RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 TRERF1Q96PN7 1200 aa4.93□□□□□ -1.62
RPS4XP3-201ENST00000398541 MBIPQ9NS73 344 aa4.93□□□□□ -1.62
RPS4XP3-201ENST00000398541 SERTAD1Q9UHV2 236 aa4.93□□□□□ -1.62
RPS4XP3-201ENST00000398541 NOD1Q9Y239 953 aa4.93□□□□□ -1.62
RPS4XP3-201ENST00000398541 THBS1P07996 1170 aa4.92□□□□□ -1.62
RPS4XP3-201ENST00000398541 MSX1P28360 303 aa4.92□□□□□ -1.62
RPS4XP3-201ENST00000398541 PLA2G4AP47712 749 aa4.92□□□□□ -1.62
RPS4XP3-201ENST00000398541 GTF2IP78347 998 aa4.92□□□□□ -1.62
RPS4XP3-201ENST00000398541 PSME1Q06323 249 aa4.92□□□□□ -1.62
RPS4XP3-201ENST00000398541 CFAP70Q5T0N1 1121 aa4.92□□□□□ -1.62
RPS4XP3-201ENST00000398541 PGBD3Q8N328 593 aa4.92□□□□□ -1.62
RPS4XP3-201ENST00000398541 SLC4A9Q96Q91 983 aa4.92□□□□□ -1.62
RPS4XP3-201ENST00000398541 RUBCNLQ9H714 662 aa4.92□□□□□ -1.62
RPS4XP3-201ENST00000398541 ADAMTS8Q9UP79 889 aa4.92□□□□□ -1.62
RPS4XP3-201ENST00000398541 A6NJY4 79 aa4.91□□□□□ -1.62
RPS4XP3-201ENST00000398541 MX2P20592 715 aa4.91□□□□□ -1.62
RPS4XP3-201ENST00000398541 LYPD4Q6UWN0 246 aa4.91□□□□□ -1.62
RPS4XP3-201ENST00000398541 TBC1D9Q6ZT07 1266 aa4.91□□□□□ -1.62
RPS4XP3-201ENST00000398541 UCN2Q96RP3 112 aa4.91□□□□□ -1.62
RPS4XP3-201ENST00000398541 NIFKQ9BYG3 293 aaKnown RBP4.91□□□□□ -1.62
RPS4XP3-201ENST00000398541 VRTNQ9H8Y1 702 aa4.91□□□□□ -1.62
RPS4XP3-201ENST00000398541 GNEQ9Y223 722 aaKnown RBP4.91□□□□□ -1.62
RPS4XP3-201ENST00000398541 IGF1RP08069 1367 aa4.91□□□□□ -1.62
RPS4XP3-201ENST00000398541 CARNS1A5YM72 827 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 USP17L3A6NCW0 530 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 USP17L4A6NCW7 530 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 CDK2AP1O14519 115 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 BACH1O14867 736 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 ARHGEF15O94989 841 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 CELA2BP08218 269 aaPredicted RBP4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 RFX1P22670 979 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 MAP3K10Q02779 954 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 LBRQ14739 615 aaKnown RBP4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 MTFR1Q15390 333 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 EFHC2Q5JST6 749 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 USP17L2Q6R6M4 530 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 USP17L1Q7RTZ2 530 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 AIDAQ96BJ3 306 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 CFHR5Q9BXR6 569 aa4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 IQSEC3Q9UPP2 1182 aaPredicted RBP4.9□□□□□ -1.63
RPS4XP3-201ENST00000398541 ATP9BO43861 1147 aa4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 ATP4AP20648 1035 aa4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 CANXP27824 592 aaKnown RBP4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 UBAP2LQ14157 1087 aaKnown RBP4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 TRIM50Q86XT4 487 aa4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 PLEKHM2Q8IWE5 1019 aa4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 ZNF295-AS1Q8N0V1 137 aa4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 C1orf216Q8TAB5 229 aa4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 CRISPLD1Q9H336 500 aa4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 ZNF358Q9NW07 568 aa4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 KIAA1522Q9P206 1035 aaPredicted RBP4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 NSFL1CQ9UNZ2 370 aaKnown RBP4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 PHF24Q9UPV7 400 aa4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 USP3Q9Y6I4 520 aa4.89□□□□□ -1.63
RPS4XP3-201ENST00000398541 TMEM88BA6NKF7 163 aa4.88□□□□□ -1.63
RPS4XP3-201ENST00000398541 KCNMA1Q12791 1236 aa4.88□□□□□ -1.63
RPS4XP3-201ENST00000398541 NBPF1Q3BBV0 1214 aa4.88□□□□□ -1.63
RPS4XP3-201ENST00000398541 B4GALNT3Q6L9W6 998 aa4.88□□□□□ -1.63
RPS4XP3-201ENST00000398541 TPCN2Q8NHX9 752 aa4.88□□□□□ -1.63
RPS4XP3-201ENST00000398541 ACDQ96AP0 544 aa4.88□□□□□ -1.63
RPS4XP3-201ENST00000398541 PPP1R12CQ9BZL4 782 aa4.88□□□□□ -1.63
RPS4XP3-201ENST00000398541 CABP1Q9NZU7 370 aa4.88□□□□□ -1.63
RPS4XP3-201ENST00000398541 SCHIP1Q9P0W5 487 aaPredicted RBP4.88□□□□□ -1.63
RPS4XP3-201ENST00000398541 RNF225M0QZC1 329 aaPredicted RBP4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 ZBTB7BO15156 539 aaPredicted RBP4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 BCRP11274 1271 aa4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 ERCC3P19447 782 aa4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 MAP2K3P46734 347 aa4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 ATP1A2P50993 1020 aa4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 MARSP56192 900 aaKnown RBP4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 CLDN10P78369 228 aa4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 ARSJQ5FYB0 599 aaPredicted RBP4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 CCDC102BQ68D86 513 aa4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 TXNDC2Q86VQ3 553 aa4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 MRRFQ96E11 262 aaKnown RBP4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 ABHD17AQ96GS6 310 aa4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 ENAMQ9NRM1 1142 aa4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 MKRN1Q9UHC7 482 aaKnown RBP4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 ATXN7L1Q9ULK2 861 aaPredicted RBP4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 KIAA1024Q9UPX6 916 aa4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 PARP3Q9Y6F1 533 aa4.87□□□□□ -1.63
RPS4XP3-201ENST00000398541 A0A1W2PNR3 127 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 BNIP3LO60238 219 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 ATG7O95352 703 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 TATP17735 454 aaPredicted RBP4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 GSK3AP49840 483 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 EPHA4P54764 986 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 FOXK2Q01167 660 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 TBCELQ5QJ74 424 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 FIGNL1Q6PIW4 674 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 NLRP8Q86W28 1048 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 SLC9A9Q8IVB4 645 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 TNS4Q8IZW8 715 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 OGFOD1Q8N543 542 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 OXCT2Q9BYC2 517 aaPredicted RBP4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 ZCCHC2Q9C0B9 1178 aaKnown RBP4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 NDFIP2Q9NV92 336 aa4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 DNAAF2Q9NVR5 837 aaKnown RBP4.86□□□□□ -1.63
RPS4XP3-201ENST00000398541 ZDHHC3Q9NYG2 299 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms