RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 PARD3Q8TEW0 1356 aa17.25■□□□□ 0.35
PSME4-201ENST00000389993 ZCRB1Q8TBF4 217 aaKnown RBP17.25■□□□□ 0.35
PSME4-201ENST00000389993 UBAP1LF5GYI3 381 aa17.24■□□□□ 0.35
PSME4-201ENST00000389993 LDHAL6AQ6ZMR3 332 aa17.24■□□□□ 0.35
PSME4-201ENST00000389993 TRMT1LQ7Z2T5 733 aaKnown RBP17.24■□□□□ 0.35
PSME4-201ENST00000389993 ABCC2Q92887 1545 aa17.24■□□□□ 0.35
PSME4-201ENST00000389993 IBSPP21815 317 aaPredicted RBP17.24■□□□□ 0.35
PSME4-201ENST00000389993 RANBP6O60518 1105 aaKnown RBP17.24■□□□□ 0.35
PSME4-201ENST00000389993 HELBQ8NG08 1087 aaPredicted RBP17.24■□□□□ 0.35
PSME4-201ENST00000389993 DHX8Q14562 1220 aaKnown RBP17.24■□□□□ 0.35
PSME4-201ENST00000389993 IMMTQ16891 758 aaKnown RBP17.24■□□□□ 0.35
PSME4-201ENST00000389993 CDK5RAP3Q96JB5 506 aa17.24■□□□□ 0.35
PSME4-201ENST00000389993 ANKRD13DQ6ZTN6 518 aa17.24■□□□□ 0.35
PSME4-201ENST00000389993 ANKRD20A12PQ8NF67 263 aa17.24■□□□□ 0.35
PSME4-201ENST00000389993 RAB11FIP3O75154 756 aa17.23■□□□□ 0.35
PSME4-201ENST00000389993 SSBP05455 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
PSME4-201ENST00000389993 MCM4P33991 863 aa17.23■□□□□ 0.35
PSME4-201ENST00000389993 ATP6V1AP38606 617 aa17.23■□□□□ 0.35
PSME4-201ENST00000389993 FAM43AQ8N2R8 423 aa17.23■□□□□ 0.35
PSME4-201ENST00000389993 MSH6P52701 1360 aa17.23■□□□□ 0.35
PSME4-201ENST00000389993 MRE11P49959 708 aa17.23■□□□□ 0.35
PSME4-201ENST00000389993 MCM2P49736 904 aa17.23■□□□□ 0.35
PSME4-201ENST00000389993 NECAB1Q8N987 351 aa17.23■□□□□ 0.35
PSME4-201ENST00000389993 CWC25Q9NXE8 425 aaPredicted RBP17.23■□□□□ 0.35
PSME4-201ENST00000389993 SKIDA1Q1XH10 827 aa17.22■□□□□ 0.35
PSME4-201ENST00000389993 CADPS2Q86UW7 1296 aa17.22■□□□□ 0.35
PSME4-201ENST00000389993 MAP3K19Q56UN5 1328 aa17.22■□□□□ 0.35
PSME4-201ENST00000389993 PER1O15534 1290 aaPredicted RBP17.22■□□□□ 0.35
PSME4-201ENST00000389993 EPS15P42566 896 aa17.22■□□□□ 0.35
PSME4-201ENST00000389993 TFIP11Q9UBB9 837 aaKnown RBP17.22■□□□□ 0.35
PSME4-201ENST00000389993 PTPRCP08575 1304 aa17.22■□□□□ 0.35
PSME4-201ENST00000389993 WDR33Q9C0J8 1336 aaKnown RBP17.22■□□□□ 0.35
PSME4-201ENST00000389993 ANKRD18BA2A2Z9 1011 aa17.22■□□□□ 0.35
PSME4-201ENST00000389993 HSP90AA2PQ14568 343 aaPredicted RBP17.22■□□□□ 0.35
PSME4-201ENST00000389993 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
PSME4-201ENST00000389993 SEC24BO95487 1268 aa17.22■□□□□ 0.35
PSME4-201ENST00000389993 SDSP20132 328 aa17.22■□□□□ 0.35
PSME4-201ENST00000389993 GCP02774 474 aa17.21■□□□□ 0.35
PSME4-201ENST00000389993 KRT18P05783 430 aaKnown RBP17.21■□□□□ 0.35
PSME4-201ENST00000389993 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
PSME4-201ENST00000389993 F8W031 263 aaPredicted RBP17.21■□□□□ 0.35
PSME4-201ENST00000389993 TRIM22Q8IYM9 498 aa17.21■□□□□ 0.35
PSME4-201ENST00000389993 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
PSME4-201ENST00000389993 POLR3DP05423 398 aaPredicted RBP17.21■□□□□ 0.35
PSME4-201ENST00000389993 HOXC9P31274 260 aa17.21■□□□□ 0.35
PSME4-201ENST00000389993 LGR6Q9HBX8 967 aa17.21■□□□□ 0.35
PSME4-201ENST00000389993 RBM27Q9P2N5 1060 aaKnown RBP17.21■□□□□ 0.35
PSME4-201ENST00000389993 SNRPA1P09661 255 aaKnown RBP17.21■□□□□ 0.35
PSME4-201ENST00000389993 CHST3Q7LGC8 479 aa17.21■□□□□ 0.35
PSME4-201ENST00000389993 RBM10P98175 930 aaKnown RBP17.21■□□□□ 0.34
PSME4-201ENST00000389993 ISM2Q6H9L7 571 aa17.21■□□□□ 0.34
PSME4-201ENST00000389993 NSD2O96028 1365 aa17.2■□□□□ 0.34
PSME4-201ENST00000389993 PDCP20941 246 aa17.2■□□□□ 0.34
PSME4-201ENST00000389993 ZSCAN25Q6NSZ9 544 aa17.2■□□□□ 0.34
PSME4-201ENST00000389993 C6orf229H3BNL8 230 aa17.2■□□□□ 0.34
PSME4-201ENST00000389993 CAVIN4Q5BKX8 364 aa17.2■□□□□ 0.34
PSME4-201ENST00000389993 NAPBQ9H115 298 aa17.2■□□□□ 0.34
PSME4-201ENST00000389993 DZIP1Q86YF9 867 aaKnown RBP17.2■□□□□ 0.34
PSME4-201ENST00000389993 ATP7AQ04656 1500 aa17.2■□□□□ 0.34
PSME4-201ENST00000389993 KRT85P78386 507 aa17.2■□□□□ 0.34
PSME4-201ENST00000389993 ANKRD1Q15327 319 aa17.2■□□□□ 0.34
PSME4-201ENST00000389993 KLHDC4Q8TBB5 520 aa17.2■□□□□ 0.34
PSME4-201ENST00000389993 RSPH6AQ9H0K4 717 aa17.2■□□□□ 0.34
PSME4-201ENST00000389993 NUP160Q12769 1436 aa17.2■□□□□ 0.34
PSME4-201ENST00000389993 MAST1Q9Y2H9 1570 aa17.19■□□□□ 0.34
PSME4-201ENST00000389993 TTC22Q5TAA0 569 aa17.19■□□□□ 0.34
PSME4-201ENST00000389993 ZNF652Q9Y2D9 606 aa17.19■□□□□ 0.34
PSME4-201ENST00000389993 TEX14Q8IWB6 1497 aa17.19■□□□□ 0.34
PSME4-201ENST00000389993 GRPEL1Q9HAV7 217 aa17.19■□□□□ 0.34
PSME4-201ENST00000389993 TMEM132AQ24JP5 1023 aa17.19■□□□□ 0.34
PSME4-201ENST00000389993 RPGRQ92834 1020 aaKnown RBP17.19■□□□□ 0.34
PSME4-201ENST00000389993 SERPINC1P01008 464 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 VAMP4O75379 141 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 IPO7O95373 1038 aaKnown RBP17.18■□□□□ 0.34
PSME4-201ENST00000389993 CHMP4BP1P59074 171 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 NUCB1Q02818 461 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 LMBR1LQ6UX01 489 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 GOLGA6L1Q8N7Z2 621 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 VAT1LQ9HCJ6 419 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 UGGT1Q9NYU2 1555 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 PANK2Q9BZ23 570 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 MKNK2Q9HBH9 465 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 AKAP2Q9Y2D5 859 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 RHPN1Q8TCX5 695 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 ZNF622Q969S3 477 aaKnown RBP eCLIP17.18■□□□□ 0.342e-7■□□□□ 11.3
PSME4-201ENST00000389993 AK7Q96M32 723 aa17.18■□□□□ 0.34
PSME4-201ENST00000389993 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
PSME4-201ENST00000389993 NAT10Q9H0A0 1025 aaKnown RBP17.18■□□□□ 0.34
PSME4-201ENST00000389993 BTG4Q9NY30 223 aa17.17■□□□□ 0.34
PSME4-201ENST00000389993 TNPO1Q92973 898 aaKnown RBP17.17■□□□□ 0.34
PSME4-201ENST00000389993 NDUFB9Q9Y6M9 179 aa17.17■□□□□ 0.34
PSME4-201ENST00000389993 CKAP2LQ8IYA6 745 aa17.17■□□□□ 0.34
PSME4-201ENST00000389993 ZNF213O14771 459 aa17.16■□□□□ 0.34
PSME4-201ENST00000389993 ECM2O94769 699 aaPredicted RBP17.16■□□□□ 0.34
PSME4-201ENST00000389993 SLC5A1P13866 664 aa17.16■□□□□ 0.34
PSME4-201ENST00000389993 RFC4P35249 363 aa17.16■□□□□ 0.34
PSME4-201ENST00000389993 ECHDC1Q9NTX5 307 aa17.16■□□□□ 0.34
PSME4-201ENST00000389993 YEATS2Q9ULM3 1422 aa17.16■□□□□ 0.34
PSME4-201ENST00000389993 MBD3O95983 291 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms