RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 HOXB7P09629 217 aa22.43■■□□□ 1.18
CHRFAM7A-202ENST00000397827 PKP1Q13835 747 aa22.43■■□□□ 1.18
CHRFAM7A-202ENST00000397827 ZGPATQ8N5A5 531 aaKnown RBP22.43■■□□□ 1.18
CHRFAM7A-202ENST00000397827 STAP2Q9UGK3 403 aa22.43■■□□□ 1.18
CHRFAM7A-202ENST00000397827 CHMLP26374 656 aa22.42■■□□□ 1.18
CHRFAM7A-202ENST00000397827 AMOTQ4VCS5 1084 aa22.42■■□□□ 1.18
CHRFAM7A-202ENST00000397827 PRAMEF22A3QJZ6 481 aa22.42■■□□□ 1.18
CHRFAM7A-202ENST00000397827 TUBGCP6Q96RT7 1819 aa22.41■■□□□ 1.18
CHRFAM7A-202ENST00000397827 MAP4K4O95819 1239 aaPredicted RBP22.41■■□□□ 1.18
CHRFAM7A-202ENST00000397827 KRT28Q7Z3Y7 464 aa22.41■■□□□ 1.18
CHRFAM7A-202ENST00000397827 ANO2Q9NQ90 1003 aa22.41■■□□□ 1.18
CHRFAM7A-202ENST00000397827 LMO7Q8WWI1 1683 aa22.4■■□□□ 1.18
CHRFAM7A-202ENST00000397827 POLA2Q14181 598 aa22.4■■□□□ 1.18
CHRFAM7A-202ENST00000397827 NEK4P51957 841 aa22.4■■□□□ 1.18
CHRFAM7A-202ENST00000397827 PROSER3Q2NL68 480 aa22.4■■□□□ 1.18
CHRFAM7A-202ENST00000397827 PROSER2Q86WR7 435 aaPredicted RBP22.4■■□□□ 1.18
CHRFAM7A-202ENST00000397827 PALD1Q9ULE6 856 aa22.4■■□□□ 1.18
CHRFAM7A-202ENST00000397827 PHRF1Q9P1Y6 1649 aaKnown RBP22.4■■□□□ 1.18
CHRFAM7A-202ENST00000397827 ADCY9O60503 1353 aa22.4■■□□□ 1.18
CHRFAM7A-202ENST00000397827 A0A0U1RQG5 324 aaPredicted RBP22.39■■□□□ 1.18
CHRFAM7A-202ENST00000397827 BAG4O95429 457 aaKnown RBP22.39■■□□□ 1.18
CHRFAM7A-202ENST00000397827 RHPN1Q8TCX5 695 aa22.39■■□□□ 1.18
CHRFAM7A-202ENST00000397827 ZC3H6P61129 1189 aaKnown RBP22.39■■□□□ 1.17
CHRFAM7A-202ENST00000397827 IL25Q9H293 177 aa22.38■■□□□ 1.17
CHRFAM7A-202ENST00000397827 DBF4Q9UBU7 674 aaPredicted RBP22.38■■□□□ 1.17
CHRFAM7A-202ENST00000397827 GIGYF1O75420 1035 aaPredicted RBP22.38■■□□□ 1.17
CHRFAM7A-202ENST00000397827 ADAMTSL3P82987 1691 aa22.37■■□□□ 1.17
CHRFAM7A-202ENST00000397827 SLIT3O75094 1523 aa22.37■■□□□ 1.17
CHRFAM7A-202ENST00000397827 RAB11FIP3O75154 756 aa22.37■■□□□ 1.17
CHRFAM7A-202ENST00000397827 MAP3K2Q9Y2U5 619 aa22.37■■□□□ 1.17
CHRFAM7A-202ENST00000397827 NUCB2P80303 420 aa22.36■■□□□ 1.17
CHRFAM7A-202ENST00000397827 SKOR2Q2VWA4 1001 aaPredicted RBP22.36■■□□□ 1.17
CHRFAM7A-202ENST00000397827 CLEC17AQ6ZS10 378 aa22.36■■□□□ 1.17
CHRFAM7A-202ENST00000397827 CHMP4AQ9BY43 222 aa22.36■■□□□ 1.17
CHRFAM7A-202ENST00000397827 GOLGA6L22H0YM25 854 aa22.35■■□□□ 1.17
CHRFAM7A-202ENST00000397827 CYP2E1P05181 493 aaPredicted RBP22.35■■□□□ 1.17
CHRFAM7A-202ENST00000397827 KIF1BPQ96EK5 621 aa22.35■■□□□ 1.17
CHRFAM7A-202ENST00000397827 MCTP1Q6DN14 999 aa22.34■■□□□ 1.17
CHRFAM7A-202ENST00000397827 GAS2L3Q86XJ1 694 aa22.34■■□□□ 1.17
CHRFAM7A-202ENST00000397827 PI4K2BQ8TCG2 481 aa22.34■■□□□ 1.17
CHRFAM7A-202ENST00000397827 CLCN1P35523 988 aa22.34■■□□□ 1.17
CHRFAM7A-202ENST00000397827 MRE11P49959 708 aa22.34■■□□□ 1.17
CHRFAM7A-202ENST00000397827 NCAPD2Q15021 1401 aa22.34■■□□□ 1.17
CHRFAM7A-202ENST00000397827 CWF19L2Q2TBE0 894 aaKnown RBP22.34■■□□□ 1.17
CHRFAM7A-202ENST00000397827 NOL8Q76FK4 1167 aaKnown RBP22.34■■□□□ 1.17
CHRFAM7A-202ENST00000397827 DDX17Q92841 729 aaKnown RBP22.34■■□□□ 1.17
CHRFAM7A-202ENST00000397827 GRPEL1Q9HAV7 217 aa22.34■■□□□ 1.17
CHRFAM7A-202ENST00000397827 MCCP23508 829 aa22.33■■□□□ 1.17
CHRFAM7A-202ENST00000397827 CWC22Q9HCG8 908 aaKnown RBP22.33■■□□□ 1.17
CHRFAM7A-202ENST00000397827 AOX1Q06278 1338 aa22.33■■□□□ 1.17
CHRFAM7A-202ENST00000397827 TMX3Q96JJ7 454 aa22.33■■□□□ 1.17
CHRFAM7A-202ENST00000397827 C9orf78Q9NZ63 289 aaPredicted RBP22.33■■□□□ 1.17
CHRFAM7A-202ENST00000397827 PTMSP20962 102 aa22.33■■□□□ 1.16
CHRFAM7A-202ENST00000397827 RBM10P98175 930 aaKnown RBP22.33■■□□□ 1.16
CHRFAM7A-202ENST00000397827 DDX49Q9Y6V7 483 aaKnown RBP22.32■■□□□ 1.16
CHRFAM7A-202ENST00000397827 RGPD5Q99666 1765 aa22.32■■□□□ 1.16
CHRFAM7A-202ENST00000397827 ERBB3P21860 1342 aa22.32■■□□□ 1.16
CHRFAM7A-202ENST00000397827 C1orf167Q5SNV9 1468 aa22.32■■□□□ 1.16
CHRFAM7A-202ENST00000397827 OS9Q13438 667 aaPredicted RBP22.32■■□□□ 1.16
CHRFAM7A-202ENST00000397827 AIMP1Q12904 312 aaKnown RBP22.31■■□□□ 1.16
CHRFAM7A-202ENST00000397827 UPF3BQ9BZI7 483 aaKnown RBP22.31■■□□□ 1.16
CHRFAM7A-202ENST00000397827 ZDHHC9Q9Y397 364 aa22.31■■□□□ 1.16
CHRFAM7A-202ENST00000397827 TRPM3Q9HCF6 1732 aaPredicted RBP22.31■■□□□ 1.16
CHRFAM7A-202ENST00000397827 SLC39A6Q13433 755 aa22.31■■□□□ 1.16
CHRFAM7A-202ENST00000397827 KSR2Q6VAB6 950 aa22.31■■□□□ 1.16
CHRFAM7A-202ENST00000397827 C19orf44Q9H6X5 657 aa22.31■■□□□ 1.16
CHRFAM7A-202ENST00000397827 HEG1Q9ULI3 1381 aa22.3■■□□□ 1.16
CHRFAM7A-202ENST00000397827 CHAMP1Q96JM3 812 aa22.3■■□□□ 1.16
CHRFAM7A-202ENST00000397827 PA2G4Q9UQ80 394 aaKnown RBP22.3■■□□□ 1.16
CHRFAM7A-202ENST00000397827 FOXD4L5Q5VV16 416 aaPredicted RBP22.29■■□□□ 1.16
CHRFAM7A-202ENST00000397827 FOXD4L4Q8WXT5 416 aaPredicted RBP22.29■■□□□ 1.16
CHRFAM7A-202ENST00000397827 NLRP2Q9NX02 1062 aa22.29■■□□□ 1.16
CHRFAM7A-202ENST00000397827 ANAPC15P60006 121 aa22.28■■□□□ 1.16
CHRFAM7A-202ENST00000397827 KLHL40Q2TBA0 621 aa22.27■■□□□ 1.16
CHRFAM7A-202ENST00000397827 HSP90AB4PQ58FF6 505 aa22.27■■□□□ 1.16
CHRFAM7A-202ENST00000397827 RAPGEF4Q8WZA2 1011 aa22.27■■□□□ 1.16
CHRFAM7A-202ENST00000397827 OVOS2A0A0G2JMS6 1433 aa22.27■■□□□ 1.16
CHRFAM7A-202ENST00000397827 ALDH1L1O75891 902 aa22.27■■□□□ 1.15
CHRFAM7A-202ENST00000397827 MTX1Q13505 466 aa22.26■■□□□ 1.15
CHRFAM7A-202ENST00000397827 CABLES1Q8TDN4 633 aa22.26■■□□□ 1.15
CHRFAM7A-202ENST00000397827 HYPKQ9NX55 129 aa22.26■■□□□ 1.15
CHRFAM7A-202ENST00000397827 CNTROBQ8N137 903 aa22.26■■□□□ 1.15
CHRFAM7A-202ENST00000397827 LMBRD1Q9NUN5 540 aa22.26■■□□□ 1.15
CHRFAM7A-202ENST00000397827 NCLP19338 710 aaKnown RBP22.25■■□□□ 1.15
CHRFAM7A-202ENST00000397827 CWC27Q6UX04 472 aaKnown RBP22.25■■□□□ 1.15
CHRFAM7A-202ENST00000397827 SGSM2O43147 1006 aa22.25■■□□□ 1.15
CHRFAM7A-202ENST00000397827 MCM2P49736 904 aa22.25■■□□□ 1.15
CHRFAM7A-202ENST00000397827 ZNF790Q6PG37 636 aa22.25■■□□□ 1.15
CHRFAM7A-202ENST00000397827 ISY1Q9ULR0 285 aaKnown RBP22.25■■□□□ 1.15
CHRFAM7A-202ENST00000397827 CAMTA1Q9Y6Y1 1673 aa22.25■■□□□ 1.15
CHRFAM7A-202ENST00000397827 HSPA4P34932 840 aa22.24■■□□□ 1.15
CHRFAM7A-202ENST00000397827 PDIA6Q15084 440 aa22.24■■□□□ 1.15
CHRFAM7A-202ENST00000397827 CLASRPQ8N2M8 674 aaKnown RBP22.24■■□□□ 1.15
CHRFAM7A-202ENST00000397827 NFATC2IPQ8NCF5 419 aa22.24■■□□□ 1.15
CHRFAM7A-202ENST00000397827 DDX21Q9NR30 783 aaKnown RBP eCLIP22.24■■□□□ 1.15
CHRFAM7A-202ENST00000397827 MYL6BP14649 208 aa22.24■■□□□ 1.15
CHRFAM7A-202ENST00000397827 PRPF40AO75400 957 aaKnown RBP22.23■■□□□ 1.15
CHRFAM7A-202ENST00000397827 SUCLG2Q96I99 432 aa22.23■■□□□ 1.15
CHRFAM7A-202ENST00000397827 GRM8O00222 908 aa22.23■■□□□ 1.15
CHRFAM7A-202ENST00000397827 ATF3P18847 181 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms