RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 SKOR2Q2VWA4 1001 aaPredicted RBP23.89■■□□□ 1.41
RCCD1-201ENST00000394258 RNMTO43148 476 aaKnown RBP23.88■■□□□ 1.41
RCCD1-201ENST00000394258 ZC3H6P61129 1189 aaKnown RBP23.88■■□□□ 1.41
RCCD1-201ENST00000394258 PROSER3Q2NL68 480 aa23.88■■□□□ 1.41
RCCD1-201ENST00000394258 VSIG10Q8N0Z9 540 aa23.88■■□□□ 1.41
RCCD1-201ENST00000394258 DDX49Q9Y6V7 483 aaKnown RBP23.88■■□□□ 1.41
RCCD1-201ENST00000394258 RHPN1Q8TCX5 695 aa23.87■■□□□ 1.41
RCCD1-201ENST00000394258 STAP2Q9UGK3 403 aa23.87■■□□□ 1.41
RCCD1-201ENST00000394258 PROSER2Q86WR7 435 aaPredicted RBP23.87■■□□□ 1.41
RCCD1-201ENST00000394258 IL25Q9H293 177 aa23.87■■□□□ 1.41
RCCD1-201ENST00000394258 GOLGA6L22H0YM25 854 aa23.87■■□□□ 1.41
RCCD1-201ENST00000394258 FOXD4L5Q5VV16 416 aaPredicted RBP23.87■■□□□ 1.41
RCCD1-201ENST00000394258 KRT28Q7Z3Y7 464 aa23.87■■□□□ 1.41
RCCD1-201ENST00000394258 FOXD4L4Q8WXT5 416 aaPredicted RBP23.87■■□□□ 1.41
RCCD1-201ENST00000394258 PKNOX2Q96KN3 472 aa23.87■■□□□ 1.41
RCCD1-201ENST00000394258 PXDNQ92626 1479 aa23.86■■□□□ 1.41
RCCD1-201ENST00000394258 CYP2E1P05181 493 aaPredicted RBP23.86■■□□□ 1.41
RCCD1-201ENST00000394258 AMOTQ4VCS5 1084 aa23.86■■□□□ 1.41
RCCD1-201ENST00000394258 CLEC17AQ6ZS10 378 aa23.86■■□□□ 1.41
RCCD1-201ENST00000394258 PXDNLA1KZ92 1463 aa23.85■■□□□ 1.41
RCCD1-201ENST00000394258 POLA2Q14181 598 aa23.85■■□□□ 1.41
RCCD1-201ENST00000394258 ZDHHC9Q9Y397 364 aa23.85■■□□□ 1.41
RCCD1-201ENST00000394258 MAP3K2Q9Y2U5 619 aa23.85■■□□□ 1.41
RCCD1-201ENST00000394258 NPHP4O75161 1426 aaPredicted RBP23.84■■□□□ 1.41
RCCD1-201ENST00000394258 HOXB7P09629 217 aa23.84■■□□□ 1.41
RCCD1-201ENST00000394258 NCLP19338 710 aaKnown RBP23.84■■□□□ 1.41
RCCD1-201ENST00000394258 NUCB2P80303 420 aa23.84■■□□□ 1.41
RCCD1-201ENST00000394258 DBF4Q9UBU7 674 aaPredicted RBP23.84■■□□□ 1.41
RCCD1-201ENST00000394258 ADCY9O60503 1353 aa23.84■■□□□ 1.41
RCCD1-201ENST00000394258 OS9Q13438 667 aaPredicted RBP23.84■■□□□ 1.41
RCCD1-201ENST00000394258 DDX17Q92841 729 aaKnown RBP23.84■■□□□ 1.41
RCCD1-201ENST00000394258 CWF19L2Q2TBE0 894 aaKnown RBP23.83■■□□□ 1.41
RCCD1-201ENST00000394258 UPF3BQ9BZI7 483 aaKnown RBP23.83■■□□□ 1.41
RCCD1-201ENST00000394258 GIGYF1O75420 1035 aaPredicted RBP23.83■■□□□ 1.4
RCCD1-201ENST00000394258 AIMP1Q12904 312 aaKnown RBP23.83■■□□□ 1.4
RCCD1-201ENST00000394258 RAB11FIP3O75154 756 aa23.82■■□□□ 1.4
RCCD1-201ENST00000394258 TMX3Q96JJ7 454 aa23.82■■□□□ 1.4
RCCD1-201ENST00000394258 C9orf78Q9NZ63 289 aaPredicted RBP23.82■■□□□ 1.4
RCCD1-201ENST00000394258 MCCP23508 829 aa23.82■■□□□ 1.4
RCCD1-201ENST00000394258 KIF1BPQ96EK5 621 aa23.81■■□□□ 1.4
RCCD1-201ENST00000394258 PTMSP20962 102 aa23.81■■□□□ 1.4
RCCD1-201ENST00000394258 KLHL40Q2TBA0 621 aa23.81■■□□□ 1.4
RCCD1-201ENST00000394258 LMBRD1Q9NUN5 540 aa23.81■■□□□ 1.4
RCCD1-201ENST00000394258 CWC22Q9HCG8 908 aaKnown RBP23.8■■□□□ 1.4
RCCD1-201ENST00000394258 TUBGCP6Q96RT7 1819 aa23.8■■□□□ 1.4
RCCD1-201ENST00000394258 SLC39A6Q13433 755 aa23.8■■□□□ 1.4
RCCD1-201ENST00000394258 PI4K2BQ8TCG2 481 aa23.8■■□□□ 1.4
RCCD1-201ENST00000394258 MED1Q15648 1581 aaPredicted RBP23.8■■□□□ 1.4
RCCD1-201ENST00000394258 PA2G4Q9UQ80 394 aaKnown RBP23.79■■□□□ 1.4
RCCD1-201ENST00000394258 HSP90AA2PQ14568 343 aaPredicted RBP23.79■■□□□ 1.4
RCCD1-201ENST00000394258 CAVIN1Q6NZI2 390 aaKnown RBP23.79■■□□□ 1.4
RCCD1-201ENST00000394258 PRPF40AO75400 957 aaKnown RBP23.78■■□□□ 1.4
RCCD1-201ENST00000394258 NLRP2Q9NX02 1062 aa23.78■■□□□ 1.4
RCCD1-201ENST00000394258 ISY1Q9ULR0 285 aaKnown RBP23.78■■□□□ 1.4
RCCD1-201ENST00000394258 CHMP4AQ9BY43 222 aa23.78■■□□□ 1.4
RCCD1-201ENST00000394258 ZMYND15Q9H091 742 aa23.78■■□□□ 1.4
RCCD1-201ENST00000394258 ERBB4Q15303 1308 aa23.78■■□□□ 1.4
RCCD1-201ENST00000394258 KDM3BQ7LBC6 1761 aa23.77■■□□□ 1.4
RCCD1-201ENST00000394258 KSR2Q6VAB6 950 aa23.77■■□□□ 1.39
RCCD1-201ENST00000394258 CLCN1P35523 988 aa23.76■■□□□ 1.39
RCCD1-201ENST00000394258 RBM27Q9P2N5 1060 aaKnown RBP23.76■■□□□ 1.39
RCCD1-201ENST00000394258 AOX1Q06278 1338 aa23.75■■□□□ 1.39
RCCD1-201ENST00000394258 CWC27Q6UX04 472 aaKnown RBP23.75■■□□□ 1.39
RCCD1-201ENST00000394258 CABLES1Q8TDN4 633 aa23.75■■□□□ 1.39
RCCD1-201ENST00000394258 GLIPR1L2Q4G1C9 344 aa23.75■■□□□ 1.39
RCCD1-201ENST00000394258 LMO7Q8WWI1 1683 aa23.74■■□□□ 1.39
RCCD1-201ENST00000394258 N4BP2Q86UW6 1770 aaPredicted RBP23.74■■□□□ 1.39
RCCD1-201ENST00000394258 MYL6BP14649 208 aa23.74■■□□□ 1.39
RCCD1-201ENST00000394258 GPT2Q8TD30 523 aa23.74■■□□□ 1.39
RCCD1-201ENST00000394258 RAPGEF4Q8WZA2 1011 aa23.74■■□□□ 1.39
RCCD1-201ENST00000394258 ZNF142P52746 1687 aaPredicted RBP23.74■■□□□ 1.39
RCCD1-201ENST00000394258 ERBB3P21860 1342 aa23.74■■□□□ 1.39
RCCD1-201ENST00000394258 SPG7Q9UQ90 795 aa23.73■■□□□ 1.39
RCCD1-201ENST00000394258 CNTROBQ8N137 903 aa23.73■■□□□ 1.39
RCCD1-201ENST00000394258 C19orf44Q9H6X5 657 aa23.73■■□□□ 1.39
RCCD1-201ENST00000394258 NSFL1CQ9UNZ2 370 aaKnown RBP23.73■■□□□ 1.39
RCCD1-201ENST00000394258 ANAPC15P60006 121 aa23.72■■□□□ 1.39
RCCD1-201ENST00000394258 HSP90AB4PQ58FF6 505 aa23.72■■□□□ 1.39
RCCD1-201ENST00000394258 ZSCAN23Q3MJ62 389 aa23.72■■□□□ 1.39
RCCD1-201ENST00000394258 CLASRPQ8N2M8 674 aaKnown RBP23.72■■□□□ 1.39
RCCD1-201ENST00000394258 NFATC2IPQ8NCF5 419 aa23.72■■□□□ 1.39
RCCD1-201ENST00000394258 LARP6Q9BRS8 491 aaKnown RBP23.72■■□□□ 1.39
RCCD1-201ENST00000394258 PIP4K2AP48426 406 aaPredicted RBP23.71■■□□□ 1.39
RCCD1-201ENST00000394258 NASPP49321 788 aaPredicted RBP23.71■■□□□ 1.39
RCCD1-201ENST00000394258 FOXD4L6Q3SYB3 417 aaPredicted RBP23.71■■□□□ 1.39
RCCD1-201ENST00000394258 FOXD4L3Q6VB84 417 aaPredicted RBP23.71■■□□□ 1.39
RCCD1-201ENST00000394258 HYPKQ9NX55 129 aa23.71■■□□□ 1.39
RCCD1-201ENST00000394258 SGSM2O43147 1006 aa23.7■■□□□ 1.39
RCCD1-201ENST00000394258 CSB-PGBD3P0DP91 1061 aa23.7■■□□□ 1.39
RCCD1-201ENST00000394258 HSPA4P34932 840 aa23.7■■□□□ 1.39
RCCD1-201ENST00000394258 SLIT3O75094 1523 aa23.7■■□□□ 1.38
RCCD1-201ENST00000394258 C1orf167Q5SNV9 1468 aa23.7■■□□□ 1.38
RCCD1-201ENST00000394258 ALDH1L1O75891 902 aa23.7■■□□□ 1.38
RCCD1-201ENST00000394258 MCM2P49736 904 aa23.7■■□□□ 1.38
RCCD1-201ENST00000394258 CHRNA2Q15822 529 aa23.7■■□□□ 1.38
RCCD1-201ENST00000394258 SUCLG2Q96I99 432 aa23.7■■□□□ 1.38
RCCD1-201ENST00000394258 RGPD5Q99666 1765 aa23.7■■□□□ 1.38
RCCD1-201ENST00000394258 ZNF790Q6PG37 636 aa23.69■■□□□ 1.38
RCCD1-201ENST00000394258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.69■■□□□ 1.38
RCCD1-201ENST00000394258 NCAPD2Q15021 1401 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms