RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 ZSCAN30Q86W11 494 aa12.72□□□□□ -0.37
ACTN1-203ENST00000394419 NBPF4Q96M43 638 aa12.72□□□□□ -0.37
ACTN1-203ENST00000394419 KIF20BQ96Q89 1820 aa12.71□□□□□ -0.37
ACTN1-203ENST00000394419 G3BP1Q13283 466 aaKnown RBP eCLIP12.71□□□□□ -0.371e-7■■□□□ 12.9
ACTN1-203ENST00000394419 RIC3Q7Z5B4 369 aa12.71□□□□□ -0.37
ACTN1-203ENST00000394419 CCDC83Q8IWF9 413 aa12.71□□□□□ -0.37
ACTN1-203ENST00000394419 JAKMIP1Q96N16 626 aaKnown RBP12.71□□□□□ -0.37
ACTN1-203ENST00000394419 MBD3O95983 291 aa12.71□□□□□ -0.37
ACTN1-203ENST00000394419 PIP4K2AP48426 406 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-203ENST00000394419 RBM10P98175 930 aaKnown RBP12.71□□□□□ -0.37
ACTN1-203ENST00000394419 TCEANC2Q96MN5 208 aa12.71□□□□□ -0.37
ACTN1-203ENST00000394419 MAP3K2Q9Y2U5 619 aa12.71□□□□□ -0.37
ACTN1-203ENST00000394419 ZNF330Q9Y3S2 320 aaPredicted RBP12.71□□□□□ -0.37
ACTN1-203ENST00000394419 RICTORQ6R327 1708 aa12.71□□□□□ -0.38
ACTN1-203ENST00000394419 PLEKHO1Q53GL0 409 aaPredicted RBP12.71□□□□□ -0.38
ACTN1-203ENST00000394419 NLRP2Q9NX02 1062 aa12.71□□□□□ -0.38
ACTN1-203ENST00000394419 ZDHHC9Q9Y397 364 aa12.71□□□□□ -0.38
ACTN1-203ENST00000394419 MAP3K5Q99683 1374 aa12.7□□□□□ -0.38
ACTN1-203ENST00000394419 GOLGA6L4A6NEF3 574 aa12.7□□□□□ -0.38
ACTN1-203ENST00000394419 SOS1Q07889 1333 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-203ENST00000394419 GLIPR1L2Q4G1C9 344 aa12.7□□□□□ -0.38
ACTN1-203ENST00000394419 FERMT3Q86UX7 667 aa12.7□□□□□ -0.38
ACTN1-203ENST00000394419 RUFY2Q8WXA3 655 aa12.7□□□□□ -0.38
ACTN1-203ENST00000394419 ZMYND15Q9H091 742 aa12.7□□□□□ -0.38
ACTN1-203ENST00000394419 NCOA3Q9Y6Q9 1424 aa12.7□□□□□ -0.38
ACTN1-203ENST00000394419 IGSF1Q8N6C5 1336 aa12.7□□□□□ -0.38
ACTN1-203ENST00000394419 ZKSCAN1P17029 563 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-203ENST00000394419 STK3Q13188 491 aa12.7□□□□□ -0.38
ACTN1-203ENST00000394419 BOLA2Q9H3K6 86 aa12.7□□□□□ -0.38
ACTN1-203ENST00000394419 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
ACTN1-203ENST00000394419 WDR33Q9C0J8 1336 aaKnown RBP12.69□□□□□ -0.38
ACTN1-203ENST00000394419 CRB1P82279 1406 aa12.69□□□□□ -0.38
ACTN1-203ENST00000394419 FOSBP53539 338 aa12.69□□□□□ -0.38
ACTN1-203ENST00000394419 HSP90AB4PQ58FF6 505 aa12.69□□□□□ -0.38
ACTN1-203ENST00000394419 TSPY26PQ9H489 355 aa12.69□□□□□ -0.38
ACTN1-203ENST00000394419 FAM13BQ9NYF5 915 aa12.69□□□□□ -0.38
ACTN1-203ENST00000394419 TBX22Q9Y458 520 aa12.69□□□□□ -0.38
ACTN1-203ENST00000394419 GADD45BO75293 160 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-203ENST00000394419 SLC39A6Q13433 755 aa12.69□□□□□ -0.38
ACTN1-203ENST00000394419 FSD1Q9BTV5 496 aa12.69□□□□□ -0.38
ACTN1-203ENST00000394419 USP48Q86UV5 1035 aa12.68□□□□□ -0.38
ACTN1-203ENST00000394419 IL25Q9H293 177 aa12.68□□□□□ -0.38
ACTN1-203ENST00000394419 RAB11FIP3O75154 756 aa12.68□□□□□ -0.38
ACTN1-203ENST00000394419 NECAB1Q8N987 351 aa12.68□□□□□ -0.38
ACTN1-203ENST00000394419 OSBPL3Q9H4L5 887 aa12.68□□□□□ -0.38
ACTN1-203ENST00000394419 CNPY2Q9Y2B0 182 aa12.68□□□□□ -0.38
ACTN1-203ENST00000394419 PRAMEF22A3QJZ6 481 aa12.67□□□□□ -0.38
ACTN1-203ENST00000394419 AK2P54819 239 aa12.67□□□□□ -0.38
ACTN1-203ENST00000394419 KLHDC4Q8TBB5 520 aa12.67□□□□□ -0.38
ACTN1-203ENST00000394419 CDC42BPGQ6DT37 1551 aa12.67□□□□□ -0.38
ACTN1-203ENST00000394419 HTATSF1O43719 755 aaKnown RBP12.67□□□□□ -0.38
ACTN1-203ENST00000394419 PHF14O94880 888 aa12.67□□□□□ -0.38
ACTN1-203ENST00000394419 LRSAM1Q6UWE0 723 aa12.67□□□□□ -0.38
ACTN1-203ENST00000394419 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-203ENST00000394419 DLC1Q96QB1 1528 aa12.67□□□□□ -0.38
ACTN1-203ENST00000394419 RGS12O14924 1447 aa12.67□□□□□ -0.38
ACTN1-203ENST00000394419 IBTKQ9P2D0 1353 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-203ENST00000394419 GLRX3O76003 335 aaKnown RBP12.67□□□□□ -0.38
ACTN1-203ENST00000394419 HSP90B1P14625 803 aaKnown RBP12.67□□□□□ -0.38
ACTN1-203ENST00000394419 NEXNQ0ZGT2 675 aa12.67□□□□□ -0.38
ACTN1-203ENST00000394419 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
ACTN1-203ENST00000394419 PDRG1Q9NUG6 133 aa12.67□□□□□ -0.38
ACTN1-203ENST00000394419 DBF4Q9UBU7 674 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-203ENST00000394419 RASEFQ8IZ41 740 aa12.66□□□□□ -0.38
ACTN1-203ENST00000394419 ZNF830Q96NB3 372 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-203ENST00000394419 A0A0U1RQG5 324 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-203ENST00000394419 DDX58O95786 925 aaKnown RBP12.66□□□□□ -0.38
ACTN1-203ENST00000394419 ZNF445P59923 1031 aa12.66□□□□□ -0.38
ACTN1-203ENST00000394419 EIF4A1P60842 406 aaKnown RBP12.66□□□□□ -0.38
ACTN1-203ENST00000394419 CYP46A1Q9Y6A2 500 aa12.66□□□□□ -0.38
ACTN1-203ENST00000394419 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 SSH3Q8TE77 659 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 RAPGEF4Q8WZA2 1011 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 LIMCH1Q9UPQ0 1083 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 ORAI2Q96SN7 254 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 DNAJC2Q99543 621 aaKnown RBP12.65□□□□□ -0.38
ACTN1-203ENST00000394419 USP25Q9UHP3 1055 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 SNX14Q9Y5W7 946 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 OVOS2A0A0J9YW53 1432 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 OVOS2Q6IE36 1432 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 BRD1O95696 1058 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 ANAPC15P60006 121 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 KIAA2012Q0VF49 1180 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.38
ACTN1-203ENST00000394419 STX6O43752 255 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 PPFIA3O75145 1194 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 ANKRD26Q9UPS8 1709 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 ADAMTS13Q76LX8 1427 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 A0A0G2JS52 829 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 SGSM2O43147 1006 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-203ENST00000394419 ANKLE2Q86XL3 938 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 IP6K1Q92551 441 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 ATP6V1DQ9Y5K8 247 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 CYP2E1P05181 493 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-203ENST00000394419 HCLS1P14317 486 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-203ENST00000394419 GJB2P29033 226 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 DRC7Q8IY82 874 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 ANKRD24Q8TF21 1146 aa12.64□□□□□ -0.39
ACTN1-203ENST00000394419 NDUFB9Q9Y6M9 179 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms