399353 TXLNBQ8N3L3 684 aa17.5■□□□□ 0.39
ITSN1-210ENST00000399353 CDK19Q9BWU1 502 aa17.5■□□□□ 0.39
ITSN1-210ENST00000399353 TSPYL4Q9UJ04 414 aa17.5■□□□□ 0.39
ITSN1-210ENST00000399353 MCM6Q14566 821 aa17.49■□□□□ 0.39
ITSN1-210ENST00000399353 NFE2L2Q16236 605 aa17.49■□□□□ 0.39
ITSN1-210ENST00000399353 ISM2Q6H9L7 571 aa17.49■□□□□ 0.39
ITSN1-210ENST00000399353 SULT6B1Q6IMI4 303 aa17.49■□□□□ 0.39
ITSN1-210ENST00000399353 ITSN2Q9NZM3 1697 aa17.49■□□□□ 0.39
ITSN1-210ENST00000399353 UNC5CLQ8IV45 518 aa17.49■□□□□ 0.39
ITSN1-210ENST00000399353 CCDC171Q6TFL3 1326 aa17.49■□□□□ 0.39
ITSN1-210ENST00000399353 NOS1P29475 1434 aa17.49■□□□□ 0.39
ITSN1-210ENST00000399353 ZKSCAN1P17029 563 aaPredicted RBP17.48■□□□□ 0.39
ITSN1-210ENST00000399353 CLCN6P51797 869 aa17.48■□□□□ 0.39
ITSN1-210ENST00000399353 ST5P78524 1137 aa17.48■□□□□ 0.39
ITSN1-210ENST00000399353 MCM10Q7L590 875 aa17.48■□□□□ 0.39
ITSN1-210ENST00000399353 TMC6Q7Z403 805 aa17.48■□□□□ 0.39
ITSN1-210ENST00000399353 TTC6Q86TZ1 520 aa17.48■□□□□ 0.39
ITSN1-210ENST00000399353 BIN1O00499 593 aa17.48■□□□□ 0.39
ITSN1-210ENST00000399353 OAS2P29728 719 aaKnown RBP17.48■□□□□ 0.39
ITSN1-210ENST00000399353 CYP46A1Q9Y6A2 500 aa17.48■□□□□ 0.39
ITSN1-210ENST00000399353 FCHSD2O94868 740 aa17.47■□□□□ 0.39
ITSN1-210ENST00000399353 CCDC73Q6ZRK6 1079 aa17.47■□□□□ 0.39
ITSN1-210ENST00000399353 PDILTQ8N807 584 aa17.47■□□□□ 0.39
ITSN1-210ENST00000399353 ARHGAP45Q92619 1136 aa17.47■□□□□ 0.39
ITSN1-210ENST00000399353 GNAI2P04899 355 aa17.47■□□□□ 0.39
ITSN1-210ENST00000399353 SF3A1Q15459 793 aaKnown RBP17.47■□□□□ 0.39
ITSN1-210ENST00000399353 MYO1CO00159 1063 aa17.47■□□□□ 0.39
ITSN1-210ENST00000399353 SFPQP23246 707 aaKnown RBP eCLIP17.47■□□□□ 0.39
ITSN1-210ENST00000399353 AMPHP49418 695 aa17.47■□□□□ 0.39
ITSN1-210ENST00000399353 SART3Q15020 963 aaKnown RBP17.47■□□□□ 0.39
ITSN1-210ENST00000399353 LRRC8AQ8IWT6 810 aa17.47■□□□□ 0.39
ITSN1-210ENST00000399353 IL16Q14005 1332 aa17.46■□□□□ 0.39
ITSN1-210ENST00000399353 KINO60870 393 aaKnown RBP17.46■□□□□ 0.39
ITSN1-210ENST00000399353 E9PCH4 1651 aa17.46■□□□□ 0.39
ITSN1-210ENST00000399353 PNMA6AP0CW24 399 aaPredicted RBP17.46■□□□□ 0.39
ITSN1-210ENST00000399353 CARD6Q9BX69 1037 aa17.46■□□□□ 0.39
ITSN1-210ENST00000399353 RAD50Q92878 1312 aa17.45■□□□□ 0.38
ITSN1-210ENST00000399353 PLEKHF1Q96S99 279 aa17.45■□□□□ 0.38
ITSN1-210ENST00000399353 SMARCE1Q969G3 411 aa17.45■□□□□ 0.38
ITSN1-210ENST00000399353 LARGE1O95461 756 aa17.45■□□□□ 0.38
ITSN1-210ENST00000399353 CYP2C19P33261 490 aa17.44■□□□□ 0.38
ITSN1-210ENST00000399353 CCDC102AQ96A19 550 aa17.44■□□□□ 0.38
ITSN1-210ENST00000399353 NR1I2O75469 434 aa17.44■□□□□ 0.38
ITSN1-210ENST00000399353 WAPLQ7Z5K2 1190 aa17.44■□□□□ 0.38
ITSN1-210ENST00000399353 RASEFQ8IZ41 740 aa17.44■□□□□ 0.38
ITSN1-210ENST00000399353 AOPEPQ8N6M6 819 aa17.44■□□□□ 0.38
ITSN1-210ENST00000399353 VIRMAQ69YN4 1812 aaKnown RBP17.44■□□□□ 0.38
ITSN1-210ENST00000399353 HSP90AA4PQ58FG1 418 aa17.44■□□□□ 0.38
ITSN1-210ENST00000399353 HDAC5Q9UQL6 1122 aa17.44■□□□□ 0.38
ITSN1-210ENST00000399353 NUP160Q12769 1436 aa17.44■□□□□ 0.38
ITSN1-210ENST00000399353 FYB1O15117 783 aa17.43■□□□□ 0.38
ITSN1-210ENST00000399353 CDC37L1Q7L3B6 337 aa17.43■□□□□ 0.38
ITSN1-210ENST00000399353 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
ITSN1-210ENST00000399353 ME1P48163 572 aa17.43■□□□□ 0.38
ITSN1-210ENST00000399353 PTPN21Q16825 1174 aa17.43■□□□□ 0.38
ITSN1-210ENST00000399353 VPS18Q9P253 973 aa17.43■□□□□ 0.38
ITSN1-210ENST00000399353 MTMR6Q9Y217 621 aa17.43■□□□□ 0.38
ITSN1-210ENST00000399353 PRDM15P57071 1507 aaPredicted RBP17.43■□□□□ 0.38
ITSN1-210ENST00000399353 ANAPC15P60006 121 aa17.43■□□□□ 0.38
ITSN1-210ENST00000399353 GUCY1B3Q02153 619 aa17.43■□□□□ 0.38
ITSN1-210ENST00000399353 RNF20Q5VTR2 975 aa17.43■□□□□ 0.38
ITSN1-210ENST00000399353 RUFY3Q7L099 469 aa17.43■□□□□ 0.38
ITSN1-210ENST00000399353 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
ITSN1-210ENST00000399353 RAB11FIP3O75154 756 aa17.42■□□□□ 0.38
ITSN1-210ENST00000399353 DHX37Q8IY37 1157 aaKnown RBP17.42■□□□□ 0.38
ITSN1-210ENST00000399353 LRRN4CLQ8ND94 238 aa17.42■□□□□ 0.38
ITSN1-210ENST00000399353 SIL1Q9H173 461 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms