RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 CHMP4AQ9BY43 222 aa18.73■□□□□ 0.59
LRCH1-202ENST00000389797 MIS18AQ9NYP9 233 aa18.73■□□□□ 0.59
LRCH1-202ENST00000389797 HOXC9P31274 260 aa18.72■□□□□ 0.59
LRCH1-202ENST00000389797 EYA1Q99502 592 aa18.72■□□□□ 0.59
LRCH1-202ENST00000389797 CRB1P82279 1406 aa18.72■□□□□ 0.59
LRCH1-202ENST00000389797 ANO2Q9NQ90 1003 aa18.72■□□□□ 0.59
LRCH1-202ENST00000389797 MX1P20591 662 aa18.72■□□□□ 0.59
LRCH1-202ENST00000389797 AMPHP49418 695 aa18.72■□□□□ 0.59
LRCH1-202ENST00000389797 ESCO1Q5FWF5 840 aa18.72■□□□□ 0.59
LRCH1-202ENST00000389797 TSHZ3Q63HK5 1081 aa18.71■□□□□ 0.59
LRCH1-202ENST00000389797 RNF214Q8ND24 703 aa18.71■□□□□ 0.59
LRCH1-202ENST00000389797 STK31Q9BXU1 1019 aa18.71■□□□□ 0.59
LRCH1-202ENST00000389797 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
LRCH1-202ENST00000389797 TRIM6-TRIM34B2RNG4 842 aa18.71■□□□□ 0.59
LRCH1-202ENST00000389797 ORAI2Q96SN7 254 aa18.71■□□□□ 0.59
LRCH1-202ENST00000389797 GNAI3P08754 354 aa18.71■□□□□ 0.58
LRCH1-202ENST00000389797 RILPL2Q969X0 211 aa18.71■□□□□ 0.58
LRCH1-202ENST00000389797 SALL3Q9BXA9 1300 aa18.7■□□□□ 0.58
LRCH1-202ENST00000389797 CHMLP26374 656 aa18.7■□□□□ 0.58
LRCH1-202ENST00000389797 TSPY26PQ9H489 355 aa18.7■□□□□ 0.58
LRCH1-202ENST00000389797 PHRF1Q9P1Y6 1649 aaKnown RBP18.7■□□□□ 0.58
LRCH1-202ENST00000389797 PALD1Q9ULE6 856 aa18.7■□□□□ 0.58
LRCH1-202ENST00000389797 NOL8Q76FK4 1167 aaKnown RBP18.69■□□□□ 0.58
LRCH1-202ENST00000389797 SRCIN1Q9C0H9 1055 aa18.69■□□□□ 0.58
LRCH1-202ENST00000389797 PHF14O94880 888 aa18.69■□□□□ 0.58
LRCH1-202ENST00000389797 MAP7D2Q96T17 732 aa18.69■□□□□ 0.58
LRCH1-202ENST00000389797 FOXO3O43524 673 aa18.68■□□□□ 0.58
LRCH1-202ENST00000389797 PTMAP06454 111 aaKnown RBP18.68■□□□□ 0.58
LRCH1-202ENST00000389797 MTHFSDQ2M296 383 aaKnown RBP18.68■□□□□ 0.58
LRCH1-202ENST00000389797 ATP8B2P98198 1209 aa18.67■□□□□ 0.58
LRCH1-202ENST00000389797 LRRC37A3O60309 1634 aa18.67■□□□□ 0.58
LRCH1-202ENST00000389797 C14orf37Q86TY3 774 aa18.66■□□□□ 0.58
LRCH1-202ENST00000389797 STAP2Q9UGK3 403 aa18.66■□□□□ 0.58
LRCH1-202ENST00000389797 C1orf167Q5SNV9 1468 aa18.66■□□□□ 0.58
LRCH1-202ENST00000389797 WDR33Q9C0J8 1336 aaKnown RBP18.66■□□□□ 0.58
LRCH1-202ENST00000389797 UQCRHLA0A096LP55 91 aa18.66■□□□□ 0.58
LRCH1-202ENST00000389797 UQCRHP07919 91 aa18.66■□□□□ 0.58
LRCH1-202ENST00000389797 PSME1Q06323 249 aa18.66■□□□□ 0.58
LRCH1-202ENST00000389797 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
LRCH1-202ENST00000389797 FAM13BQ9NYF5 915 aa18.66■□□□□ 0.58
LRCH1-202ENST00000389797 SLIT3O75094 1523 aa18.66■□□□□ 0.58
LRCH1-202ENST00000389797 PNMA6EA0A0J9YXQ4 647 aa18.66■□□□□ 0.58
LRCH1-202ENST00000389797 PROSER2Q86WR7 435 aaPredicted RBP18.66■□□□□ 0.58
LRCH1-202ENST00000389797 UPF3BQ9BZI7 483 aaKnown RBP18.66■□□□□ 0.58
LRCH1-202ENST00000389797 KIF1AQ12756 1690 aa18.65■□□□□ 0.58
LRCH1-202ENST00000389797 IL17RAQ96F46 866 aa18.65■□□□□ 0.58
LRCH1-202ENST00000389797 RGPD2P0DJD1 1756 aa18.65■□□□□ 0.58
LRCH1-202ENST00000389797 FLIIQ13045 1269 aa18.65■□□□□ 0.58
LRCH1-202ENST00000389797 EPB41L2O43491 1005 aaKnown RBP18.64■□□□□ 0.58
LRCH1-202ENST00000389797 CCDC30Q5VVM6 783 aa18.64■□□□□ 0.58
LRCH1-202ENST00000389797 FOXD4L6Q3SYB3 417 aaPredicted RBP18.63■□□□□ 0.57
LRCH1-202ENST00000389797 FOXD4L3Q6VB84 417 aaPredicted RBP18.63■□□□□ 0.57
LRCH1-202ENST00000389797 HOMEZQ8IX15 550 aa18.63■□□□□ 0.57
LRCH1-202ENST00000389797 FAM184AQ8NB25 1140 aa18.63■□□□□ 0.57
LRCH1-202ENST00000389797 AOX1Q06278 1338 aa18.62■□□□□ 0.57
LRCH1-202ENST00000389797 DYNC1I1O14576 645 aa18.62■□□□□ 0.57
LRCH1-202ENST00000389797 SASS6Q6UVJ0 657 aa18.62■□□□□ 0.57
LRCH1-202ENST00000389797 USP48Q86UV5 1035 aa18.62■□□□□ 0.57
LRCH1-202ENST00000389797 IP6K1Q92551 441 aa18.62■□□□□ 0.57
LRCH1-202ENST00000389797 GDPD2Q9HCC8 539 aa18.62■□□□□ 0.57
LRCH1-202ENST00000389797 ALS2Q96Q42 1657 aa18.62■□□□□ 0.57
LRCH1-202ENST00000389797 KIAA2012Q0VF49 1180 aa18.61■□□□□ 0.57
LRCH1-202ENST00000389797 C19orf44Q9H6X5 657 aa18.61■□□□□ 0.57
LRCH1-202ENST00000389797 LRRFIP2Q9Y608 721 aaKnown RBP18.61■□□□□ 0.57
LRCH1-202ENST00000389797 MST1RQ04912 1400 aa18.61■□□□□ 0.57
LRCH1-202ENST00000389797 GADD45BO75293 160 aaPredicted RBP18.61■□□□□ 0.57
LRCH1-202ENST00000389797 UNC5CLQ8IV45 518 aa18.61■□□□□ 0.57
LRCH1-202ENST00000389797 UVSSAQ2YD98 709 aa18.61■□□□□ 0.57
LRCH1-202ENST00000389797 TMEM94Q12767 1356 aa18.6■□□□□ 0.57
LRCH1-202ENST00000389797 HSPA4P34932 840 aa18.6■□□□□ 0.57
LRCH1-202ENST00000389797 MTERF4Q7Z6M4 381 aaKnown RBP18.6■□□□□ 0.57
LRCH1-202ENST00000389797 XIRP1Q702N8 1843 aaKnown RBP18.6■□□□□ 0.57
LRCH1-202ENST00000389797 LTV1Q96GA3 475 aaPredicted RBP18.6■□□□□ 0.57
LRCH1-202ENST00000389797 NAP1L2Q9ULW6 460 aaPredicted RBP18.59■□□□□ 0.57
LRCH1-202ENST00000389797 BRD2P25440 801 aaKnown RBP18.59■□□□□ 0.57
LRCH1-202ENST00000389797 TUBGCP6Q96RT7 1819 aa18.59■□□□□ 0.57
LRCH1-202ENST00000389797 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
LRCH1-202ENST00000389797 UBTFL1P0CB47 393 aaPredicted RBP18.59■□□□□ 0.57
LRCH1-202ENST00000389797 HSPA2P54652 639 aa18.59■□□□□ 0.57
LRCH1-202ENST00000389797 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.59■□□□□ 0.57
LRCH1-202ENST00000389797 NECTIN2Q92692 538 aa18.58■□□□□ 0.57
LRCH1-202ENST00000389797 IL1RAPL2Q9NP60 686 aa18.58■□□□□ 0.57
LRCH1-202ENST00000389797 USHBP1Q8N6Y0 703 aa18.58■□□□□ 0.56
LRCH1-202ENST00000389797 KCNH5Q8NCM2 988 aa18.58■□□□□ 0.56
LRCH1-202ENST00000389797 CCDC183Q5T5S1 534 aa18.57■□□□□ 0.56
LRCH1-202ENST00000389797 TMEM87AQ8NBN3 555 aa18.57■□□□□ 0.56
LRCH1-202ENST00000389797 DCCP43146 1447 aa18.57■□□□□ 0.56
LRCH1-202ENST00000389797 SOS1Q07889 1333 aaPredicted RBP18.57■□□□□ 0.56
LRCH1-202ENST00000389797 LETM1O95202 739 aaPredicted RBP18.57■□□□□ 0.56
LRCH1-202ENST00000389797 STRCQ7RTU9 1775 aa18.57■□□□□ 0.56
LRCH1-202ENST00000389797 USP44Q9H0E7 712 aa18.57■□□□□ 0.56
LRCH1-202ENST00000389797 RAB11FIP3O75154 756 aa18.56■□□□□ 0.56
LRCH1-202ENST00000389797 GCP02774 474 aa18.56■□□□□ 0.56
LRCH1-202ENST00000389797 NBPF6Q5VWK0 638 aa18.56■□□□□ 0.56
LRCH1-202ENST00000389797 NBPF4Q96M43 638 aa18.56■□□□□ 0.56
LRCH1-202ENST00000389797 MED1Q15648 1581 aaPredicted RBP18.56■□□□□ 0.56
LRCH1-202ENST00000389797 ARHGEF25Q86VW2 580 aa18.56■□□□□ 0.56
LRCH1-202ENST00000389797 NUTM1Q86Y26 1132 aa18.56■□□□□ 0.56
LRCH1-202ENST00000389797 SSH3Q8TE77 659 aa18.56■□□□□ 0.56
LRCH1-202ENST00000389797 DNTTIP2Q5QJE6 756 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms