RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 LAMB4A4D0S4 1761 aa31.15■■■□□ 2.58
ECHDC3-201ENST00000379215 SYTL4Q96C24 671 aaPredicted RBP31.15■■■□□ 2.58
ECHDC3-201ENST00000379215 RGS12O14924 1447 aa31.15■■■□□ 2.58
ECHDC3-201ENST00000379215 C5P01031 1676 aa31.15■■■□□ 2.58
ECHDC3-201ENST00000379215 PRIM1P49642 420 aaKnown RBP31.14■■■□□ 2.58
ECHDC3-201ENST00000379215 B4GALNT3Q6L9W6 998 aa31.14■■■□□ 2.58
ECHDC3-201ENST00000379215 FKBP5Q13451 457 aaPredicted RBP31.13■■■□□ 2.57
ECHDC3-201ENST00000379215 TEX13AQ9BXU3 409 aaPredicted RBP31.13■■■□□ 2.57
ECHDC3-201ENST00000379215 DDX21Q9NR30 783 aaKnown RBP eCLIP31.13■■■□□ 2.57
ECHDC3-201ENST00000379215 G2E3Q7L622 706 aa31.13■■■□□ 2.57
ECHDC3-201ENST00000379215 ATG3Q9NT62 314 aa31.13■■■□□ 2.57
ECHDC3-201ENST00000379215 INTS3Q68E01 1043 aaKnown RBP31.12■■■□□ 2.57
ECHDC3-201ENST00000379215 PRAMEF22A3QJZ6 481 aa31.11■■■□□ 2.57
ECHDC3-201ENST00000379215 PXDNLA1KZ92 1463 aa31.1■■■□□ 2.57
ECHDC3-201ENST00000379215 ASAP1Q9ULH1 1129 aa31.1■■■□□ 2.57
ECHDC3-201ENST00000379215 CCT4P50991 539 aaKnown RBP31.09■■■□□ 2.57
ECHDC3-201ENST00000379215 PTCD1O75127 700 aaKnown RBP31.09■■■□□ 2.57
ECHDC3-201ENST00000379215 SEPT12Q8IYM1 358 aa31.08■■■□□ 2.57
ECHDC3-201ENST00000379215 USP16Q9Y5T5 823 aa31.07■■■□□ 2.56
ECHDC3-201ENST00000379215 DDX58O95786 925 aaKnown RBP31.06■■■□□ 2.56
ECHDC3-201ENST00000379215 SMARCC1Q92922 1105 aaPredicted RBP31.06■■■□□ 2.56
ECHDC3-201ENST00000379215 ACSBG1Q96GR2 724 aa31.06■■■□□ 2.56
ECHDC3-201ENST00000379215 PHAXQ9H814 394 aaKnown RBP31.06■■■□□ 2.56
ECHDC3-201ENST00000379215 PDIA6Q15084 440 aa31.04■■■□□ 2.56
ECHDC3-201ENST00000379215 RBM6P78332 1123 aaKnown RBP31.03■■■□□ 2.56
ECHDC3-201ENST00000379215 PELP1Q8IZL8 1130 aaKnown RBP31.02■■■□□ 2.56
ECHDC3-201ENST00000379215 RBM42Q9BTD8 480 aaKnown RBP31.02■■■□□ 2.56
ECHDC3-201ENST00000379215 ZBTB40Q9NUA8 1239 aa31.02■■■□□ 2.56
ECHDC3-201ENST00000379215 STARD3NLO95772 234 aa31.02■■■□□ 2.56
ECHDC3-201ENST00000379215 PROSER3Q2NL68 480 aa31.02■■■□□ 2.56
ECHDC3-201ENST00000379215 ZBTB7BO15156 539 aaPredicted RBP31.01■■■□□ 2.55
ECHDC3-201ENST00000379215 SLC4A10Q6U841 1118 aa31■■■□□ 2.55
ECHDC3-201ENST00000379215 F6X3S4 739 aa30.99■■■□□ 2.55
ECHDC3-201ENST00000379215 ANXA1P04083 346 aa30.99■■■□□ 2.55
ECHDC3-201ENST00000379215 N4BP2Q86UW6 1770 aaPredicted RBP30.99■■■□□ 2.55
ECHDC3-201ENST00000379215 NHSQ6T4R5 1651 aa30.99■■■□□ 2.55
ECHDC3-201ENST00000379215 KSR2Q6VAB6 950 aa30.98■■■□□ 2.55
ECHDC3-201ENST00000379215 DNAAF4Q8WXU2 420 aa30.98■■■□□ 2.55
ECHDC3-201ENST00000379215 ATP10DQ9P241 1426 aa30.97■■■□□ 2.55
ECHDC3-201ENST00000379215 MYL6BP14649 208 aa30.97■■■□□ 2.55
ECHDC3-201ENST00000379215 CENPQQ7L2Z9 268 aaPredicted RBP30.97■■■□□ 2.55
ECHDC3-201ENST00000379215 PALLDQ8WX93 1383 aa30.96■■■□□ 2.55
ECHDC3-201ENST00000379215 KAT6BQ8WYB5 2073 aa30.96■■■□□ 2.55
ECHDC3-201ENST00000379215 PI4KAP2A4QPH2 592 aa30.96■■■□□ 2.55
ECHDC3-201ENST00000379215 PI4KAP1Q8N8J0 262 aa30.96■■■□□ 2.55
ECHDC3-201ENST00000379215 CICQ96RK0 1608 aaPredicted RBP30.95■■■□□ 2.55
ECHDC3-201ENST00000379215 LRP10Q7Z4F1 713 aa30.95■■■□□ 2.55
ECHDC3-201ENST00000379215 DNAJC10Q8IXB1 793 aa30.95■■■□□ 2.55
ECHDC3-201ENST00000379215 ADCY9O60503 1353 aa30.95■■■□□ 2.55
ECHDC3-201ENST00000379215 KCNQ2O43526 872 aa30.94■■■□□ 2.54
ECHDC3-201ENST00000379215 XAGE3Q8WTP9 111 aa30.94■■■□□ 2.54
ECHDC3-201ENST00000379215 SRCIN1Q9C0H9 1055 aa30.93■■■□□ 2.54
ECHDC3-201ENST00000379215 COPS6Q7L5N1 327 aa30.92■■■□□ 2.54
ECHDC3-201ENST00000379215 KRT27Q7Z3Y8 459 aa30.92■■■□□ 2.54
ECHDC3-201ENST00000379215 RWDD1Q9H446 243 aaPredicted RBP30.92■■■□□ 2.54
ECHDC3-201ENST00000379215 KDM2BQ8NHM5 1336 aa30.92■■■□□ 2.54
ECHDC3-201ENST00000379215 LOC102724428A0A0B4J2F2 783 aa30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 SIK1P57059 783 aa30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 MAP3K2Q9Y2U5 619 aa30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 PCDHB15Q9Y5E8 787 aa30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 ZNF831Q5JPB2 1677 aa30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 IBTKQ9P2D0 1353 aaPredicted RBP30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 NBPF26B4DH59 902 aa30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 AIMP1Q12904 312 aaKnown RBP30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 NBPF14Q5TI25 921 aa30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 NBPF10Q6P3W6 841 aaKnown RBP30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 FAM196AQ6ZSG2 479 aa30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 RIC3Q7Z5B4 369 aa30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 NBPF15Q8N660 670 aa30.91■■■□□ 2.54
ECHDC3-201ENST00000379215 A1BGP04217 495 aa30.9■■■□□ 2.54
ECHDC3-201ENST00000379215 GNAI3P08754 354 aa30.9■■■□□ 2.54
ECHDC3-201ENST00000379215 SLC4A9Q96Q91 983 aa30.9■■■□□ 2.54
ECHDC3-201ENST00000379215 TJP1Q07157 1748 aa30.89■■■□□ 2.54
ECHDC3-201ENST00000379215 ALDH1L1O75891 902 aa30.89■■■□□ 2.54
ECHDC3-201ENST00000379215 CYP19A1P11511 503 aaPredicted RBP30.89■■■□□ 2.54
ECHDC3-201ENST00000379215 RXRBP28702 533 aa30.89■■■□□ 2.54
ECHDC3-201ENST00000379215 BEND3Q5T5X7 828 aa30.89■■■□□ 2.54
ECHDC3-201ENST00000379215 ANKRD13DQ6ZTN6 518 aa30.89■■■□□ 2.54
ECHDC3-201ENST00000379215 NEXNQ0ZGT2 675 aa30.88■■■□□ 2.53
ECHDC3-201ENST00000379215 ATP6V1AP38606 617 aa30.87■■■□□ 2.53
ECHDC3-201ENST00000379215 HDAC1Q13547 482 aaPredicted RBP30.87■■■□□ 2.53
ECHDC3-201ENST00000379215 PLBD2Q8NHP8 589 aa30.87■■■□□ 2.53
ECHDC3-201ENST00000379215 LINS1Q8NG48 757 aa30.86■■■□□ 2.53
ECHDC3-201ENST00000379215 MEIS3Q99687 375 aa30.85■■■□□ 2.53
ECHDC3-201ENST00000379215 BCL11BQ9C0K0 894 aaPredicted RBP30.85■■■□□ 2.53
ECHDC3-201ENST00000379215 BTAF1O14981 1849 aa30.84■■■□□ 2.53
ECHDC3-201ENST00000379215 PIP4K2AP48426 406 aaPredicted RBP30.84■■■□□ 2.53
ECHDC3-201ENST00000379215 HDAC5Q9UQL6 1122 aa30.84■■■□□ 2.53
ECHDC3-201ENST00000379215 METTL22Q9BUU2 404 aaPredicted RBP30.84■■■□□ 2.53
ECHDC3-201ENST00000379215 SBF2Q86WG5 1849 aa30.83■■■□□ 2.53
ECHDC3-201ENST00000379215 FAM182BQ5T319 152 aa30.83■■■□□ 2.53
ECHDC3-201ENST00000379215 GNAI2P04899 355 aa30.82■■■□□ 2.52
ECHDC3-201ENST00000379215 NPM2Q86SE8 214 aaKnown RBP30.82■■■□□ 2.52
ECHDC3-201ENST00000379215 IL6STP40189 918 aaPredicted RBP30.81■■■□□ 2.52
ECHDC3-201ENST00000379215 RPAP2Q8IXW5 612 aaPredicted RBP30.81■■■□□ 2.52
ECHDC3-201ENST00000379215 BRWD3Q6RI45 1802 aa30.81■■■□□ 2.52
ECHDC3-201ENST00000379215 IGHDP01880 384 aa30.8■■■□□ 2.52
ECHDC3-201ENST00000379215 KIF6Q6ZMV9 814 aa30.8■■■□□ 2.52
ECHDC3-201ENST00000379215 UBTFL1P0CB47 393 aaPredicted RBP30.8■■■□□ 2.52
ECHDC3-201ENST00000379215 CCDC87Q9NVE4 849 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms