RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 NBPF4Q96M43 638 aa22.12■■□□□ 1.13
TDP2-202ENST00000378198 IL1RAPL2Q9NP60 686 aa22.12■■□□□ 1.13
TDP2-202ENST00000378198 EIF2S2P20042 333 aaKnown RBP22.11■■□□□ 1.13
TDP2-202ENST00000378198 KCNH5Q8NCM2 988 aa22.11■■□□□ 1.13
TDP2-202ENST00000378198 RHPN1Q8TCX5 695 aa22.11■■□□□ 1.13
TDP2-202ENST00000378198 KIF1BPQ96EK5 621 aa22.11■■□□□ 1.13
TDP2-202ENST00000378198 ADGRL3Q9HAR2 1447 aa22.11■■□□□ 1.13
TDP2-202ENST00000378198 DNAAF4Q8WXU2 420 aa22.1■■□□□ 1.13
TDP2-202ENST00000378198 LGR6Q9HBX8 967 aa22.1■■□□□ 1.13
TDP2-202ENST00000378198 BEND3Q5T5X7 828 aa22.1■■□□□ 1.13
TDP2-202ENST00000378198 NUTM1Q86Y26 1132 aa22.1■■□□□ 1.13
TDP2-202ENST00000378198 BRD1O95696 1058 aa22.09■■□□□ 1.13
TDP2-202ENST00000378198 HSP90AB4PQ58FF6 505 aa22.09■■□□□ 1.13
TDP2-202ENST00000378198 AKAP4Q5JQC9 854 aa22.09■■□□□ 1.13
TDP2-202ENST00000378198 SRGAP3O43295 1099 aa22.08■■□□□ 1.13
TDP2-202ENST00000378198 HSPA4P34932 840 aa22.08■■□□□ 1.13
TDP2-202ENST00000378198 CHPF2Q9P2E5 772 aa22.08■■□□□ 1.13
TDP2-202ENST00000378198 PI4K2BQ8TCG2 481 aa22.08■■□□□ 1.12
TDP2-202ENST00000378198 GPT2Q8TD30 523 aa22.08■■□□□ 1.12
TDP2-202ENST00000378198 CRYBG1Q9Y4K1 1723 aa22.07■■□□□ 1.12
TDP2-202ENST00000378198 NBPF7P0C2Y1 421 aaPredicted RBP22.07■■□□□ 1.12
TDP2-202ENST00000378198 TEFQ10587 303 aa22.07■■□□□ 1.12
TDP2-202ENST00000378198 PLEKHO1Q53GL0 409 aaPredicted RBP22.07■■□□□ 1.12
TDP2-202ENST00000378198 ERBB4Q15303 1308 aa22.07■■□□□ 1.12
TDP2-202ENST00000378198 PI4KAP2A4QPH2 592 aa22.07■■□□□ 1.12
TDP2-202ENST00000378198 PSME1Q06323 249 aa22.07■■□□□ 1.12
TDP2-202ENST00000378198 PI4KAP1Q8N8J0 262 aa22.07■■□□□ 1.12
TDP2-202ENST00000378198 CNTROBQ8N137 903 aa22.06■■□□□ 1.12
TDP2-202ENST00000378198 BTBD11A6QL63 1104 aa22.05■■□□□ 1.12
TDP2-202ENST00000378198 MBD3O95983 291 aa22.05■■□□□ 1.12
TDP2-202ENST00000378198 NCAPD2Q15021 1401 aa22.05■■□□□ 1.12
TDP2-202ENST00000378198 AMOTQ4VCS5 1084 aa22.05■■□□□ 1.12
TDP2-202ENST00000378198 ZNF530Q6P9A1 599 aaPredicted RBP22.05■■□□□ 1.12
TDP2-202ENST00000378198 OVOS2A0A0G2JMS6 1433 aa22.04■■□□□ 1.12
TDP2-202ENST00000378198 ANKLE2Q86XL3 938 aa22.04■■□□□ 1.12
TDP2-202ENST00000378198 SGSM2O43147 1006 aa22.03■■□□□ 1.12
TDP2-202ENST00000378198 KCNQ3O43525 872 aa22.03■■□□□ 1.12
TDP2-202ENST00000378198 IL25Q9H293 177 aa22.03■■□□□ 1.12
TDP2-202ENST00000378198 DBF4Q9UBU7 674 aaPredicted RBP22.03■■□□□ 1.12
TDP2-202ENST00000378198 ADCY9O60503 1353 aa22.03■■□□□ 1.12
TDP2-202ENST00000378198 RAD50Q92878 1312 aa22.03■■□□□ 1.12
TDP2-202ENST00000378198 USP42Q9H9J4 1324 aaKnown RBP22.03■■□□□ 1.12
TDP2-202ENST00000378198 ZNF142P52746 1687 aaPredicted RBP22.03■■□□□ 1.12
TDP2-202ENST00000378198 TTC41PQ6P2S7 1318 aa22.02■■□□□ 1.12
TDP2-202ENST00000378198 MTX1Q13505 466 aa22.02■■□□□ 1.12
TDP2-202ENST00000378198 ESCO1Q5FWF5 840 aa22.02■■□□□ 1.12
TDP2-202ENST00000378198 UPF3BQ9BZI7 483 aaKnown RBP22.02■■□□□ 1.12
TDP2-202ENST00000378198 PLEKHG5O94827 1062 aa22.02■■□□□ 1.11
TDP2-202ENST00000378198 NOL8Q76FK4 1167 aaKnown RBP22.02■■□□□ 1.11
TDP2-202ENST00000378198 HDAC5Q9UQL6 1122 aa22.02■■□□□ 1.11
TDP2-202ENST00000378198 ZBTB7CA1YPR0 619 aa22.01■■□□□ 1.11
TDP2-202ENST00000378198 RNMTO43148 476 aaKnown RBP22.01■■□□□ 1.11
TDP2-202ENST00000378198 ALDH1L1O75891 902 aa22.01■■□□□ 1.11
TDP2-202ENST00000378198 MAP4K4O95819 1239 aaPredicted RBP22.01■■□□□ 1.11
TDP2-202ENST00000378198 PRIM1P49642 420 aaKnown RBP22.01■■□□□ 1.11
TDP2-202ENST00000378198 FOXD4L5Q5VV16 416 aaPredicted RBP22.01■■□□□ 1.11
TDP2-202ENST00000378198 LRSAM1Q6UWE0 723 aa22.01■■□□□ 1.11
TDP2-202ENST00000378198 FOXD4L4Q8WXT5 416 aaPredicted RBP22.01■■□□□ 1.11
TDP2-202ENST00000378198 RBSNQ9H1K0 784 aa22.01■■□□□ 1.11
TDP2-202ENST00000378198 RBM27Q9P2N5 1060 aaKnown RBP22.01■■□□□ 1.11
TDP2-202ENST00000378198 SIPA1L3O60292 1781 aaPredicted RBP22.01■■□□□ 1.11
TDP2-202ENST00000378198 C1orf141Q5JVX7 400 aa22■■□□□ 1.11
TDP2-202ENST00000378198 MPRIPQ6WCQ1 1025 aa22■■□□□ 1.11
TDP2-202ENST00000378198 LRRC59Q96AG4 307 aaKnown RBP22■■□□□ 1.11
TDP2-202ENST00000378198 NAP1L5Q96NT1 182 aaPredicted RBP22■■□□□ 1.11
TDP2-202ENST00000378198 TMEM63CQ9P1W3 806 aa22■■□□□ 1.11
TDP2-202ENST00000378198 SLIT3O75094 1523 aa22■■□□□ 1.11
TDP2-202ENST00000378198 CAMTA1Q9Y6Y1 1673 aa22■■□□□ 1.11
TDP2-202ENST00000378198 GLRX3O76003 335 aaKnown RBP21.99■■□□□ 1.11
TDP2-202ENST00000378198 LSG1Q9H089 658 aaKnown RBP21.99■■□□□ 1.11
TDP2-202ENST00000378198 KIAA1211Q6ZU35 1233 aa21.99■■□□□ 1.11
TDP2-202ENST00000378198 CHAMP1Q96JM3 812 aa21.99■■□□□ 1.11
TDP2-202ENST00000378198 SNX14Q9Y5W7 946 aa21.99■■□□□ 1.11
TDP2-202ENST00000378198 WDR33Q9C0J8 1336 aaKnown RBP21.98■■□□□ 1.11
TDP2-202ENST00000378198 ANXA1P04083 346 aa21.98■■□□□ 1.11
TDP2-202ENST00000378198 OS9Q13438 667 aaPredicted RBP21.98■■□□□ 1.11
TDP2-202ENST00000378198 HS1BP3Q53T59 392 aa21.97■■□□□ 1.11
TDP2-202ENST00000378198 KSR2Q6VAB6 950 aa21.97■■□□□ 1.11
TDP2-202ENST00000378198 ARHGEF25Q86VW2 580 aa21.97■■□□□ 1.11
TDP2-202ENST00000378198 ZSCAN30Q86W11 494 aa21.97■■□□□ 1.11
TDP2-202ENST00000378198 CLASRPQ8N2M8 674 aaKnown RBP21.97■■□□□ 1.11
TDP2-202ENST00000378198 NSFL1CQ9UNZ2 370 aaKnown RBP21.97■■□□□ 1.11
TDP2-202ENST00000378198 HEG1Q9ULI3 1381 aa21.97■■□□□ 1.11
TDP2-202ENST00000378198 GIGYF1O75420 1035 aaPredicted RBP21.97■■□□□ 1.11
TDP2-202ENST00000378198 RUFY2Q8WXA3 655 aa21.97■■□□□ 1.11
TDP2-202ENST00000378198 MAP3K2Q9Y2U5 619 aa21.97■■□□□ 1.11
TDP2-202ENST00000378198 PXDNQ92626 1479 aa21.96■■□□□ 1.11
TDP2-202ENST00000378198 GCP02774 474 aa21.96■■□□□ 1.11
TDP2-202ENST00000378198 ERC1Q8IUD2 1116 aa21.96■■□□□ 1.11
TDP2-202ENST00000378198 C9orf78Q9NZ63 289 aaPredicted RBP21.96■■□□□ 1.11
TDP2-202ENST00000378198 TCHHQ07283 1943 aa21.96■■□□□ 1.11
TDP2-202ENST00000378198 SYCE3A1L190 88 aa21.95■■□□□ 1.11
TDP2-202ENST00000378198 RBM33Q96EV2 1170 aaKnown RBP21.95■■□□□ 1.11
TDP2-202ENST00000378198 PDLIM2Q96JY6 352 aa21.95■■□□□ 1.11
TDP2-202ENST00000378198 TTC14Q96N46 770 aa21.95■■□□□ 1.11
TDP2-202ENST00000378198 CWC27Q6UX04 472 aaKnown RBP21.95■■□□□ 1.1
TDP2-202ENST00000378198 SYAP1Q96A49 352 aaPredicted RBP21.95■■□□□ 1.1
TDP2-202ENST00000378198 GPATCH3Q96I76 525 aa21.95■■□□□ 1.1
TDP2-202ENST00000378198 ADAMTS7Q9UKP4 1686 aa21.95■■□□□ 1.1
TDP2-202ENST00000378198 LMTK3Q96Q04 1460 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms