RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 MVPQ14764 893 aaKnown RBP25.97■■□□□ 1.75
VCPKMT-202ENST00000395860 FLIIQ13045 1269 aa25.97■■□□□ 1.75
VCPKMT-202ENST00000395860 TMEM57Q8N5G2 664 aa25.96■■□□□ 1.75
VCPKMT-202ENST00000395860 USP16Q9Y5T5 823 aa25.96■■□□□ 1.75
VCPKMT-202ENST00000395860 BRWD3Q6RI45 1802 aa25.95■■□□□ 1.75
VCPKMT-202ENST00000395860 ABCC4O15439 1325 aa25.95■■□□□ 1.75
VCPKMT-202ENST00000395860 ITPRIPQ8IWB1 547 aa25.95■■□□□ 1.75
VCPKMT-202ENST00000395860 RGS12O14924 1447 aa25.95■■□□□ 1.74
VCPKMT-202ENST00000395860 RBM6P78332 1123 aaKnown RBP25.94■■□□□ 1.74
VCPKMT-202ENST00000395860 FKBP5Q13451 457 aaPredicted RBP25.94■■□□□ 1.74
VCPKMT-202ENST00000395860 PHAXQ9H814 394 aaKnown RBP25.94■■□□□ 1.74
VCPKMT-202ENST00000395860 ANXA1P04083 346 aa25.93■■□□□ 1.74
VCPKMT-202ENST00000395860 RBM42Q9BTD8 480 aaKnown RBP25.93■■□□□ 1.74
VCPKMT-202ENST00000395860 NHSQ6T4R5 1651 aa25.93■■□□□ 1.74
VCPKMT-202ENST00000395860 B4GALNT3Q6L9W6 998 aa25.92■■□□□ 1.74
VCPKMT-202ENST00000395860 CCDC136Q96JN2 1154 aa25.92■■□□□ 1.74
VCPKMT-202ENST00000395860 DDX21Q9NR30 783 aaKnown RBP eCLIP25.92■■□□□ 1.74
VCPKMT-202ENST00000395860 DDX19BQ9UMR2 479 aa25.92■■□□□ 1.74
VCPKMT-202ENST00000395860 SBF2Q86WG5 1849 aa25.92■■□□□ 1.74
VCPKMT-202ENST00000395860 VSIG10Q8N0Z9 540 aa25.92■■□□□ 1.74
VCPKMT-202ENST00000395860 HYPKQ9NX55 129 aa25.92■■□□□ 1.74
VCPKMT-202ENST00000395860 KCNQ2O43526 872 aa25.91■■□□□ 1.74
VCPKMT-202ENST00000395860 FAM182BQ5T319 152 aa25.91■■□□□ 1.74
VCPKMT-202ENST00000395860 PROSER3Q2NL68 480 aa25.9■■□□□ 1.74
VCPKMT-202ENST00000395860 TEX13AQ9BXU3 409 aaPredicted RBP25.9■■□□□ 1.74
VCPKMT-202ENST00000395860 AAMPQ13685 434 aa25.89■■□□□ 1.73
VCPKMT-202ENST00000395860 PDIA6Q15084 440 aa25.89■■□□□ 1.73
VCPKMT-202ENST00000395860 N4BP2Q86UW6 1770 aaPredicted RBP25.88■■□□□ 1.73
VCPKMT-202ENST00000395860 F6X3S4 739 aa25.88■■□□□ 1.73
VCPKMT-202ENST00000395860 BTAF1O14981 1849 aa25.88■■□□□ 1.73
VCPKMT-202ENST00000395860 TJP1Q07157 1748 aa25.88■■□□□ 1.73
VCPKMT-202ENST00000395860 MYL6BP14649 208 aa25.87■■□□□ 1.73
VCPKMT-202ENST00000395860 ERBB4Q15303 1308 aa25.87■■□□□ 1.73
VCPKMT-202ENST00000395860 INTS3Q68E01 1043 aaKnown RBP25.87■■□□□ 1.73
VCPKMT-202ENST00000395860 SLC4A10Q6U841 1118 aa25.86■■□□□ 1.73
VCPKMT-202ENST00000395860 DNAJC10Q8IXB1 793 aa25.86■■□□□ 1.73
VCPKMT-202ENST00000395860 SMARCC1Q92922 1105 aaPredicted RBP25.86■■□□□ 1.73
VCPKMT-202ENST00000395860 KRT27Q7Z3Y8 459 aa25.85■■□□□ 1.73
VCPKMT-202ENST00000395860 CHMP4BQ9H444 224 aaKnown RBP25.85■■□□□ 1.73
VCPKMT-202ENST00000395860 RXRBP28702 533 aa25.84■■□□□ 1.73
VCPKMT-202ENST00000395860 PALLDQ8WX93 1383 aa25.84■■□□□ 1.73
VCPKMT-202ENST00000395860 PXDNLA1KZ92 1463 aa25.84■■□□□ 1.73
VCPKMT-202ENST00000395860 PIP4K2AP48426 406 aaPredicted RBP25.84■■□□□ 1.73
VCPKMT-202ENST00000395860 SLC4A9Q96Q91 983 aa25.84■■□□□ 1.73
VCPKMT-202ENST00000395860 STARD3NLO95772 234 aa25.83■■□□□ 1.73
VCPKMT-202ENST00000395860 CCT4P50991 539 aaKnown RBP25.83■■□□□ 1.73
VCPKMT-202ENST00000395860 DDX58O95786 925 aaKnown RBP25.82■■□□□ 1.72
VCPKMT-202ENST00000395860 A1BGP04217 495 aa25.82■■□□□ 1.72
VCPKMT-202ENST00000395860 AIMP1Q12904 312 aaKnown RBP25.82■■□□□ 1.72
VCPKMT-202ENST00000395860 CICQ96RK0 1608 aaPredicted RBP25.82■■□□□ 1.72
VCPKMT-202ENST00000395860 RGS17Q9UGC6 210 aaPredicted RBP25.82■■□□□ 1.72
VCPKMT-202ENST00000395860 PI4KAP2A4QPH2 592 aa25.81■■□□□ 1.72
VCPKMT-202ENST00000395860 NBPF26B4DH59 902 aa25.81■■□□□ 1.72
VCPKMT-202ENST00000395860 ZBTB7BO15156 539 aaPredicted RBP25.81■■□□□ 1.72
VCPKMT-202ENST00000395860 NBPF14Q5TI25 921 aa25.81■■□□□ 1.72
VCPKMT-202ENST00000395860 NBPF10Q6P3W6 841 aaKnown RBP25.81■■□□□ 1.72
VCPKMT-202ENST00000395860 NBPF15Q8N660 670 aa25.81■■□□□ 1.72
VCPKMT-202ENST00000395860 PI4KAP1Q8N8J0 262 aa25.81■■□□□ 1.72
VCPKMT-202ENST00000395860 ZNF831Q5JPB2 1677 aa25.81■■□□□ 1.72
VCPKMT-202ENST00000395860 ADCY9O60503 1353 aa25.8■■□□□ 1.72
VCPKMT-202ENST00000395860 LOC102724428A0A0B4J2F2 783 aa25.8■■□□□ 1.72
VCPKMT-202ENST00000395860 SIK1P57059 783 aa25.8■■□□□ 1.72
VCPKMT-202ENST00000395860 COPS6Q7L5N1 327 aa25.8■■□□□ 1.72
VCPKMT-202ENST00000395860 PTF1AQ7RTS3 328 aa25.8■■□□□ 1.72
VCPKMT-202ENST00000395860 LRP10Q7Z4F1 713 aa25.8■■□□□ 1.72
VCPKMT-202ENST00000395860 XAGE3Q8WTP9 111 aa25.8■■□□□ 1.72
VCPKMT-202ENST00000395860 DNAAF4Q8WXU2 420 aa25.8■■□□□ 1.72
VCPKMT-202ENST00000395860 ATP6V1AP38606 617 aa25.79■■□□□ 1.72
VCPKMT-202ENST00000395860 KSR2Q6VAB6 950 aa25.79■■□□□ 1.72
VCPKMT-202ENST00000395860 FAM196AQ6ZSG2 479 aa25.79■■□□□ 1.72
VCPKMT-202ENST00000395860 ZBTB40Q9NUA8 1239 aa25.79■■□□□ 1.72
VCPKMT-202ENST00000395860 CYP19A1P11511 503 aaPredicted RBP25.78■■□□□ 1.72
VCPKMT-202ENST00000395860 MAP3K2Q9Y2U5 619 aa25.78■■□□□ 1.72
VCPKMT-202ENST00000395860 ARFGEF2Q9Y6D5 1785 aa25.77■■□□□ 1.72
VCPKMT-202ENST00000395860 POTEAQ6S8J7 498 aa25.76■■□□□ 1.71
VCPKMT-202ENST00000395860 RIC3Q7Z5B4 369 aa25.76■■□□□ 1.71
VCPKMT-202ENST00000395860 COL5A3P25940 1745 aaPredicted RBP25.76■■□□□ 1.71
VCPKMT-202ENST00000395860 LY75O60449 1722 aa25.75■■□□□ 1.71
VCPKMT-202ENST00000395860 ANKRD13DQ6ZTN6 518 aa25.74■■□□□ 1.71
VCPKMT-202ENST00000395860 SRCIN1Q9C0H9 1055 aa25.74■■□□□ 1.71
VCPKMT-202ENST00000395860 BCL11BQ9C0K0 894 aaPredicted RBP25.74■■□□□ 1.71
VCPKMT-202ENST00000395860 PCDHB15Q9Y5E8 787 aa25.74■■□□□ 1.71
VCPKMT-202ENST00000395860 ATP10DQ9P241 1426 aa25.74■■□□□ 1.71
VCPKMT-202ENST00000395860 NUP188Q5SRE5 1749 aa25.73■■□□□ 1.71
VCPKMT-202ENST00000395860 ITPK1Q13572 414 aa25.72■■□□□ 1.71
VCPKMT-202ENST00000395860 BEND3Q5T5X7 828 aa25.72■■□□□ 1.71
VCPKMT-202ENST00000395860 ZNF330Q9Y3S2 320 aaPredicted RBP25.72■■□□□ 1.71
VCPKMT-202ENST00000395860 RREB1Q92766 1687 aa25.71■■□□□ 1.71
VCPKMT-202ENST00000395860 PLBD2Q8NHP8 589 aa25.71■■□□□ 1.71
VCPKMT-202ENST00000395860 MEIS3Q99687 375 aa25.71■■□□□ 1.71
VCPKMT-202ENST00000395860 AFDNP55196 1824 aaKnown RBP25.7■■□□□ 1.71
VCPKMT-202ENST00000395860 C1orf115Q9H7X2 142 aa25.7■■□□□ 1.7
VCPKMT-202ENST00000395860 ZBTB1Q9Y2K1 713 aa25.7■■□□□ 1.7
VCPKMT-202ENST00000395860 NEXNQ0ZGT2 675 aa25.69■■□□□ 1.7
VCPKMT-202ENST00000395860 TTLL7Q6ZT98 887 aa25.69■■□□□ 1.7
VCPKMT-202ENST00000395860 CCDC87Q9NVE4 849 aa25.69■■□□□ 1.7
VCPKMT-202ENST00000395860 CRKLP46109 303 aaKnown RBP25.69■■□□□ 1.7
VCPKMT-202ENST00000395860 METTL22Q9BUU2 404 aaPredicted RBP25.69■■□□□ 1.7
VCPKMT-202ENST00000395860 MYH14Q7Z406 1995 aaKnown RBP25.69■■□□□ 1.7
VCPKMT-202ENST00000395860 ALDH1L1O75891 902 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms