RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 MAP3K2Q9Y2U5 619 aa22.39■■□□□ 1.18
CLDND1-204ENST00000394185 ADAMTS2O95450 1211 aa22.39■■□□□ 1.17
CLDND1-204ENST00000394185 MYL6BP14649 208 aa22.39■■□□□ 1.17
CLDND1-204ENST00000394185 DDX21Q9NR30 783 aaKnown RBP eCLIP22.39■■□□□ 1.17
CLDND1-204ENST00000394185 NKX1-1Q15270 411 aaPredicted RBP22.38■■□□□ 1.17
CLDND1-204ENST00000394185 C16orf71Q8IYS4 520 aaPredicted RBP22.38■■□□□ 1.17
CLDND1-204ENST00000394185 COL14A1Q05707 1796 aaKnown RBP22.38■■□□□ 1.17
CLDND1-204ENST00000394185 SMARCA5O60264 1052 aaPredicted RBP22.38■■□□□ 1.17
CLDND1-204ENST00000394185 NBPF7P0C2Y1 421 aaPredicted RBP22.38■■□□□ 1.17
CLDND1-204ENST00000394185 HYPKQ9NX55 129 aa22.38■■□□□ 1.17
CLDND1-204ENST00000394185 GLI3P10071 1580 aa22.38■■□□□ 1.17
CLDND1-204ENST00000394185 PHLPP1O60346 1717 aa22.37■■□□□ 1.17
CLDND1-204ENST00000394185 FMNL2Q96PY5 1086 aa22.37■■□□□ 1.17
CLDND1-204ENST00000394185 SNRPA1P09661 255 aaKnown RBP22.36■■□□□ 1.17
CLDND1-204ENST00000394185 UBTFL1P0CB47 393 aaPredicted RBP22.36■■□□□ 1.17
CLDND1-204ENST00000394185 OTUD7AQ8TE49 926 aaPredicted RBP22.36■■□□□ 1.17
CLDND1-204ENST00000394185 KSR2Q6VAB6 950 aa22.35■■□□□ 1.17
CLDND1-204ENST00000394185 ERVV-2B6SEH9 535 aa22.35■■□□□ 1.17
CLDND1-204ENST00000394185 CWF19L2Q2TBE0 894 aaKnown RBP22.35■■□□□ 1.17
CLDND1-204ENST00000394185 HMMRO75330 724 aa22.34■■□□□ 1.17
CLDND1-204ENST00000394185 LRP10Q7Z4F1 713 aa22.34■■□□□ 1.17
CLDND1-204ENST00000394185 EXOC6BQ9Y2D4 811 aa22.34■■□□□ 1.17
CLDND1-204ENST00000394185 TOGARAM1Q9Y4F4 1720 aa22.33■■□□□ 1.17
CLDND1-204ENST00000394185 NUTM2BA6NNL0 878 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-204ENST00000394185 DISP2A7MBM2 1401 aa22.32■■□□□ 1.16
CLDND1-204ENST00000394185 NUTM2EB1AL46 878 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-204ENST00000394185 ATP8B2P98198 1209 aa22.32■■□□□ 1.16
CLDND1-204ENST00000394185 NUTM2AQ8IVF1 878 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-204ENST00000394185 PLEKHM2Q8IWE5 1019 aa22.32■■□□□ 1.16
CLDND1-204ENST00000394185 XAGE3Q8WTP9 111 aa22.32■■□□□ 1.16
CLDND1-204ENST00000394185 PTCD1O75127 700 aaKnown RBP22.32■■□□□ 1.16
CLDND1-204ENST00000394185 COPS6Q7L5N1 327 aa22.32■■□□□ 1.16
CLDND1-204ENST00000394185 TOM1O60784 492 aa22.31■■□□□ 1.16
CLDND1-204ENST00000394185 NOP58Q9Y2X3 529 aaKnown RBP22.31■■□□□ 1.16
CLDND1-204ENST00000394185 KCPQ6ZWJ8 1503 aa22.3■■□□□ 1.16
CLDND1-204ENST00000394185 BMP2KLQ5H9B9 411 aa22.3■■□□□ 1.16
CLDND1-204ENST00000394185 GSPT1P15170 499 aaKnown RBP22.29■■□□□ 1.16
CLDND1-204ENST00000394185 PLCH1Q4KWH8 1693 aa22.28■■□□□ 1.16
CLDND1-204ENST00000394185 PPP1R42Q7Z4L9 355 aa22.28■■□□□ 1.16
CLDND1-204ENST00000394185 RIC3Q7Z5B4 369 aa22.28■■□□□ 1.16
CLDND1-204ENST00000394185 ZBTB47Q9UFB7 747 aaPredicted RBP22.28■■□□□ 1.16
CLDND1-204ENST00000394185 DDX58O95786 925 aaKnown RBP22.28■■□□□ 1.16
CLDND1-204ENST00000394185 IGKV5-2P06315 115 aa22.28■■□□□ 1.16
CLDND1-204ENST00000394185 UBR2Q8IWV8 1755 aa22.28■■□□□ 1.16
CLDND1-204ENST00000394185 PAPPAQ13219 1627 aa22.27■■□□□ 1.16
CLDND1-204ENST00000394185 UBAP1LF5GYI3 381 aa22.27■■□□□ 1.16
CLDND1-204ENST00000394185 NBPF26B4DH59 902 aa22.26■■□□□ 1.15
CLDND1-204ENST00000394185 NBPF14Q5TI25 921 aa22.26■■□□□ 1.15
CLDND1-204ENST00000394185 NBPF10Q6P3W6 841 aaKnown RBP22.26■■□□□ 1.15
CLDND1-204ENST00000394185 NBPF15Q8N660 670 aa22.26■■□□□ 1.15
CLDND1-204ENST00000394185 TMOD3Q9NYL9 352 aa22.26■■□□□ 1.15
CLDND1-204ENST00000394185 LINS1Q8NG48 757 aa22.26■■□□□ 1.15
CLDND1-204ENST00000394185 SSH3Q8TE77 659 aa22.26■■□□□ 1.15
CLDND1-204ENST00000394185 PIGBQ92521 554 aa22.26■■□□□ 1.15
CLDND1-204ENST00000394185 C9orf78Q9NZ63 289 aaPredicted RBP22.26■■□□□ 1.15
CLDND1-204ENST00000394185 TNS2Q63HR2 1409 aa22.25■■□□□ 1.15
CLDND1-204ENST00000394185 ALDH1L1O75891 902 aa22.25■■□□□ 1.15
CLDND1-204ENST00000394185 MFAP1P55081 439 aaKnown RBP22.25■■□□□ 1.15
CLDND1-204ENST00000394185 ASAP1Q9ULH1 1129 aa22.25■■□□□ 1.15
CLDND1-204ENST00000394185 SRGAP3O43295 1099 aa22.25■■□□□ 1.15
CLDND1-204ENST00000394185 SLC4A3P48751 1232 aa22.25■■□□□ 1.15
CLDND1-204ENST00000394185 LAMB4A4D0S4 1761 aa22.25■■□□□ 1.15
CLDND1-204ENST00000394185 IBTKQ9P2D0 1353 aaPredicted RBP22.24■■□□□ 1.15
CLDND1-204ENST00000394185 A1BGP04217 495 aa22.24■■□□□ 1.15
CLDND1-204ENST00000394185 POLA2Q14181 598 aa22.23■■□□□ 1.15
CLDND1-204ENST00000394185 ANKRD13DQ6ZTN6 518 aa22.23■■□□□ 1.15
CLDND1-204ENST00000394185 MYD88Q99836 296 aa22.23■■□□□ 1.15
CLDND1-204ENST00000394185 SPATA31A1Q5TZJ5 1347 aa22.23■■□□□ 1.15
CLDND1-204ENST00000394185 TTC22Q5TAA0 569 aa22.22■■□□□ 1.15
CLDND1-204ENST00000394185 TSHZ3Q63HK5 1081 aa22.22■■□□□ 1.15
CLDND1-204ENST00000394185 NRAPQ86VF7 1730 aa22.22■■□□□ 1.15
CLDND1-204ENST00000394185 TBC1D32Q96NH3 1257 aa22.22■■□□□ 1.15
CLDND1-204ENST00000394185 NEURL1BA8MQ27 555 aa22.22■■□□□ 1.15
CLDND1-204ENST00000394185 GRM8O00222 908 aa22.22■■□□□ 1.15
CLDND1-204ENST00000394185 EXOC5O00471 708 aa22.22■■□□□ 1.15
CLDND1-204ENST00000394185 ERICH6Q7L0X2 663 aa22.22■■□□□ 1.15
CLDND1-204ENST00000394185 KAZALD1Q96I82 304 aa22.22■■□□□ 1.15
CLDND1-204ENST00000394185 METTL22Q9BUU2 404 aaPredicted RBP22.22■■□□□ 1.15
CLDND1-204ENST00000394185 LRRCC1Q9C099 1032 aa22.22■■□□□ 1.15
CLDND1-204ENST00000394185 SUCLG2Q96I99 432 aa22.21■■□□□ 1.15
CLDND1-204ENST00000394185 UPF2Q9HAU5 1272 aaKnown RBP22.21■■□□□ 1.15
CLDND1-204ENST00000394185 SURF6O75683 361 aaKnown RBP22.2■■□□□ 1.14
CLDND1-204ENST00000394185 TBC1D9Q6ZT07 1266 aa22.2■■□□□ 1.14
CLDND1-204ENST00000394185 DDRGK1Q96HY6 314 aa22.2■■□□□ 1.14
CLDND1-204ENST00000394185 ATG3Q9NT62 314 aa22.2■■□□□ 1.14
CLDND1-204ENST00000394185 TTLL7Q6ZT98 887 aa22.19■■□□□ 1.14
CLDND1-204ENST00000394185 JARID2Q92833 1246 aaPredicted RBP22.19■■□□□ 1.14
CLDND1-204ENST00000394185 IL1RAPL2Q9NP60 686 aa22.19■■□□□ 1.14
CLDND1-204ENST00000394185 WNK3Q9BYP7 1800 aa22.19■■□□□ 1.14
CLDND1-204ENST00000394185 UTYO14607 1347 aa22.19■■□□□ 1.14
CLDND1-204ENST00000394185 ATP5J2-PTCD1G3V325 749 aa22.18■■□□□ 1.14
CLDND1-204ENST00000394185 NEXNQ0ZGT2 675 aa22.18■■□□□ 1.14
CLDND1-204ENST00000394185 GCKRQ14397 625 aa22.18■■□□□ 1.14
CLDND1-204ENST00000394185 SYTL4Q96C24 671 aaPredicted RBP22.18■■□□□ 1.14
CLDND1-204ENST00000394185 ITGB4P16144 1822 aa22.18■■□□□ 1.14
CLDND1-204ENST00000394185 SALL3Q9BXA9 1300 aa22.18■■□□□ 1.14
CLDND1-204ENST00000394185 PDE1AP54750 535 aa22.18■■□□□ 1.14
CLDND1-204ENST00000394185 BICC1Q9H694 974 aaKnown RBP22.18■■□□□ 1.14
CLDND1-204ENST00000394185 BCL9O00512 1426 aa22.17■■□□□ 1.14
CLDND1-204ENST00000394185 MTX1Q13505 466 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms