RNA–Protein interactions for RNA: ENST00000391096.1

RNU6-1248P-201, Transcript of RNA, U6 small nuclear 1248, pseudogene, humanhuman

BASIC

Gene RNU6-1248P, Length 64 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1248P-201ENST00000391096 NFATC2IPQ8NCF5 419 aa4.54□□□□□ -1.68
RNU6-1248P-201ENST00000391096 ZCCHC2Q9C0B9 1178 aaKnown RBP4.54□□□□□ -1.68
RNU6-1248P-201ENST00000391096 SCHIP1Q9P0W5 487 aaPredicted RBP4.54□□□□□ -1.68
RNU6-1248P-201ENST00000391096 C21orf2O43822 256 aa4.53□□□□□ -1.68
RNU6-1248P-201ENST00000391096 COL8A1P27658 744 aa4.53□□□□□ -1.68
RNU6-1248P-201ENST00000391096 GTF2IP78347 998 aa4.53□□□□□ -1.68
RNU6-1248P-201ENST00000391096 TNP2Q05952 138 aa4.53□□□□□ -1.68
RNU6-1248P-201ENST00000391096 LINC00114Q6XXX2 140 aa4.53□□□□□ -1.68
RNU6-1248P-201ENST00000391096 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
RNU6-1248P-201ENST00000391096 PRM3Q9NNZ6 103 aa4.53□□□□□ -1.68
RNU6-1248P-201ENST00000391096 A0A1W2PNR3 127 aa4.52□□□□□ -1.69
RNU6-1248P-201ENST00000391096 LBRQ14739 615 aaKnown RBP4.52□□□□□ -1.69
RNU6-1248P-201ENST00000391096 GNASQ5JWF2 1037 aa4.52□□□□□ -1.69
RNU6-1248P-201ENST00000391096 PLEKHM2Q8IWE5 1019 aa4.52□□□□□ -1.69
RNU6-1248P-201ENST00000391096 GAS2L2Q8NHY3 880 aa4.52□□□□□ -1.69
RNU6-1248P-201ENST00000391096 MDFIQ99750 246 aa4.52□□□□□ -1.69
RNU6-1248P-201ENST00000391096 OXCT2Q9BYC2 517 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1248P-201ENST00000391096 USP17L3A6NCW0 530 aa4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 USP17L4A6NCW7 530 aa4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 EML1O00423 815 aa4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 EFSO43281 561 aa4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 MAPTP10636 758 aaKnown RBP4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 TEAD4Q15561 434 aa4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 USP17L2Q6R6M4 530 aa4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 USP17L1Q7RTZ2 530 aa4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 TRIM52Q96A61 297 aa4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 SIRT1Q96EB6 747 aa4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 DCAF5Q96JK2 942 aa4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 NIFKQ9BYG3 293 aaKnown RBP4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 ESF1Q9H501 851 aaKnown RBP4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 SUV39H2Q9H5I1 410 aa4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 LRRC4BQ9NT99 713 aa4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 ATXN7L1Q9ULK2 861 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1248P-201ENST00000391096 ATP9BO43861 1147 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 UBTFP17480 764 aaKnown RBP4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 FGFR3P22607 806 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 FLIIQ13045 1269 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 TMEM132AQ24JP5 1023 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 EML3Q32P44 896 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 FOXR1Q6PIV2 292 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 FCHSD1Q86WN1 690 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 GALNT6Q8NCL4 622 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 EDARADDQ8WWZ3 215 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 AIDAQ96BJ3 306 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 TRERF1Q96PN7 1200 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 TSPAN10Q9H1Z9 355 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 GGA1Q9UJY5 639 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 NOD1Q9Y239 953 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 PCDHGC4Q9Y5F7 938 aa4.5□□□□□ -1.69
RNU6-1248P-201ENST00000391096 KRBA1A5PL33 1030 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 SFI1A8K8P3 1242 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 LZTS3O60299 673 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 PROCP04070 461 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 CD33P20138 364 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 NOS2P35228 1153 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 MAP2K3P46734 347 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 MARSP56192 900 aaKnown RBP4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 COL9A3Q14050 684 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 PLA2G4EQ3MJ16 856 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 KANK4Q5T7N3 995 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 NLRP8Q86W28 1048 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 SLC9A9Q8IVB4 645 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 TPCN2Q8NHX9 752 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 L3MBTL2Q969R5 705 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 ZDHHC3Q9NYG2 299 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 CABP1Q9NZU7 370 aa4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 TFIP11Q9UBB9 837 aaKnown RBP4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 MAFBQ9Y5Q3 323 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 DNMT3AQ9Y6K1 912 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1248P-201ENST00000391096 DCDC2BA2VCK2 349 aa4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 ATXN7O15265 892 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 LGR5O75473 907 aa4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 EPXP11678 715 aa4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 GRNP28799 593 aaKnown RBP4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 CCDC102BQ68D86 513 aa4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 SLCO4C1Q6ZQN7 724 aa4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 SIX5Q8N196 739 aa4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 OGFOD1Q8N543 542 aa4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 TSEN2Q8NCE0 465 aaKnown RBP4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 ZNF280CQ8ND82 737 aa4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 C1orf216Q8TAB5 229 aa4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 GLMNQ92990 594 aa4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 BTBD6Q96KE9 485 aa4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 MKRN1Q9UHC7 482 aaKnown RBP4.48□□□□□ -1.69
RNU6-1248P-201ENST00000391096 NEURL1BA8MQ27 555 aa4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 FAM157BP0CG42 384 aa4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 ARAFP10398 606 aa4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 DGKGP49619 791 aa4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 MAP3K10Q02779 954 aa4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 SFSWAPQ12872 951 aaKnown RBP4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 CRTC2Q53ET0 693 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 EFHC2Q5JST6 749 aa4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 FAM182BQ5T319 152 aa4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 SAMD5Q5TGI4 173 aa4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 GPAT2Q6NUI2 795 aa4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 KANK3Q6NY19 840 aa4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 PROSER2Q86WR7 435 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 SCARF2Q96GP6 870 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 ARXQ96QS3 562 aa4.47□□□□□ -1.69
RNU6-1248P-201ENST00000391096 SLC30A3Q99726 388 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms