RNA–Protein interactions for RNA: ENST00000378251.2

LRRC47-201, Transcript of leucine rich repeat containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC47, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-201ENST00000378251 LMBR1LQ6UX01 489 aa19.27■□□□□ 0.68
LRRC47-201ENST00000378251 SHROOM2Q13796 1616 aa19.27■□□□□ 0.68
LRRC47-201ENST00000378251 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.27■□□□□ 0.681e-6■■□□□ 11.9
LRRC47-201ENST00000378251 KIAA0232Q92628 1395 aa19.27■□□□□ 0.68
LRRC47-201ENST00000378251 A1BGP04217 495 aa19.27■□□□□ 0.68
LRRC47-201ENST00000378251 ANKIB1Q9P2G1 1089 aa19.27■□□□□ 0.68
LRRC47-201ENST00000378251 HIP1O00291 1037 aa19.27■□□□□ 0.67
LRRC47-201ENST00000378251 GLRX3O76003 335 aaKnown RBP19.27■□□□□ 0.67
LRRC47-201ENST00000378251 ZNF496Q96IT1 587 aaPredicted RBP19.27■□□□□ 0.67
LRRC47-201ENST00000378251 ANKRD18BA2A2Z9 1011 aa19.26■□□□□ 0.67
LRRC47-201ENST00000378251 CHL1O00533 1208 aa19.26■□□□□ 0.67
LRRC47-201ENST00000378251 KCNQ3O43525 872 aa19.26■□□□□ 0.67
LRRC47-201ENST00000378251 IL17REQ8NFR9 667 aa19.26■□□□□ 0.67
LRRC47-201ENST00000378251 GRM8O00222 908 aa19.26■□□□□ 0.67
LRRC47-201ENST00000378251 IFIT1P09914 478 aaKnown RBP19.25■□□□□ 0.67
LRRC47-201ENST00000378251 ARHGEF25Q86VW2 580 aa19.25■□□□□ 0.67
LRRC47-201ENST00000378251 USP21Q9UK80 565 aa19.25■□□□□ 0.67
LRRC47-201ENST00000378251 CLTCL1P53675 1640 aa19.25■□□□□ 0.67
LRRC47-201ENST00000378251 CLSTN1O94985 981 aa19.25■□□□□ 0.67
LRRC47-201ENST00000378251 RBM5P52756 815 aaKnown RBP eCLIP19.25■□□□□ 0.67
LRRC47-201ENST00000378251 NBPF5PQ86XG9 351 aaPredicted RBP19.25■□□□□ 0.67
LRRC47-201ENST00000378251 PA2G4Q9UQ80 394 aaKnown RBP19.25■□□□□ 0.67
LRRC47-201ENST00000378251 NIP7Q9Y221 180 aaKnown RBP eCLIP19.25■□□□□ 0.67
LRRC47-201ENST00000378251 IQGAP3Q86VI3 1631 aa19.25■□□□□ 0.67
LRRC47-201ENST00000378251 TRIM29Q14134 588 aa19.24■□□□□ 0.67
LRRC47-201ENST00000378251 DZIP3Q86Y13 1208 aaKnown RBP19.24■□□□□ 0.67
LRRC47-201ENST00000378251 DRC7Q8IY82 874 aa19.24■□□□□ 0.67
LRRC47-201ENST00000378251 SMARCC1Q92922 1105 aaPredicted RBP19.24■□□□□ 0.67
LRRC47-201ENST00000378251 RAB11FIP3O75154 756 aa19.24■□□□□ 0.67
LRRC47-201ENST00000378251 LINS1Q8NG48 757 aa19.24■□□□□ 0.67
LRRC47-201ENST00000378251 UPF3BQ9BZI7 483 aaKnown RBP19.23■□□□□ 0.67
LRRC47-201ENST00000378251 CHMP5Q9NZZ3 219 aa19.23■□□□□ 0.67
LRRC47-201ENST00000378251 PSMA5P28066 241 aa19.23■□□□□ 0.67
LRRC47-201ENST00000378251 STK3Q13188 491 aa19.23■□□□□ 0.67
LRRC47-201ENST00000378251 DDX21Q9NR30 783 aaKnown RBP eCLIP19.23■□□□□ 0.67
LRRC47-201ENST00000378251 RNF17Q9BXT8 1623 aaKnown RBP19.22■□□□□ 0.67
LRRC47-201ENST00000378251 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
LRRC47-201ENST00000378251 DNAJC10Q8IXB1 793 aa19.22■□□□□ 0.67
LRRC47-201ENST00000378251 SYAP1Q96A49 352 aaPredicted RBP19.22■□□□□ 0.67
LRRC47-201ENST00000378251 ATP2B2Q01814 1243 aa19.22■□□□□ 0.67
LRRC47-201ENST00000378251 AKAP2Q9Y2D5 859 aa19.22■□□□□ 0.67
LRRC47-201ENST00000378251 C6orf229H3BNL8 230 aa19.21■□□□□ 0.67
LRRC47-201ENST00000378251 BRINP3Q76B58 766 aa19.21■□□□□ 0.67
LRRC47-201ENST00000378251 CREBRFQ8IUR6 639 aa19.21■□□□□ 0.67
LRRC47-201ENST00000378251 RPGRQ92834 1020 aaKnown RBP19.21■□□□□ 0.67
LRRC47-201ENST00000378251 ATP6V1DQ9Y5K8 247 aa19.21■□□□□ 0.67
LRRC47-201ENST00000378251 USP6P35125 1406 aa19.21■□□□□ 0.67
LRRC47-201ENST00000378251 FAM182BQ5T319 152 aa19.21■□□□□ 0.67
LRRC47-201ENST00000378251 IQSEC3Q9UPP2 1182 aaPredicted RBP19.21■□□□□ 0.67
LRRC47-201ENST00000378251 SLC52A2Q9HAB3 445 aa19.21■□□□□ 0.67
LRRC47-201ENST00000378251 ATP2B1P20020 1258 aa19.21■□□□□ 0.67
LRRC47-201ENST00000378251 C16orf71Q8IYS4 520 aaPredicted RBP19.21■□□□□ 0.67
LRRC47-201ENST00000378251 KDM5CP41229 1560 aa19.2■□□□□ 0.66
LRRC47-201ENST00000378251 MAP3K4Q9Y6R4 1608 aa19.2■□□□□ 0.66
LRRC47-201ENST00000378251 RHPN1Q8TCX5 695 aa19.2■□□□□ 0.66
LRRC47-201ENST00000378251 SETDB2Q96T68 719 aa19.2■□□□□ 0.66
LRRC47-201ENST00000378251 TFCP2L1Q9NZI6 479 aa19.19■□□□□ 0.66
LRRC47-201ENST00000378251 TDO2P48775 406 aa19.19■□□□□ 0.66
LRRC47-201ENST00000378251 CAVIN4Q5BKX8 364 aa19.19■□□□□ 0.66
LRRC47-201ENST00000378251 CSPP1Q1MSJ5 1256 aa19.19■□□□□ 0.66
LRRC47-201ENST00000378251 ECHDC1Q9NTX5 307 aa19.19■□□□□ 0.66
LRRC47-201ENST00000378251 RABEP1Q15276 862 aa19.19■□□□□ 0.66
LRRC47-201ENST00000378251 ANKRD44Q8N8A2 993 aa19.19■□□□□ 0.66
LRRC47-201ENST00000378251 FAM89AQ96GI7 184 aa19.19■□□□□ 0.66
LRRC47-201ENST00000378251 NACAP1Q9BZK3 213 aa19.19■□□□□ 0.66
LRRC47-201ENST00000378251 IKQ13123 557 aaPredicted RBP19.18■□□□□ 0.66
LRRC47-201ENST00000378251 INSRP06213 1382 aa19.18■□□□□ 0.66
LRRC47-201ENST00000378251 FAM135BQ49AJ0 1406 aa19.18■□□□□ 0.66
LRRC47-201ENST00000378251 HELBQ8NG08 1087 aaPredicted RBP19.18■□□□□ 0.66
LRRC47-201ENST00000378251 JAKMIP1Q96N16 626 aaKnown RBP19.18■□□□□ 0.66
LRRC47-201ENST00000378251 USP16Q9Y5T5 823 aa19.18■□□□□ 0.66
LRRC47-201ENST00000378251 GOLIM4O00461 696 aa19.18■□□□□ 0.66
LRRC47-201ENST00000378251 GNPATO15228 680 aa19.18■□□□□ 0.66
LRRC47-201ENST00000378251 SART3Q15020 963 aaKnown RBP19.18■□□□□ 0.66
LRRC47-201ENST00000378251 ZSCAN29Q8IWY8 852 aaPredicted RBP19.18■□□□□ 0.66
LRRC47-201ENST00000378251 ZNF622Q969S3 477 aaKnown RBP eCLIP19.18■□□□□ 0.66
LRRC47-201ENST00000378251 RTCBQ9Y3I0 505 aaKnown RBP19.18■□□□□ 0.66
LRRC47-201ENST00000378251 CYP46A1Q9Y6A2 500 aa19.18■□□□□ 0.66
LRRC47-201ENST00000378251 DDX46Q7L014 1031 aaKnown RBP19.17■□□□□ 0.66
LRRC47-201ENST00000378251 AIDAQ96BJ3 306 aa19.17■□□□□ 0.66
LRRC47-201ENST00000378251 CTDP1Q9Y5B0 961 aaPredicted RBP19.17■□□□□ 0.66
LRRC47-201ENST00000378251 ALDH1L1O75891 902 aa19.17■□□□□ 0.66
LRRC47-201ENST00000378251 DIP2CQ9Y2E4 1556 aa19.17■□□□□ 0.66
LRRC47-201ENST00000378251 KDM5AP29375 1690 aaKnown RBP19.16■□□□□ 0.66
LRRC47-201ENST00000378251 BLOC1S2Q6QNY1 142 aa19.16■□□□□ 0.66
LRRC47-201ENST00000378251 CDC5LQ99459 802 aaKnown RBP19.16■□□□□ 0.66
LRRC47-201ENST00000378251 CCDC24Q8N4L8 307 aa19.16■□□□□ 0.66
LRRC47-201ENST00000378251 PHKG2P15735 406 aa19.15■□□□□ 0.66
LRRC47-201ENST00000378251 ZSCAN25Q6NSZ9 544 aa19.15■□□□□ 0.66
LRRC47-201ENST00000378251 CCDC34Q96HJ3 373 aa19.15■□□□□ 0.66
LRRC47-201ENST00000378251 ZBTB40Q9NUA8 1239 aa19.15■□□□□ 0.66
LRRC47-201ENST00000378251 PTMSP20962 102 aa19.15■□□□□ 0.66
LRRC47-201ENST00000378251 CCNL1Q9UK58 526 aaPredicted RBP19.15■□□□□ 0.66
LRRC47-201ENST00000378251 SETD1BQ9UPS6 1966 aaKnown RBP19.15■□□□□ 0.66
LRRC47-201ENST00000378251 EIF4A1P60842 406 aaKnown RBP19.15■□□□□ 0.66
LRRC47-201ENST00000378251 NLRP3Q96P20 1036 aa19.15■□□□□ 0.66
LRRC47-201ENST00000378251 UNC13BO14795 1591 aa19.15■□□□□ 0.66
LRRC47-201ENST00000378251 BICD2Q8TD16 824 aa19.14■□□□□ 0.66
LRRC47-201ENST00000378251 MINDY4BA8MYZ0 360 aa19.14■□□□□ 0.65
LRRC47-201ENST00000378251 ATP8B2P98198 1209 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms