RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 AEBP1Q8IUX7 1158 aa23.93■■□□□ 1.42
HMGN1-203ENST00000380748 CCDC88AQ3V6T2 1871 aa23.93■■□□□ 1.42
HMGN1-203ENST00000380748 NRXN2Q9P2S2 1712 aa23.93■■□□□ 1.42
HMGN1-203ENST00000380748 NFIXQ14938 502 aa23.92■■□□□ 1.42
HMGN1-203ENST00000380748 DNAJC10Q8IXB1 793 aa23.92■■□□□ 1.42
HMGN1-203ENST00000380748 SOS1Q07889 1333 aaPredicted RBP23.91■■□□□ 1.42
HMGN1-203ENST00000380748 POTECB2RU33 542 aa23.91■■□□□ 1.42
HMGN1-203ENST00000380748 NFKBIEO00221 500 aa23.9■■□□□ 1.42
HMGN1-203ENST00000380748 TTLL6Q8N841 843 aa23.89■■□□□ 1.41
HMGN1-203ENST00000380748 SCN11AQ9UI33 1791 aa23.88■■□□□ 1.41
HMGN1-203ENST00000380748 CARMIL3Q8ND23 1372 aa23.88■■□□□ 1.41
HMGN1-203ENST00000380748 C2CD5Q86YS7 1000 aa23.87■■□□□ 1.41
HMGN1-203ENST00000380748 NARFQ9UHQ1 456 aa23.87■■□□□ 1.41
HMGN1-203ENST00000380748 SERPINB2P05120 415 aa23.86■■□□□ 1.41
HMGN1-203ENST00000380748 BCL2L12Q9HB09 334 aa23.86■■□□□ 1.41
HMGN1-203ENST00000380748 COL15A1P39059 1388 aa23.86■■□□□ 1.41
HMGN1-203ENST00000380748 CYP19A1P11511 503 aaPredicted RBP23.85■■□□□ 1.41
HMGN1-203ENST00000380748 MKRN1Q9UHC7 482 aaKnown RBP23.85■■□□□ 1.41
HMGN1-203ENST00000380748 POLR3GLQ9BT43 218 aa23.84■■□□□ 1.41
HMGN1-203ENST00000380748 ZBTB1Q9Y2K1 713 aa23.84■■□□□ 1.41
HMGN1-203ENST00000380748 SULT6B1Q6IMI4 303 aa23.83■■□□□ 1.41
HMGN1-203ENST00000380748 CREBZFQ9NS37 354 aa23.83■■□□□ 1.41
HMGN1-203ENST00000380748 H0YIN7 160 aa23.82■■□□□ 1.4
HMGN1-203ENST00000380748 DPY19L2Q6NUT2 758 aa23.82■■□□□ 1.4
HMGN1-203ENST00000380748 SLC52A2Q9HAB3 445 aa23.82■■□□□ 1.4
HMGN1-203ENST00000380748 SLC39A6Q13433 755 aa23.81■■□□□ 1.4
HMGN1-203ENST00000380748 FOXN1O15353 648 aa23.8■■□□□ 1.4
HMGN1-203ENST00000380748 POTEIP0CG38 1075 aa23.8■■□□□ 1.4
HMGN1-203ENST00000380748 POTEJP0CG39 1038 aa23.8■■□□□ 1.4
HMGN1-203ENST00000380748 CHADLQ6NUI6 762 aa23.8■■□□□ 1.4
HMGN1-203ENST00000380748 LGR6Q9HBX8 967 aa23.8■■□□□ 1.4
HMGN1-203ENST00000380748 ZNF219Q9P2Y4 722 aaPredicted RBP23.8■■□□□ 1.4
HMGN1-203ENST00000380748 DICER1Q9UPY3 1922 aaKnown RBP23.8■■□□□ 1.4
HMGN1-203ENST00000380748 ANKRD31Q8N7Z5 1873 aa23.79■■□□□ 1.4
HMGN1-203ENST00000380748 ERFEQ4G0M1 354 aa23.79■■□□□ 1.4
HMGN1-203ENST00000380748 BICDL1Q6ZP65 573 aa23.79■■□□□ 1.4
HMGN1-203ENST00000380748 MRC1P22897 1456 aa23.79■■□□□ 1.4
HMGN1-203ENST00000380748 AKAP4Q5JQC9 854 aa23.78■■□□□ 1.4
HMGN1-203ENST00000380748 FER1L6Q2WGJ9 1857 aa23.78■■□□□ 1.4
HMGN1-203ENST00000380748 COL11A2P13942 1736 aaPredicted RBP23.77■■□□□ 1.4
HMGN1-203ENST00000380748 C21orf2O43822 256 aa23.77■■□□□ 1.4
HMGN1-203ENST00000380748 ZNF622Q969S3 477 aaKnown RBP eCLIP23.77■■□□□ 1.4
HMGN1-203ENST00000380748 CNTNAP1P78357 1384 aa23.76■■□□□ 1.39
HMGN1-203ENST00000380748 CANXP27824 592 aaKnown RBP23.75■■□□□ 1.39
HMGN1-203ENST00000380748 VIRMAQ69YN4 1812 aaKnown RBP23.75■■□□□ 1.39
HMGN1-203ENST00000380748 RNMTO43148 476 aaKnown RBP23.74■■□□□ 1.39
HMGN1-203ENST00000380748 DDNO94850 711 aaPredicted RBP23.74■■□□□ 1.39
HMGN1-203ENST00000380748 IL13P35225 146 aa23.74■■□□□ 1.39
HMGN1-203ENST00000380748 CCDC24Q8N4L8 307 aa23.74■■□□□ 1.39
HMGN1-203ENST00000380748 PANK3Q9H999 370 aa23.73■■□□□ 1.39
HMGN1-203ENST00000380748 PRDM10Q9NQV6 1147 aa23.73■■□□□ 1.39
HMGN1-203ENST00000380748 TBC1D9BQ66K14 1250 aa23.72■■□□□ 1.39
HMGN1-203ENST00000380748 LTBP3Q9NS15 1303 aa23.71■■□□□ 1.39
HMGN1-203ENST00000380748 MORC1Q86VD1 984 aa23.71■■□□□ 1.39
HMGN1-203ENST00000380748 BRIP1Q9BX63 1249 aa23.71■■□□□ 1.39
HMGN1-203ENST00000380748 TAOK3Q9H2K8 898 aa23.71■■□□□ 1.39
HMGN1-203ENST00000380748 UBR2Q8IWV8 1755 aa23.7■■□□□ 1.39
HMGN1-203ENST00000380748 SCN7AQ01118 1682 aa23.7■■□□□ 1.39
HMGN1-203ENST00000380748 PASKQ96RG2 1323 aa23.7■■□□□ 1.38
HMGN1-203ENST00000380748 PDE6BP35913 854 aa23.7■■□□□ 1.38
HMGN1-203ENST00000380748 EIF5P55010 431 aaKnown RBP23.7■■□□□ 1.38
HMGN1-203ENST00000380748 PRR5LQ6MZQ0 368 aa23.7■■□□□ 1.38
HMGN1-203ENST00000380748 VSIG10Q8N0Z9 540 aa23.7■■□□□ 1.38
HMGN1-203ENST00000380748 CACNA1SQ13698 1873 aa23.68■■□□□ 1.38
HMGN1-203ENST00000380748 SLX4Q8IY92 1834 aa23.68■■□□□ 1.38
HMGN1-203ENST00000380748 CTCFP49711 727 aaPredicted RBP23.68■■□□□ 1.38
HMGN1-203ENST00000380748 VEGFBP49765 207 aa23.68■■□□□ 1.38
HMGN1-203ENST00000380748 AIDAQ96BJ3 306 aa23.68■■□□□ 1.38
HMGN1-203ENST00000380748 PDZRN3Q9UPQ7 1066 aa23.68■■□□□ 1.38
HMGN1-203ENST00000380748 SLC34A2O95436 690 aa23.67■■□□□ 1.38
HMGN1-203ENST00000380748 LDHDQ86WU2 507 aa23.66■■□□□ 1.38
HMGN1-203ENST00000380748 A0A087WZG4 1122 aa23.65■■□□□ 1.38
HMGN1-203ENST00000380748 HMOX1P09601 288 aa23.65■■□□□ 1.38
HMGN1-203ENST00000380748 PRPF40BQ6NWY9 871 aaKnown RBP23.65■■□□□ 1.38
HMGN1-203ENST00000380748 TAF1DQ9H5J8 278 aaPredicted RBP23.65■■□□□ 1.38
HMGN1-203ENST00000380748 IQCA1LA6NCM1 817 aa23.64■■□□□ 1.37
HMGN1-203ENST00000380748 STARD3NLO95772 234 aa23.64■■□□□ 1.37
HMGN1-203ENST00000380748 LBX1P52954 281 aa23.64■■□□□ 1.37
HMGN1-203ENST00000380748 MTHFSDQ2M296 383 aaKnown RBP23.64■■□□□ 1.37
HMGN1-203ENST00000380748 TBC1D2BQ9UPU7 963 aa23.64■■□□□ 1.37
HMGN1-203ENST00000380748 ZNF330Q9Y3S2 320 aaPredicted RBP23.64■■□□□ 1.37
HMGN1-203ENST00000380748 SCN4AP35499 1836 aa23.63■■□□□ 1.37
HMGN1-203ENST00000380748 ARFGEF2Q9Y6D5 1785 aa23.63■■□□□ 1.37
HMGN1-203ENST00000380748 TMEM88BA6NKF7 163 aa23.63■■□□□ 1.37
HMGN1-203ENST00000380748 CNKSR1Q969H4 720 aa23.63■■□□□ 1.37
HMGN1-203ENST00000380748 L3MBTL3Q96JM7 780 aaPredicted RBP23.63■■□□□ 1.37
HMGN1-203ENST00000380748 WBP1LQ9NX94 342 aa23.63■■□□□ 1.37
HMGN1-203ENST00000380748 ITGBL1O95965 494 aaPredicted RBP23.62■■□□□ 1.37
HMGN1-203ENST00000380748 STYK1Q6J9G0 422 aa23.62■■□□□ 1.37
HMGN1-203ENST00000380748 SRGNP10124 158 aa23.61■■□□□ 1.37
HMGN1-203ENST00000380748 TTC5Q8N0Z6 440 aa23.61■■□□□ 1.37
HMGN1-203ENST00000380748 CNBD1Q8NA66 436 aa23.61■■□□□ 1.37
HMGN1-203ENST00000380748 EAPPQ56P03 285 aaPredicted RBP23.6■■□□□ 1.37
HMGN1-203ENST00000380748 ZNF496Q96IT1 587 aaPredicted RBP23.6■■□□□ 1.37
HMGN1-203ENST00000380748 NPHP1O15259 732 aa23.59■■□□□ 1.37
HMGN1-203ENST00000380748 FAM161AQ3B820 660 aa23.59■■□□□ 1.37
HMGN1-203ENST00000380748 SOGA3Q5TF21 947 aa23.59■■□□□ 1.37
HMGN1-203ENST00000380748 ZNF541Q9H0D2 1346 aa23.59■■□□□ 1.37
HMGN1-203ENST00000380748 ADAMTSL1Q8N6G6 1762 aa23.58■■□□□ 1.37
HMGN1-203ENST00000380748 HEG1Q9ULI3 1381 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms