RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 ERVV-2B6SEH9 535 aa19.42■□□□□ 0.7
PFDN6-204ENST00000395131 MAP2K1Q02750 393 aaPredicted RBP19.42■□□□□ 0.7
PFDN6-204ENST00000395131 RASSF10A6NK89 507 aa19.41■□□□□ 0.7
PFDN6-204ENST00000395131 ITGBL1O95965 494 aaPredicted RBP19.41■□□□□ 0.7
PFDN6-204ENST00000395131 GGNBP2Q9H3C7 697 aa19.41■□□□□ 0.7
PFDN6-204ENST00000395131 LDHDQ86WU2 507 aa19.4■□□□□ 0.7
PFDN6-204ENST00000395131 CRKLP46109 303 aaKnown RBP19.39■□□□□ 0.69
PFDN6-204ENST00000395131 ERFEQ4G0M1 354 aa19.39■□□□□ 0.69
PFDN6-204ENST00000395131 CARD11Q9BXL7 1154 aa19.39■□□□□ 0.69
PFDN6-204ENST00000395131 KIF20BQ96Q89 1820 aa19.37■□□□□ 0.69
PFDN6-204ENST00000395131 DEFB115Q30KQ5 88 aa19.37■□□□□ 0.69
PFDN6-204ENST00000395131 PDE4DIPQ5VU43 2346 aa19.37■□□□□ 0.69
PFDN6-204ENST00000395131 TNRC18O15417 2968 aaPredicted RBP19.37■□□□□ 0.69
PFDN6-204ENST00000395131 ANKRD26Q9UPS8 1709 aa19.37■□□□□ 0.69
PFDN6-204ENST00000395131 IQCA1LA6NCM1 817 aa19.36■□□□□ 0.69
PFDN6-204ENST00000395131 DDNO94850 711 aaPredicted RBP19.36■□□□□ 0.69
PFDN6-204ENST00000395131 EYA1Q99502 592 aa19.36■□□□□ 0.69
PFDN6-204ENST00000395131 TJP1Q07157 1748 aa19.36■□□□□ 0.69
PFDN6-204ENST00000395131 THSD7BQ9C0I4 1608 aa19.36■□□□□ 0.69
PFDN6-204ENST00000395131 ADAMTSL1Q8N6G6 1762 aa19.35■□□□□ 0.69
PFDN6-204ENST00000395131 WDR33Q9C0J8 1336 aaKnown RBP19.35■□□□□ 0.69
PFDN6-204ENST00000395131 LTBP3Q9NS15 1303 aa19.35■□□□□ 0.69
PFDN6-204ENST00000395131 L3MBTL3Q96JM7 780 aaPredicted RBP19.34■□□□□ 0.69
PFDN6-204ENST00000395131 H0YIN7 160 aa19.33■□□□□ 0.68
PFDN6-204ENST00000395131 ZPR1O75312 459 aa19.33■□□□□ 0.68
PFDN6-204ENST00000395131 NFIXQ14938 502 aa19.33■□□□□ 0.68
PFDN6-204ENST00000395131 USPL1Q5W0Q7 1092 aa19.33■□□□□ 0.68
PFDN6-204ENST00000395131 INTS5Q6P9B9 1019 aaKnown RBP19.33■□□□□ 0.68
PFDN6-204ENST00000395131 C2CD5Q86YS7 1000 aa19.33■□□□□ 0.68
PFDN6-204ENST00000395131 TESK2Q96S53 571 aa19.33■□□□□ 0.68
PFDN6-204ENST00000395131 TAF1DQ9H5J8 278 aaPredicted RBP19.33■□□□□ 0.68
PFDN6-204ENST00000395131 EMILIN1Q9Y6C2 1016 aa19.33■□□□□ 0.68
PFDN6-204ENST00000395131 WASHC2AQ641Q2 1341 aa19.32■□□□□ 0.68
PFDN6-204ENST00000395131 SLC24A1O60721 1099 aa19.32■□□□□ 0.68
PFDN6-204ENST00000395131 HSP90AB1P08238 724 aaKnown RBP19.32■□□□□ 0.68
PFDN6-204ENST00000395131 SERPINB2P05120 415 aa19.31■□□□□ 0.68
PFDN6-204ENST00000395131 SIN3AQ96ST3 1273 aa19.3■□□□□ 0.68
PFDN6-204ENST00000395131 ANKRD31Q8N7Z5 1873 aa19.29■□□□□ 0.68
PFDN6-204ENST00000395131 PTCD1O75127 700 aaKnown RBP19.29■□□□□ 0.68
PFDN6-204ENST00000395131 NARFQ9UHQ1 456 aa19.29■□□□□ 0.68
PFDN6-204ENST00000395131 PDZRN3Q9UPQ7 1066 aa19.29■□□□□ 0.68
PFDN6-204ENST00000395131 C21orf2O43822 256 aa19.28■□□□□ 0.68
PFDN6-204ENST00000395131 CABP4P57796 275 aa19.28■□□□□ 0.68
PFDN6-204ENST00000395131 TAOK3Q9H2K8 898 aa19.28■□□□□ 0.68
PFDN6-204ENST00000395131 SOS1Q07889 1333 aaPredicted RBP19.27■□□□□ 0.68
PFDN6-204ENST00000395131 CARMIL3Q8ND23 1372 aa19.27■□□□□ 0.68
PFDN6-204ENST00000395131 BEGAINQ9BUH8 593 aa19.26■□□□□ 0.67
PFDN6-204ENST00000395131 BCL2L12Q9HB09 334 aa19.26■□□□□ 0.67
PFDN6-204ENST00000395131 CNTROBQ8N137 903 aa19.25■□□□□ 0.67
PFDN6-204ENST00000395131 MCOLN1Q9GZU1 580 aa19.25■□□□□ 0.67
PFDN6-204ENST00000395131 COL11A2P13942 1736 aaPredicted RBP19.24■□□□□ 0.67
PFDN6-204ENST00000395131 ARFGEF2Q9Y6D5 1785 aa19.24■□□□□ 0.67
PFDN6-204ENST00000395131 SLX4Q8IY92 1834 aa19.23■□□□□ 0.67
PFDN6-204ENST00000395131 PNMA8AQ86V59 439 aaPredicted RBP19.23■□□□□ 0.67
PFDN6-204ENST00000395131 CASP8AP2Q9UKL3 1982 aa19.23■□□□□ 0.67
PFDN6-204ENST00000395131 LTBP1Q14766 1721 aa19.22■□□□□ 0.67
PFDN6-204ENST00000395131 PPM1GO15355 546 aaPredicted RBP19.22■□□□□ 0.67
PFDN6-204ENST00000395131 PDE6BP35913 854 aa19.22■□□□□ 0.67
PFDN6-204ENST00000395131 ECE1P42892 770 aa19.22■□□□□ 0.67
PFDN6-204ENST00000395131 EAPPQ56P03 285 aaPredicted RBP19.22■□□□□ 0.67
PFDN6-204ENST00000395131 NFATC2IPQ8NCF5 419 aa19.22■□□□□ 0.67
PFDN6-204ENST00000395131 ZNF622Q969S3 477 aaKnown RBP eCLIP19.22■□□□□ 0.673e-9■□□□□ 10.4
PFDN6-204ENST00000395131 CFAP44Q96MT7 982 aa19.22■□□□□ 0.67
PFDN6-204ENST00000395131 BRIP1Q9BX63 1249 aa19.22■□□□□ 0.67
PFDN6-204ENST00000395131 HACL1Q9UJ83 578 aa19.22■□□□□ 0.67
PFDN6-204ENST00000395131 ABT1Q9ULW3 272 aaKnown RBP19.22■□□□□ 0.67
PFDN6-204ENST00000395131 CLEC11AQ9Y240 323 aa19.22■□□□□ 0.67
PFDN6-204ENST00000395131 ST20-MTHFSA0A0A6YYL1 179 aa19.21■□□□□ 0.67
PFDN6-204ENST00000395131 EPHX2P34913 555 aa19.21■□□□□ 0.67
PFDN6-204ENST00000395131 NEUROD1Q13562 356 aa19.21■□□□□ 0.67
PFDN6-204ENST00000395131 PLEKHO1Q53GL0 409 aaPredicted RBP19.21■□□□□ 0.67
PFDN6-204ENST00000395131 SOGA3Q5TF21 947 aa19.21■□□□□ 0.67
PFDN6-204ENST00000395131 CAPNS2Q96L46 248 aa19.21■□□□□ 0.67
PFDN6-204ENST00000395131 GPR101Q96P66 508 aaPredicted RBP19.21■□□□□ 0.67
PFDN6-204ENST00000395131 COL15A1P39059 1388 aa19.2■□□□□ 0.66
PFDN6-204ENST00000395131 CACNA1SQ13698 1873 aa19.2■□□□□ 0.66
PFDN6-204ENST00000395131 CYP19A1P11511 503 aaPredicted RBP19.2■□□□□ 0.66
PFDN6-204ENST00000395131 MAP1SQ66K74 1059 aaPredicted RBP19.2■□□□□ 0.66
PFDN6-204ENST00000395131 DNAJC10Q8IXB1 793 aa19.2■□□□□ 0.66
PFDN6-204ENST00000395131 ZNF219Q9P2Y4 722 aaPredicted RBP19.2■□□□□ 0.66
PFDN6-204ENST00000395131 MAP2K2P36507 400 aa19.19■□□□□ 0.66
PFDN6-204ENST00000395131 MTHFSP49914 203 aa19.19■□□□□ 0.66
PFDN6-204ENST00000395131 AMOTQ4VCS5 1084 aa19.19■□□□□ 0.66
PFDN6-204ENST00000395131 DDX21Q9NR30 783 aaKnown RBP eCLIP19.19■□□□□ 0.66
PFDN6-204ENST00000395131 TRPM7Q96QT4 1865 aa19.19■□□□□ 0.66
PFDN6-204ENST00000395131 SCN11AQ9UI33 1791 aa19.19■□□□□ 0.66
PFDN6-204ENST00000395131 CA12O43570 354 aa19.18■□□□□ 0.66
PFDN6-204ENST00000395131 EIF4A2Q14240 407 aaKnown RBP19.18■□□□□ 0.66
PFDN6-204ENST00000395131 PRPF38BQ5VTL8 546 aaKnown RBP19.18■□□□□ 0.66
PFDN6-204ENST00000395131 CNKSR1Q969H4 720 aa19.18■□□□□ 0.66
PFDN6-204ENST00000395131 POLKQ9UBT6 870 aa19.18■□□□□ 0.66
PFDN6-204ENST00000395131 ZNF530Q6P9A1 599 aaPredicted RBP19.17■□□□□ 0.66
PFDN6-204ENST00000395131 STYK1Q6J9G0 422 aa19.16■□□□□ 0.66
PFDN6-204ENST00000395131 CARD14Q9BXL6 1004 aa19.16■□□□□ 0.66
PFDN6-204ENST00000395131 CYP4F22Q6NT55 531 aa19.15■□□□□ 0.66
PFDN6-204ENST00000395131 C7orf43Q8WVR3 580 aa19.15■□□□□ 0.66
PFDN6-204ENST00000395131 TSKSQ9UJT2 592 aa19.15■□□□□ 0.66
PFDN6-204ENST00000395131 ZNF541Q9H0D2 1346 aa19.15■□□□□ 0.66
PFDN6-204ENST00000395131 DGKZQ13574 1117 aa19.14■□□□□ 0.65
PFDN6-204ENST00000395131 PRR5LQ6MZQ0 368 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms