RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 LDHAL6AQ6ZMR3 332 aa23.44■■□□□ 1.34
CXXC4-201ENST00000394767 DDX21Q9NR30 783 aaKnown RBP eCLIP23.44■■□□□ 1.34
CXXC4-201ENST00000394767 SPATA31D1Q6ZQQ2 1576 aa23.44■■□□□ 1.34
CXXC4-201ENST00000394767 PTCH1Q13635 1447 aa23.44■■□□□ 1.34
CXXC4-201ENST00000394767 APBA3O96018 575 aa23.44■■□□□ 1.34
CXXC4-201ENST00000394767 ZNF496Q96IT1 587 aaPredicted RBP23.44■■□□□ 1.34
CXXC4-201ENST00000394767 BABAM1Q9NWV8 329 aa23.44■■□□□ 1.34
CXXC4-201ENST00000394767 RICTORQ6R327 1708 aa23.44■■□□□ 1.34
CXXC4-201ENST00000394767 ERVV-2B6SEH9 535 aa23.44■■□□□ 1.34
CXXC4-201ENST00000394767 RALYLQ86SE5 291 aaKnown RBP23.44■■□□□ 1.34
CXXC4-201ENST00000394767 ZNF622Q969S3 477 aaKnown RBP eCLIP23.44■■□□□ 1.34
CXXC4-201ENST00000394767 ST5P78524 1137 aa23.43■■□□□ 1.34
CXXC4-201ENST00000394767 CHAF1AQ13111 956 aaPredicted RBP23.43■■□□□ 1.34
CXXC4-201ENST00000394767 IL17REQ8NFR9 667 aa23.43■■□□□ 1.34
CXXC4-201ENST00000394767 CDC5LQ99459 802 aaKnown RBP23.43■■□□□ 1.34
CXXC4-201ENST00000394767 HIP1O00291 1037 aa23.43■■□□□ 1.34
CXXC4-201ENST00000394767 UNC5CLQ8IV45 518 aa23.43■■□□□ 1.34
CXXC4-201ENST00000394767 PHAXQ9H814 394 aaKnown RBP23.43■■□□□ 1.34
CXXC4-201ENST00000394767 SMARCA5O60264 1052 aaPredicted RBP23.43■■□□□ 1.34
CXXC4-201ENST00000394767 DNAJC10Q8IXB1 793 aa23.43■■□□□ 1.34
CXXC4-201ENST00000394767 RTL1A6NKG5 1358 aa23.42■■□□□ 1.34
CXXC4-201ENST00000394767 AKAP17AQ02040 695 aaKnown RBP23.42■■□□□ 1.34
CXXC4-201ENST00000394767 TRAPPC3LQ5T215 181 aa23.42■■□□□ 1.34
CXXC4-201ENST00000394767 MEIS3Q99687 375 aa23.42■■□□□ 1.34
CXXC4-201ENST00000394767 KIF3AQ9Y496 699 aa23.42■■□□□ 1.34
CXXC4-201ENST00000394767 C1orf167Q5SNV9 1468 aa23.42■■□□□ 1.34
CXXC4-201ENST00000394767 A1BGP04217 495 aa23.42■■□□□ 1.34
CXXC4-201ENST00000394767 ABCF2Q9UG63 623 aa23.42■■□□□ 1.34
CXXC4-201ENST00000394767 FER1L4A9Z1Z3 1794 aa23.42■■□□□ 1.34
CXXC4-201ENST00000394767 RAB11FIP3O75154 756 aa23.42■■□□□ 1.34
CXXC4-201ENST00000394767 RBM5P52756 815 aaKnown RBP eCLIP23.42■■□□□ 1.34
CXXC4-201ENST00000394767 RXRBP28702 533 aa23.41■■□□□ 1.34
CXXC4-201ENST00000394767 IGSF1Q8N6C5 1336 aa23.41■■□□□ 1.34
CXXC4-201ENST00000394767 CAVIN4Q5BKX8 364 aa23.41■■□□□ 1.34
CXXC4-201ENST00000394767 CPLX2Q6PUV4 134 aaKnown RBP23.41■■□□□ 1.34
CXXC4-201ENST00000394767 TULP4Q9NRJ4 1543 aa23.41■■□□□ 1.34
CXXC4-201ENST00000394767 LRP2BPQ9P2M1 347 aa23.41■■□□□ 1.34
CXXC4-201ENST00000394767 ERICH2A1L162 156 aa23.41■■□□□ 1.34
CXXC4-201ENST00000394767 LINS1Q8NG48 757 aa23.41■■□□□ 1.34
CXXC4-201ENST00000394767 RAI14Q9P0K7 980 aa23.41■■□□□ 1.34
CXXC4-201ENST00000394767 GRM8O00222 908 aa23.4■■□□□ 1.34
CXXC4-201ENST00000394767 FAM182BQ5T319 152 aa23.4■■□□□ 1.34
CXXC4-201ENST00000394767 NFXL1Q6ZNB6 911 aa23.4■■□□□ 1.34
CXXC4-201ENST00000394767 NLRP3Q96P20 1036 aa23.4■■□□□ 1.34
CXXC4-201ENST00000394767 ALDH1L1O75891 902 aa23.4■■□□□ 1.34
CXXC4-201ENST00000394767 SETBP1Q9Y6X0 1596 aa23.4■■□□□ 1.34
CXXC4-201ENST00000394767 C6orf229H3BNL8 230 aa23.39■■□□□ 1.34
CXXC4-201ENST00000394767 IDH1O75874 414 aaKnown RBP23.39■■□□□ 1.34
CXXC4-201ENST00000394767 CWF19L2Q2TBE0 894 aaKnown RBP23.39■■□□□ 1.33
CXXC4-201ENST00000394767 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.39■■□□□ 1.33
CXXC4-201ENST00000394767 CCDC8Q9H0W5 538 aaPredicted RBP23.39■■□□□ 1.33
CXXC4-201ENST00000394767 DHX16O60231 1041 aaKnown RBP23.38■■□□□ 1.33
CXXC4-201ENST00000394767 FAM184AQ8NB25 1140 aa23.38■■□□□ 1.33
CXXC4-201ENST00000394767 UTP14AQ9BVJ6 771 aaKnown RBP23.38■■□□□ 1.33
CXXC4-201ENST00000394767 STK32BQ9NY57 414 aa23.38■■□□□ 1.33
CXXC4-201ENST00000394767 CCDC152Q4G0S7 254 aa23.38■■□□□ 1.33
CXXC4-201ENST00000394767 TPTE2Q6XPS3 522 aa23.38■■□□□ 1.33
CXXC4-201ENST00000394767 TNS3Q68CZ2 1445 aa23.37■■□□□ 1.33
CXXC4-201ENST00000394767 SOS1Q07889 1333 aaPredicted RBP23.37■■□□□ 1.33
CXXC4-201ENST00000394767 CPLX1O14810 134 aa23.37■■□□□ 1.33
CXXC4-201ENST00000394767 CHMP4CQ96CF2 233 aa23.37■■□□□ 1.33
CXXC4-201ENST00000394767 TSHZ2Q9NRE2 1034 aa23.37■■□□□ 1.33
CXXC4-201ENST00000394767 KIF24Q5T7B8 1368 aa23.37■■□□□ 1.33
CXXC4-201ENST00000394767 LMBR1LQ6UX01 489 aa23.36■■□□□ 1.33
CXXC4-201ENST00000394767 AXIN2Q9Y2T1 843 aa23.36■■□□□ 1.33
CXXC4-201ENST00000394767 ZSCAN25Q6NSZ9 544 aa23.36■■□□□ 1.33
CXXC4-201ENST00000394767 G2E3Q7L622 706 aa23.36■■□□□ 1.33
CXXC4-201ENST00000394767 C22orf23Q9BZE7 217 aa23.36■■□□□ 1.33
CXXC4-201ENST00000394767 LAMC1P11047 1609 aa23.36■■□□□ 1.33
CXXC4-201ENST00000394767 CTDP1Q9Y5B0 961 aaPredicted RBP23.36■■□□□ 1.33
CXXC4-201ENST00000394767 KCNQ3O43525 872 aa23.35■■□□□ 1.33
CXXC4-201ENST00000394767 HOXB7P09629 217 aa23.35■■□□□ 1.33
CXXC4-201ENST00000394767 SAMD1Q6SPF0 538 aaPredicted RBP23.35■■□□□ 1.33
CXXC4-201ENST00000394767 SLC5A1P13866 664 aa23.35■■□□□ 1.33
CXXC4-201ENST00000394767 EIF4A1P60842 406 aaKnown RBP23.35■■□□□ 1.33
CXXC4-201ENST00000394767 BAG6P46379 1132 aa23.35■■□□□ 1.33
CXXC4-201ENST00000394767 BOLA2Q9H3K6 86 aa23.35■■□□□ 1.33
CXXC4-201ENST00000394767 PTPRUQ92729 1446 aa23.35■■□□□ 1.33
CXXC4-201ENST00000394767 CCDC87Q9NVE4 849 aa23.35■■□□□ 1.33
CXXC4-201ENST00000394767 FOXD4L5Q5VV16 416 aaPredicted RBP23.35■■□□□ 1.33
CXXC4-201ENST00000394767 FOXD4L4Q8WXT5 416 aaPredicted RBP23.35■■□□□ 1.33
CXXC4-201ENST00000394767 CDC42BPGQ6DT37 1551 aa23.34■■□□□ 1.33
CXXC4-201ENST00000394767 PARP3Q9Y6F1 533 aa23.34■■□□□ 1.33
CXXC4-201ENST00000394767 MX1P20591 662 aa23.34■■□□□ 1.33
CXXC4-201ENST00000394767 NYXQ9GZU5 481 aa23.34■■□□□ 1.33
CXXC4-201ENST00000394767 TNNQ9UQP3 1299 aa23.34■■□□□ 1.33
CXXC4-201ENST00000394767 AFF2P51816 1311 aa23.34■■□□□ 1.33
CXXC4-201ENST00000394767 H3BQV1 296 aa23.33■■□□□ 1.33
CXXC4-201ENST00000394767 IFFO2Q5TF58 517 aa23.33■■□□□ 1.33
CXXC4-201ENST00000394767 HSPA1LP34931 641 aa23.33■■□□□ 1.33
CXXC4-201ENST00000394767 MTMR7Q9Y216 660 aa23.33■■□□□ 1.32
CXXC4-201ENST00000394767 GLRX3O76003 335 aaKnown RBP23.33■■□□□ 1.32
CXXC4-201ENST00000394767 RRP12Q5JTH9 1297 aaKnown RBP23.33■■□□□ 1.32
CXXC4-201ENST00000394767 GBP4Q96PP9 640 aa23.32■■□□□ 1.32
CXXC4-201ENST00000394767 VWDEQ8N2E2 1590 aa23.32■■□□□ 1.32
CXXC4-201ENST00000394767 POLD1P28340 1107 aa23.32■■□□□ 1.32
CXXC4-201ENST00000394767 SEPT12Q8IYM1 358 aa23.32■■□□□ 1.32
CXXC4-201ENST00000394767 NACAP1Q9BZK3 213 aa23.32■■□□□ 1.32
CXXC4-201ENST00000394767 ANKRD18AQ8IVF6 992 aa23.31■■□□□ 1.32
CXXC4-201ENST00000394767 KRT27Q7Z3Y8 459 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms