RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 RANBP6O60518 1105 aaKnown RBP5.86□□□□□ -1.47
LTN1-202ENST00000389194 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.86□□□□□ -1.471e-6■■□□□ 12.5
LTN1-202ENST00000389194 JAG2Q9Y219 1238 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 ACEP12821 1306 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 RXRAP19793 462 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 PRIM1P49642 420 aaKnown RBP5.86□□□□□ -1.47
LTN1-202ENST00000389194 TTC22Q5TAA0 569 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 DEF6Q9H4E7 631 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 CT47B1P0C2W7 299 aaPredicted RBP5.86□□□□□ -1.47
LTN1-202ENST00000389194 CWF19L2Q2TBE0 894 aaKnown RBP5.86□□□□□ -1.47
LTN1-202ENST00000389194 FILIP1LQ4L180 1135 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 PDCL2Q8N4E4 241 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 MAGEC2Q9UBF1 373 aaPredicted RBP5.86□□□□□ -1.47
LTN1-202ENST00000389194 H0YHG0 523 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 URI1O94763 535 aaPredicted RBP5.86□□□□□ -1.47
LTN1-202ENST00000389194 ANKRD1Q15327 319 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 NOM1Q5C9Z4 860 aaKnown RBP5.86□□□□□ -1.47
LTN1-202ENST00000389194 FAM173BQ6P4H8 233 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 VAT1LQ9HCJ6 419 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 CLIP2Q9UDT6 1046 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 SBNO2Q9Y2G9 1366 aa5.86□□□□□ -1.47
LTN1-202ENST00000389194 NUCB1Q02818 461 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 C17orf53Q8N3J3 647 aaPredicted RBP5.85□□□□□ -1.47
LTN1-202ENST00000389194 STX6O43752 255 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 G2E3Q7L622 706 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 FSIP1Q8NA03 581 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 KLHDC4Q8TBB5 520 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 CIZ1Q9ULV3 898 aaPredicted RBP5.85□□□□□ -1.47
LTN1-202ENST00000389194 GOLGA8BA8MQT2 603 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 MPHOSPH10O00566 681 aaKnown RBP5.85□□□□□ -1.47
LTN1-202ENST00000389194 PPARDQ03181 441 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 DNM1Q05193 864 aaKnown RBP5.85□□□□□ -1.47
LTN1-202ENST00000389194 CEP57L1Q8IYX8 460 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 LIMCH1Q9UPQ0 1083 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 FAM170AA1A519 330 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 C8orf76Q96K31 380 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 TSPYL1Q9H0U9 437 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 CFAP45Q9UL16 551 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 IMMTQ16891 758 aaKnown RBP5.85□□□□□ -1.47
LTN1-202ENST00000389194 ALDH1L2Q3SY69 923 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 USP48Q86UV5 1035 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 CCDC102AQ96A19 550 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 PLCD4Q9BRC7 762 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 PPP6R1Q9UPN7 881 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 TNNT1P13805 278 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 ODF2Q5BJF6 829 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 BMP2KLQ5H9B9 411 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 CCDC183Q5T5S1 534 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 ANKLE2Q86XL3 938 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 TESK2Q96S53 571 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 SRRTQ9BXP5 876 aaKnown RBP5.85□□□□□ -1.47
LTN1-202ENST00000389194 PHAXQ9H814 394 aaKnown RBP5.85□□□□□ -1.47
LTN1-202ENST00000389194 DNMBPQ6XZF7 1577 aa5.85□□□□□ -1.47
LTN1-202ENST00000389194 CHMP4BP1P59074 171 aa5.84□□□□□ -1.47
LTN1-202ENST00000389194 SETQ01105 290 aaPredicted RBP5.84□□□□□ -1.47
LTN1-202ENST00000389194 BRF1Q92994 677 aa5.84□□□□□ -1.47
LTN1-202ENST00000389194 MARCKSP29966 332 aaPredicted RBP5.84□□□□□ -1.47
LTN1-202ENST00000389194 HELBQ8NG08 1087 aaPredicted RBP5.84□□□□□ -1.47
LTN1-202ENST00000389194 NACAP1Q9BZK3 213 aa5.84□□□□□ -1.47
LTN1-202ENST00000389194 TRMT112Q9UI30 125 aaKnown RBP5.84□□□□□ -1.47
LTN1-202ENST00000389194 TXLNAP40222 546 aa5.84□□□□□ -1.47
LTN1-202ENST00000389194 HMGN5P82970 282 aaKnown RBP5.84□□□□□ -1.47
LTN1-202ENST00000389194 TMC6Q7Z403 805 aa5.84□□□□□ -1.47
LTN1-202ENST00000389194 CCAR1Q8IX12 1150 aaKnown RBP5.84□□□□□ -1.47
LTN1-202ENST00000389194 PDE1AP54750 535 aa5.84□□□□□ -1.47
LTN1-202ENST00000389194 TMEM132AQ24JP5 1023 aa5.84□□□□□ -1.47
LTN1-202ENST00000389194 GPIHBP1Q8IV16 184 aa5.84□□□□□ -1.47
LTN1-202ENST00000389194 AK7Q96M32 723 aa5.84□□□□□ -1.47
LTN1-202ENST00000389194 NAPBQ9H115 298 aa5.84□□□□□ -1.47
LTN1-202ENST00000389194 PTPN14Q15678 1187 aa5.84□□□□□ -1.47
LTN1-202ENST00000389194 TAX1BP1Q86VP1 789 aa5.84□□□□□ -1.48
LTN1-202ENST00000389194 PPP4R3BQ5MIZ7 849 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 JMYQ8N9B5 988 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 RHPN1Q8TCX5 695 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 ACSBG1Q96GR2 724 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 UBA5Q9GZZ9 404 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 POLKQ9UBT6 870 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 PHF8Q9UPP1 1060 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 KIAA0586Q9BVV6 1533 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 ADGRL1O94910 1474 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 EIF5P55010 431 aaKnown RBP5.83□□□□□ -1.48
LTN1-202ENST00000389194 LARP1Q6PKG0 1096 aaKnown RBP5.83□□□□□ -1.48
LTN1-202ENST00000389194 SMARCE1Q969G3 411 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 C14orf93Q9H972 538 aaKnown RBP5.83□□□□□ -1.48
LTN1-202ENST00000389194 IFT140Q96RY7 1462 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 CD109Q6YHK3 1445 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 IFIT3O14879 490 aaKnown RBP5.83□□□□□ -1.48
LTN1-202ENST00000389194 MTHFSDQ2M296 383 aaKnown RBP5.83□□□□□ -1.48
LTN1-202ENST00000389194 ECHDC1Q9NTX5 307 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 ZNF213O14771 459 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 SFPQP23246 707 aaKnown RBP eCLIP5.83□□□□□ -1.48
LTN1-202ENST00000389194 ZNF165P49910 485 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 EIF4A2Q14240 407 aaKnown RBP5.83□□□□□ -1.48
LTN1-202ENST00000389194 COPS6Q7L5N1 327 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 MRPL50Q8N5N7 158 aaKnown RBP5.83□□□□□ -1.48
LTN1-202ENST00000389194 ZSCAN31Q96LW9 406 aaPredicted RBP5.83□□□□□ -1.48
LTN1-202ENST00000389194 USP16Q9Y5T5 823 aa5.83□□□□□ -1.48
LTN1-202ENST00000389194 U3KPZ7 1027 aaPredicted RBP5.83□□□□□ -1.48
LTN1-202ENST00000389194 IFIT5Q13325 482 aaKnown RBP5.83□□□□□ -1.48
LTN1-202ENST00000389194 TMOD3Q9NYL9 352 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms