RNA–Protein interactions for RNA: ENST00000393238.7

TMCC1-201, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC1, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-201ENST00000393238 IQCA1Q86XH1 822 aa11.07□□□□□ -0.64
TMCC1-201ENST00000393238 DZIP3Q86Y13 1208 aaKnown RBP11.07□□□□□ -0.64
TMCC1-201ENST00000393238 C22orf23Q9BZE7 217 aa11.07□□□□□ -0.64
TMCC1-201ENST00000393238 RABEP1Q15276 862 aa11.07□□□□□ -0.64
TMCC1-201ENST00000393238 IPO9Q96P70 1041 aaKnown RBP11.07□□□□□ -0.64
TMCC1-201ENST00000393238 SUPT20HQ8NEM7 779 aa11.07□□□□□ -0.64
TMCC1-201ENST00000393238 MAP3K2Q9Y2U5 619 aa11.07□□□□□ -0.64
TMCC1-201ENST00000393238 YEATS2Q9ULM3 1422 aa11.07□□□□□ -0.64
TMCC1-201ENST00000393238 B4DLN1 442 aa11.06□□□□□ -0.64
TMCC1-201ENST00000393238 MRPL12P52815 198 aaKnown RBP11.06□□□□□ -0.64
TMCC1-201ENST00000393238 FLIIQ13045 1269 aa11.06□□□□□ -0.64
TMCC1-201ENST00000393238 AEBP1Q8IUX7 1158 aa11.06□□□□□ -0.64
TMCC1-201ENST00000393238 ZC3H12CQ9C0D7 883 aaKnown RBP11.06□□□□□ -0.64
TMCC1-201ENST00000393238 ZFYVE9O95405 1425 aa11.06□□□□□ -0.64
TMCC1-201ENST00000393238 AMER1Q5JTC6 1135 aaPredicted RBP11.06□□□□□ -0.64
TMCC1-201ENST00000393238 SOS1Q07889 1333 aaPredicted RBP11.06□□□□□ -0.64
TMCC1-201ENST00000393238 RXRBP28702 533 aa11.06□□□□□ -0.64
TMCC1-201ENST00000393238 TNNI2P48788 182 aa11.06□□□□□ -0.64
TMCC1-201ENST00000393238 DCTN1Q14203 1278 aa11.06□□□□□ -0.64
TMCC1-201ENST00000393238 ZSCAN31Q96LW9 406 aaPredicted RBP11.06□□□□□ -0.64
TMCC1-201ENST00000393238 BEGAINQ9BUH8 593 aa11.06□□□□□ -0.64
TMCC1-201ENST00000393238 BCAR3O75815 825 aa11.06□□□□□ -0.64
TMCC1-201ENST00000393238 APBA3O96018 575 aa11.06□□□□□ -0.64
TMCC1-201ENST00000393238 PDE6BP35913 854 aa11.06□□□□□ -0.64
TMCC1-201ENST00000393238 NPHP4O75161 1426 aaPredicted RBP11.05□□□□□ -0.64
TMCC1-201ENST00000393238 GNPATO15228 680 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 PDE4BQ07343 736 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 STIM1Q13586 685 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 SYCP1Q15431 976 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 BLOC1S2Q6QNY1 142 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 HOOK2Q96ED9 719 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 SPINK5Q9NQ38 1064 aaPredicted RBP11.05□□□□□ -0.64
TMCC1-201ENST00000393238 MAGEC2Q9UBF1 373 aaPredicted RBP11.05□□□□□ -0.64
TMCC1-201ENST00000393238 CCDC96Q2M329 555 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 DESP17661 470 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 FOSBP53539 338 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 PARP10Q53GL7 1025 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 CTCFLQ8NI51 663 aaPredicted RBP11.05□□□□□ -0.64
TMCC1-201ENST00000393238 GOLGA6L1Q8N7Z2 621 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 TMEM87AQ8NBN3 555 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 CRNKL1Q9BZJ0 848 aaKnown RBP11.05□□□□□ -0.64
TMCC1-201ENST00000393238 GZF1Q9H116 711 aaPredicted RBP11.05□□□□□ -0.64
TMCC1-201ENST00000393238 PAF1Q8N7H5 531 aa11.05□□□□□ -0.64
TMCC1-201ENST00000393238 PLCG2P16885 1265 aa11.04□□□□□ -0.64
TMCC1-201ENST00000393238 SLFN5Q08AF3 891 aa11.04□□□□□ -0.64
TMCC1-201ENST00000393238 HSP90AB2PQ58FF8 381 aa11.04□□□□□ -0.64
TMCC1-201ENST00000393238 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.04□□□□□ -0.648e-7■■■■■ 177.2
TMCC1-201ENST00000393238 CHMP5Q9NZZ3 219 aa11.04□□□□□ -0.64
TMCC1-201ENST00000393238 ALDH1L1O75891 902 aa11.04□□□□□ -0.64
TMCC1-201ENST00000393238 CDCA7LQ96GN5 454 aa11.04□□□□□ -0.64
TMCC1-201ENST00000393238 SCLT1Q96NL6 688 aa11.04□□□□□ -0.64
TMCC1-201ENST00000393238 STK38Q15208 465 aa11.04□□□□□ -0.64
TMCC1-201ENST00000393238 HMGB1P09429 215 aaKnown RBP11.04□□□□□ -0.64
TMCC1-201ENST00000393238 FAM98CQ17RN3 349 aaKnown RBP11.04□□□□□ -0.64
TMCC1-201ENST00000393238 CCDC12Q8WUD4 166 aaPredicted RBP11.04□□□□□ -0.64
TMCC1-201ENST00000393238 MAST1Q9Y2H9 1570 aa11.03□□□□□ -0.64
TMCC1-201ENST00000393238 MINDY4BA8MYZ0 360 aa11.03□□□□□ -0.64
TMCC1-201ENST00000393238 STK11IPQ8N1F8 1099 aa11.03□□□□□ -0.64
TMCC1-201ENST00000393238 CNBD1Q8NA66 436 aa11.03□□□□□ -0.64
TMCC1-201ENST00000393238 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
TMCC1-201ENST00000393238 THUMPD2Q9BTF0 503 aaKnown RBP11.03□□□□□ -0.64
TMCC1-201ENST00000393238 ATP2B1P20020 1258 aa11.03□□□□□ -0.64
TMCC1-201ENST00000393238 EIF6P56537 245 aaKnown RBP11.03□□□□□ -0.64
TMCC1-201ENST00000393238 FAM13BQ9NYF5 915 aa11.03□□□□□ -0.64
TMCC1-201ENST00000393238 CEP131Q9UPN4 1083 aa11.03□□□□□ -0.64
TMCC1-201ENST00000393238 PDZRN3Q9UPQ7 1066 aa11.03□□□□□ -0.64
TMCC1-201ENST00000393238 CHD1LQ86WJ1 897 aa11.03□□□□□ -0.64
TMCC1-201ENST00000393238 HOXC9P31274 260 aa11.03□□□□□ -0.64
TMCC1-201ENST00000393238 DACH1Q9UI36 760 aa11.03□□□□□ -0.64
TMCC1-201ENST00000393238 H0YIN7 160 aa11.02□□□□□ -0.65
TMCC1-201ENST00000393238 NEK4P51957 841 aa11.02□□□□□ -0.65
TMCC1-201ENST00000393238 FOXD4L6Q3SYB3 417 aaPredicted RBP11.02□□□□□ -0.65
TMCC1-201ENST00000393238 FOXD4L3Q6VB84 417 aaPredicted RBP11.02□□□□□ -0.65
TMCC1-201ENST00000393238 RAB34Q9BZG1 259 aa11.02□□□□□ -0.65
TMCC1-201ENST00000393238 IL1RAPL2Q9NP60 686 aa11.02□□□□□ -0.65
TMCC1-201ENST00000393238 MAP3K5Q99683 1374 aa11.02□□□□□ -0.65
TMCC1-201ENST00000393238 FILIP1LQ4L180 1135 aa11.02□□□□□ -0.65
TMCC1-201ENST00000393238 UBE3BQ7Z3V4 1068 aa11.02□□□□□ -0.65
TMCC1-201ENST00000393238 NAP1L5Q96NT1 182 aaPredicted RBP11.02□□□□□ -0.65
TMCC1-201ENST00000393238 NLRP1Q9C000 1473 aa11.02□□□□□ -0.65
TMCC1-201ENST00000393238 KINO60870 393 aaKnown RBP11.02□□□□□ -0.65
TMCC1-201ENST00000393238 KIF5BP33176 963 aa11.02□□□□□ -0.65
TMCC1-201ENST00000393238 LETM1O95202 739 aaPredicted RBP11.01□□□□□ -0.65
TMCC1-201ENST00000393238 MX1P20591 662 aa11.01□□□□□ -0.65
TMCC1-201ENST00000393238 QTRT2Q9H974 415 aaKnown RBP11.01□□□□□ -0.65
TMCC1-201ENST00000393238 BABAM1Q9NWV8 329 aa11.01□□□□□ -0.65
TMCC1-201ENST00000393238 RBM19Q9Y4C8 960 aaKnown RBP11.01□□□□□ -0.65
TMCC1-201ENST00000393238 PRAG1Q86YV5 1406 aa11.01□□□□□ -0.65
TMCC1-201ENST00000393238 EIF4A2Q14240 407 aaKnown RBP11.01□□□□□ -0.65
TMCC1-201ENST00000393238 LRRFIP2Q9Y608 721 aaKnown RBP11.01□□□□□ -0.65
TMCC1-201ENST00000393238 XAGE3Q8WTP9 111 aa11.01□□□□□ -0.65
TMCC1-201ENST00000393238 PHAXQ9H814 394 aaKnown RBP11.01□□□□□ -0.65
TMCC1-201ENST00000393238 ATP5J2-PTCD1G3V325 749 aa11□□□□□ -0.65
TMCC1-201ENST00000393238 FANCIQ9NVI1 1328 aa11□□□□□ -0.65
TMCC1-201ENST00000393238 SBNO1A3KN83 1393 aa11□□□□□ -0.65
TMCC1-201ENST00000393238 MATR3P43243 847 aaKnown RBP eCLIP11□□□□□ -0.651e-6■■■□□ 17.6
TMCC1-201ENST00000393238 ORAI2Q96SN7 254 aa11□□□□□ -0.65
TMCC1-201ENST00000393238 KSR2Q6VAB6 950 aa11□□□□□ -0.65
TMCC1-201ENST00000393238 PLEKHG1Q9ULL1 1385 aa11□□□□□ -0.65
TMCC1-201ENST00000393238 ZNF213O14771 459 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms