RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 ATAD2Q6PL18 1390 aa13.81□□□□□ -0.2
PUM3-202ENST00000397885 FOXO3O43524 673 aa13.8□□□□□ -0.2
PUM3-202ENST00000397885 CTR9Q6PD62 1173 aa13.8□□□□□ -0.2
PUM3-202ENST00000397885 TMEM87AQ8NBN3 555 aa13.8□□□□□ -0.2
PUM3-202ENST00000397885 KCNF1Q9H3M0 494 aa13.8□□□□□ -0.2
PUM3-202ENST00000397885 RGPD8O14715 1765 aaPredicted RBP13.8□□□□□ -0.2
PUM3-202ENST00000397885 CYP2C19P33261 490 aa13.8□□□□□ -0.2
PUM3-202ENST00000397885 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
PUM3-202ENST00000397885 SECISBP2LQ93073 1101 aaKnown RBP13.8□□□□□ -0.2
PUM3-202ENST00000397885 PYCARDQ9ULZ3 195 aa13.8□□□□□ -0.2
PUM3-202ENST00000397885 ANKARQ7Z5J8 1434 aa13.79□□□□□ -0.2
PUM3-202ENST00000397885 INTS3Q68E01 1043 aaKnown RBP13.79□□□□□ -0.2
PUM3-202ENST00000397885 SSH1Q8WYL5 1049 aa13.79□□□□□ -0.2
PUM3-202ENST00000397885 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
PUM3-202ENST00000397885 U2AF1L5P0DN76 240 aaPredicted RBP13.79□□□□□ -0.2
PUM3-202ENST00000397885 BRD2P25440 801 aaKnown RBP13.79□□□□□ -0.2
PUM3-202ENST00000397885 U2AF1Q01081 240 aaKnown RBP eCLIP13.79□□□□□ -0.2
PUM3-202ENST00000397885 NOB1Q9ULX3 412 aaKnown RBP13.79□□□□□ -0.2
PUM3-202ENST00000397885 PHF8Q9UPP1 1060 aa13.79□□□□□ -0.2
PUM3-202ENST00000397885 AFF2P51816 1311 aa13.78□□□□□ -0.2
PUM3-202ENST00000397885 IL16Q14005 1332 aa13.78□□□□□ -0.2
PUM3-202ENST00000397885 REC8O95072 547 aa13.78□□□□□ -0.2
PUM3-202ENST00000397885 MX1P20591 662 aa13.78□□□□□ -0.2
PUM3-202ENST00000397885 CCDC112Q8NEF3 446 aa13.78□□□□□ -0.2
PUM3-202ENST00000397885 PPIP5K1Q6PFW1 1433 aa13.78□□□□□ -0.2
PUM3-202ENST00000397885 ARHGEF28Q8N1W1 1705 aaKnown RBP13.78□□□□□ -0.2
PUM3-202ENST00000397885 BRPF1P55201 1214 aaPredicted RBP13.78□□□□□ -0.2
PUM3-202ENST00000397885 PSME1Q06323 249 aa13.78□□□□□ -0.2
PUM3-202ENST00000397885 KIF1BPQ96EK5 621 aa13.78□□□□□ -0.2
PUM3-202ENST00000397885 CHMP4AQ9BY43 222 aa13.78□□□□□ -0.2
PUM3-202ENST00000397885 ALDH1L2Q3SY69 923 aa13.77□□□□□ -0.21
PUM3-202ENST00000397885 KRT28Q7Z3Y7 464 aa13.77□□□□□ -0.21
PUM3-202ENST00000397885 CUL4AQ13619 759 aa13.76□□□□□ -0.21
PUM3-202ENST00000397885 RNF20Q5VTR2 975 aa13.76□□□□□ -0.21
PUM3-202ENST00000397885 CASC1Q6TDU7 716 aa13.76□□□□□ -0.21
PUM3-202ENST00000397885 C8orf37Q96NL8 207 aa13.76□□□□□ -0.21
PUM3-202ENST00000397885 TULP4Q9NRJ4 1543 aa13.76□□□□□ -0.21
PUM3-202ENST00000397885 MUM1L1Q5H9M0 696 aa13.76□□□□□ -0.21
PUM3-202ENST00000397885 MINK1Q8N4C8 1332 aaPredicted RBP13.76□□□□□ -0.21
PUM3-202ENST00000397885 ADAMTS2O95450 1211 aa13.75□□□□□ -0.21
PUM3-202ENST00000397885 RXRBP28702 533 aa13.75□□□□□ -0.21
PUM3-202ENST00000397885 EXOSC9Q06265 439 aaKnown RBP13.75□□□□□ -0.21
PUM3-202ENST00000397885 MPNDQ8N594 471 aa13.75□□□□□ -0.21
PUM3-202ENST00000397885 ZNF428Q96B54 188 aa13.75□□□□□ -0.21
PUM3-202ENST00000397885 NGLY1Q96IV0 654 aa13.75□□□□□ -0.21
PUM3-202ENST00000397885 SPATA31A3Q5VYP0 1347 aa13.75□□□□□ -0.21
PUM3-202ENST00000397885 WASLO00401 505 aaPredicted RBP13.75□□□□□ -0.21
PUM3-202ENST00000397885 HCLS1P14317 486 aaPredicted RBP13.75□□□□□ -0.21
PUM3-202ENST00000397885 AXDND1Q5T1B0 1012 aaPredicted RBP13.75□□□□□ -0.21
PUM3-202ENST00000397885 MARF1Q9Y4F3 1742 aaKnown RBP13.74□□□□□ -0.21
PUM3-202ENST00000397885 CLGNO14967 610 aa13.74□□□□□ -0.21
PUM3-202ENST00000397885 GSPT1P15170 499 aaKnown RBP13.74□□□□□ -0.21
PUM3-202ENST00000397885 HNRNPH2P55795 449 aaKnown RBP13.74□□□□□ -0.21
PUM3-202ENST00000397885 NOL10Q9BSC4 688 aaKnown RBP13.74□□□□□ -0.21
PUM3-202ENST00000397885 FUCA2Q9BTY2 467 aa13.74□□□□□ -0.21
PUM3-202ENST00000397885 RAD50Q92878 1312 aa13.74□□□□□ -0.21
PUM3-202ENST00000397885 ERICH4A6NGS2 130 aa13.74□□□□□ -0.21
PUM3-202ENST00000397885 TNNT1P13805 278 aa13.74□□□□□ -0.21
PUM3-202ENST00000397885 TNNT3P45378 269 aaPredicted RBP13.74□□□□□ -0.21
PUM3-202ENST00000397885 RAD51AP2Q09MP3 1159 aa13.74□□□□□ -0.21
PUM3-202ENST00000397885 KMT5BQ4FZB7 885 aa13.74□□□□□ -0.21
PUM3-202ENST00000397885 CDK12Q9NYV4 1490 aaPredicted RBP13.73□□□□□ -0.21
PUM3-202ENST00000397885 ZBTB7BO15156 539 aaPredicted RBP13.73□□□□□ -0.21
PUM3-202ENST00000397885 BMS1Q14692 1282 aaKnown RBP13.73□□□□□ -0.21
PUM3-202ENST00000397885 TTC22Q5TAA0 569 aa13.73□□□□□ -0.21
PUM3-202ENST00000397885 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
PUM3-202ENST00000397885 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.73□□□□□ -0.21
PUM3-202ENST00000397885 SBNO1A3KN83 1393 aa13.73□□□□□ -0.21
PUM3-202ENST00000397885 USP48Q86UV5 1035 aa13.73□□□□□ -0.21
PUM3-202ENST00000397885 TMX3Q96JJ7 454 aa13.73□□□□□ -0.21
PUM3-202ENST00000397885 RASSF4Q9H2L5 321 aa13.73□□□□□ -0.21
PUM3-202ENST00000397885 QTRT2Q9H974 415 aaKnown RBP13.73□□□□□ -0.21
PUM3-202ENST00000397885 WDR33Q9C0J8 1336 aaKnown RBP13.73□□□□□ -0.21
PUM3-202ENST00000397885 PLEKHM2Q8IWE5 1019 aa13.72□□□□□ -0.21
PUM3-202ENST00000397885 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.72□□□□□ -0.21
PUM3-202ENST00000397885 UBE2HP62256 183 aa13.72□□□□□ -0.21
PUM3-202ENST00000397885 RBM6P78332 1123 aaKnown RBP13.72□□□□□ -0.21
PUM3-202ENST00000397885 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
PUM3-202ENST00000397885 TXLNBQ8N3L3 684 aa13.72□□□□□ -0.21
PUM3-202ENST00000397885 ARHGAP45Q92619 1136 aa13.72□□□□□ -0.21
PUM3-202ENST00000397885 ERO1AQ96HE7 468 aa13.72□□□□□ -0.21
PUM3-202ENST00000397885 TNS3Q68CZ2 1445 aa13.71□□□□□ -0.21
PUM3-202ENST00000397885 ITSN1Q15811 1721 aa13.71□□□□□ -0.21
PUM3-202ENST00000397885 ANKRD26Q9UPS8 1709 aa13.71□□□□□ -0.21
PUM3-202ENST00000397885 NOP2P46087 812 aaKnown RBP13.71□□□□□ -0.21
PUM3-202ENST00000397885 FNBP4Q8N3X1 1017 aaPredicted RBP13.71□□□□□ -0.21
PUM3-202ENST00000397885 CHAMP1Q96JM3 812 aa13.71□□□□□ -0.21
PUM3-202ENST00000397885 BRMS1Q9HCU9 246 aa13.71□□□□□ -0.21
PUM3-202ENST00000397885 GADD45BO75293 160 aaPredicted RBP13.7□□□□□ -0.22
PUM3-202ENST00000397885 USP21Q9UK80 565 aa13.7□□□□□ -0.22
PUM3-202ENST00000397885 ARHGEF10O15013 1369 aa13.7□□□□□ -0.22
PUM3-202ENST00000397885 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
PUM3-202ENST00000397885 HTATSF1O43719 755 aaKnown RBP13.7□□□□□ -0.22
PUM3-202ENST00000397885 TMPOP42166 694 aaKnown RBP13.7□□□□□ -0.22
PUM3-202ENST00000397885 PSEN1P49768 467 aa13.7□□□□□ -0.22
PUM3-202ENST00000397885 TEX35Q5T0J7 233 aa13.7□□□□□ -0.22
PUM3-202ENST00000397885 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.7□□□□□ -0.22
PUM3-202ENST00000397885 TSR2Q969E8 191 aaKnown RBP13.7□□□□□ -0.22
PUM3-202ENST00000397885 A0A1W2PP64 1363 aa13.69□□□□□ -0.22
PUM3-202ENST00000397885 PRR36Q9H6K5 1346 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms