RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 GNAI3P08754 354 aa19.69■□□□□ 0.74
EFEMP1-202ENST00000394555 UTP14CQ5TAP6 766 aaKnown RBP19.69■□□□□ 0.74
EFEMP1-202ENST00000394555 U2AF2P26368 475 aaKnown RBP eCLIP19.68■□□□□ 0.74
EFEMP1-202ENST00000394555 RUFY3Q7L099 469 aa19.68■□□□□ 0.74
EFEMP1-202ENST00000394555 SPG7Q9UQ90 795 aa19.68■□□□□ 0.74
EFEMP1-202ENST00000394555 CPS1P31327 1500 aa19.68■□□□□ 0.74
EFEMP1-202ENST00000394555 FLIIQ13045 1269 aa19.68■□□□□ 0.74
EFEMP1-202ENST00000394555 CCDC83Q8IWF9 413 aa19.68■□□□□ 0.74
EFEMP1-202ENST00000394555 DIAPH3Q9NSV4 1193 aa19.68■□□□□ 0.74
EFEMP1-202ENST00000394555 LIMCH1Q9UPQ0 1083 aa19.68■□□□□ 0.74
EFEMP1-202ENST00000394555 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.68■□□□□ 0.74
EFEMP1-202ENST00000394555 CCDC61Q9Y6R9 512 aa19.68■□□□□ 0.74
EFEMP1-202ENST00000394555 VPS37CA5D8V6 355 aaPredicted RBP19.67■□□□□ 0.74
EFEMP1-202ENST00000394555 CWC27Q6UX04 472 aaKnown RBP19.67■□□□□ 0.74
EFEMP1-202ENST00000394555 DDX54Q8TDD1 881 aaKnown RBP19.67■□□□□ 0.74
EFEMP1-202ENST00000394555 STAP2Q9UGK3 403 aa19.67■□□□□ 0.74
EFEMP1-202ENST00000394555 SSH2Q76I76 1423 aa19.67■□□□□ 0.74
EFEMP1-202ENST00000394555 LARGE1O95461 756 aa19.67■□□□□ 0.74
EFEMP1-202ENST00000394555 BCL11BQ9C0K0 894 aaPredicted RBP19.67■□□□□ 0.74
EFEMP1-202ENST00000394555 ATP6V1DQ9Y5K8 247 aa19.67■□□□□ 0.74
EFEMP1-202ENST00000394555 TMEM131LA2VDJ0 1609 aa19.66■□□□□ 0.74
EFEMP1-202ENST00000394555 CASTP20810 708 aaKnown RBP19.66■□□□□ 0.74
EFEMP1-202ENST00000394555 SURF6O75683 361 aaKnown RBP19.66■□□□□ 0.74
EFEMP1-202ENST00000394555 CAMK4Q16566 473 aa19.66■□□□□ 0.74
EFEMP1-202ENST00000394555 GJB2P29033 226 aa19.65■□□□□ 0.74
EFEMP1-202ENST00000394555 MTHFSDQ2M296 383 aaKnown RBP19.65■□□□□ 0.74
EFEMP1-202ENST00000394555 PLEKHG5O94827 1062 aa19.65■□□□□ 0.74
EFEMP1-202ENST00000394555 FUCA2Q9BTY2 467 aa19.65■□□□□ 0.74
EFEMP1-202ENST00000394555 PTGS1P23219 599 aa19.65■□□□□ 0.74
EFEMP1-202ENST00000394555 RAD50Q92878 1312 aa19.64■□□□□ 0.73
EFEMP1-202ENST00000394555 DRC7Q8IY82 874 aa19.64■□□□□ 0.73
EFEMP1-202ENST00000394555 TTC14Q96N46 770 aa19.64■□□□□ 0.73
EFEMP1-202ENST00000394555 CRB1P82279 1406 aa19.64■□□□□ 0.73
EFEMP1-202ENST00000394555 GOLGA6L6A8MZA4 724 aa19.63■□□□□ 0.73
EFEMP1-202ENST00000394555 UBTFL1P0CB47 393 aaPredicted RBP19.63■□□□□ 0.73
EFEMP1-202ENST00000394555 SGSM2O43147 1006 aa19.63■□□□□ 0.73
EFEMP1-202ENST00000394555 CCDC192P0DO97 292 aa19.63■□□□□ 0.73
EFEMP1-202ENST00000394555 FERMT3Q86UX7 667 aa19.62■□□□□ 0.73
EFEMP1-202ENST00000394555 GTPBP4Q9BZE4 634 aaKnown RBP19.62■□□□□ 0.73
EFEMP1-202ENST00000394555 LUZP1Q86V48 1076 aa19.62■□□□□ 0.73
EFEMP1-202ENST00000394555 FAM173BQ6P4H8 233 aa19.61■□□□□ 0.73
EFEMP1-202ENST00000394555 C16orf45Q96MC5 204 aaPredicted RBP19.61■□□□□ 0.73
EFEMP1-202ENST00000394555 LSG1Q9H089 658 aaKnown RBP19.61■□□□□ 0.73
EFEMP1-202ENST00000394555 CKAP2LQ8IYA6 745 aa19.61■□□□□ 0.73
EFEMP1-202ENST00000394555 NECAB1Q8N987 351 aa19.61■□□□□ 0.73
EFEMP1-202ENST00000394555 USP44Q9H0E7 712 aa19.61■□□□□ 0.73
EFEMP1-202ENST00000394555 MTMR6Q9Y217 621 aa19.61■□□□□ 0.73
EFEMP1-202ENST00000394555 LRMPQ12912 555 aa19.6■□□□□ 0.73
EFEMP1-202ENST00000394555 CCDC30Q5VVM6 783 aa19.6■□□□□ 0.73
EFEMP1-202ENST00000394555 PPP1R42Q7Z4L9 355 aa19.6■□□□□ 0.73
EFEMP1-202ENST00000394555 JAKMIP1Q96N16 626 aaKnown RBP19.6■□□□□ 0.73
EFEMP1-202ENST00000394555 MAP3K19Q56UN5 1328 aa19.6■□□□□ 0.73
EFEMP1-202ENST00000394555 IL17RAQ96F46 866 aa19.6■□□□□ 0.73
EFEMP1-202ENST00000394555 TPM3P06753 285 aa19.6■□□□□ 0.73
EFEMP1-202ENST00000394555 CCDC186Q7Z3E2 898 aa19.6■□□□□ 0.73
EFEMP1-202ENST00000394555 SOS1Q07889 1333 aaPredicted RBP19.59■□□□□ 0.73
EFEMP1-202ENST00000394555 CNTROBQ8N137 903 aa19.59■□□□□ 0.73
EFEMP1-202ENST00000394555 PI4K2BQ8TCG2 481 aa19.59■□□□□ 0.73
EFEMP1-202ENST00000394555 HYPKQ9NX55 129 aa19.59■□□□□ 0.73
EFEMP1-202ENST00000394555 ADCK5Q3MIX3 580 aa19.59■□□□□ 0.73
EFEMP1-202ENST00000394555 PRPF40BQ6NWY9 871 aaKnown RBP19.59■□□□□ 0.73
EFEMP1-202ENST00000394555 RHPN1Q8TCX5 695 aa19.59■□□□□ 0.73
EFEMP1-202ENST00000394555 PDRG1Q9NUG6 133 aa19.59■□□□□ 0.73
EFEMP1-202ENST00000394555 NRBP1Q9UHY1 535 aa19.58■□□□□ 0.73
EFEMP1-202ENST00000394555 SRGAP3O43295 1099 aa19.58■□□□□ 0.72
EFEMP1-202ENST00000394555 ANKRD7Q92527 254 aa19.57■□□□□ 0.72
EFEMP1-202ENST00000394555 LIG1P18858 919 aa19.57■□□□□ 0.72
EFEMP1-202ENST00000394555 FAM200AQ8TCP9 573 aa19.57■□□□□ 0.72
EFEMP1-202ENST00000394555 PREX1Q8TCU6 1659 aa19.57■□□□□ 0.72
EFEMP1-202ENST00000394555 NAA30Q147X3 362 aaPredicted RBP19.57■□□□□ 0.72
EFEMP1-202ENST00000394555 MAP3K11Q16584 847 aa19.57■□□□□ 0.72
EFEMP1-202ENST00000394555 NUP62CLQ9H1M0 184 aa19.57■□□□□ 0.72
EFEMP1-202ENST00000394555 DIP2CQ9Y2E4 1556 aa19.56■□□□□ 0.72
EFEMP1-202ENST00000394555 PTH1RQ03431 593 aa19.56■□□□□ 0.72
EFEMP1-202ENST00000394555 TTC21BQ7Z4L5 1316 aa19.56■□□□□ 0.72
EFEMP1-202ENST00000394555 TRIM5Q9C035 493 aa19.56■□□□□ 0.72
EFEMP1-202ENST00000394555 PRR36Q9H6K5 1346 aa19.56■□□□□ 0.72
EFEMP1-202ENST00000394555 TYRO3Q06418 890 aa19.56■□□□□ 0.72
EFEMP1-202ENST00000394555 OS9Q13438 667 aaPredicted RBP19.56■□□□□ 0.72
EFEMP1-202ENST00000394555 LARP1BQ659C4 914 aaKnown RBP19.56■□□□□ 0.72
EFEMP1-202ENST00000394555 TTC6Q86TZ1 520 aa19.56■□□□□ 0.72
EFEMP1-202ENST00000394555 METP08581 1390 aa19.55■□□□□ 0.72
EFEMP1-202ENST00000394555 AOX1Q06278 1338 aa19.55■□□□□ 0.72
EFEMP1-202ENST00000394555 SSH3Q8TE77 659 aa19.55■□□□□ 0.72
EFEMP1-202ENST00000394555 PHAXQ9H814 394 aaKnown RBP19.55■□□□□ 0.72
EFEMP1-202ENST00000394555 MRVI1Q9Y6F6 885 aa19.55■□□□□ 0.72
EFEMP1-202ENST00000394555 GOLGA6L4A6NEF3 574 aa19.55■□□□□ 0.72
EFEMP1-202ENST00000394555 TFIP11Q9UBB9 837 aaKnown RBP19.55■□□□□ 0.72
EFEMP1-202ENST00000394555 CTIFO43310 598 aaKnown RBP19.54■□□□□ 0.72
EFEMP1-202ENST00000394555 KIF20AO95235 890 aa19.54■□□□□ 0.72
EFEMP1-202ENST00000394555 NCBP1Q09161 790 aaKnown RBP19.54■□□□□ 0.72
EFEMP1-202ENST00000394555 ME3Q16798 604 aa19.54■□□□□ 0.72
EFEMP1-202ENST00000394555 ANO6Q4KMQ2 910 aa19.54■□□□□ 0.72
EFEMP1-202ENST00000394555 ZNF592Q92610 1267 aa19.54■□□□□ 0.72
EFEMP1-202ENST00000394555 CYP46A1Q9Y6A2 500 aa19.54■□□□□ 0.72
EFEMP1-202ENST00000394555 TNMDQ9H2S6 317 aa19.54■□□□□ 0.72
EFEMP1-202ENST00000394555 EPB41L2O43491 1005 aaKnown RBP19.54■□□□□ 0.72
EFEMP1-202ENST00000394555 KCNJ4P48050 445 aa19.54■□□□□ 0.72
EFEMP1-202ENST00000394555 ZNF771Q7L3S4 317 aaPredicted RBP19.54■□□□□ 0.72
EFEMP1-202ENST00000394555 DACT1Q9NYF0 836 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms